BLASTX nr result

ID: Coptis25_contig00032607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032607
         (675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74986.1| hypothetical protein VITISV_008771 [Vitis vinifera]    79   8e-13
gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold ...    79   8e-13
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    77   2e-12
emb|CAN64449.1| hypothetical protein VITISV_008912 [Vitis vinifera]    77   2e-12
emb|CAN72177.1| hypothetical protein VITISV_012537 [Vitis vinifera]    77   4e-12

>emb|CAN74986.1| hypothetical protein VITISV_008771 [Vitis vinifera]
          Length = 1971

 Score = 79.0 bits (193), Expect = 8e-13
 Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 15/212 (7%)
 Frame = +3

Query: 84   IWPGIKWVLPEISSRAQWILGSGEKVDLWRDCWIGEQSIQHRLQLQPEVLKGCKAKVSSI 263
            +W  I+     + ++  +++G+G +V  W+D W G  ++ +            +A V   
Sbjct: 1220 LWKEIRKEGALMQNKVAFVVGNGRRVKFWKDIWWGNLALCNSFPSLYAFAXSKEAWVEEY 1279

Query: 264  ----ISDGAWS-----------ISRALQVILMIAGFNLNQLPIINGANHAIWKPDQQGQF 398
                  +GAWS           +    +++L I G  L  L      +  +WK +  G F
Sbjct: 1280 WDTSXGEGAWSPRFSRPFNDWEVEEVERLLLTIRGARLXPLM----EDRMMWKANXNGIF 1335

Query: 399  SVQSAFETIRRRAPGSWWCKHLWHNWLQPKISGTAWKLLRNCAATDESLQKRGVKLVFRC 578
            SV+S +  +  R  G +    +W+  +  K+S  AW+       T + L+KRG  +  RC
Sbjct: 1336 SVKSLYNDLFSRRAGJFPHGLIWNPXVPSKVSFFAWEASWGKVLTMDQLKKRGWXVANRC 1395

Query: 579  YMGCNAADTLQHILWDCTEAKKLWEWAGFQFG 674
            ++ C   +++ HIL  C++A+ LWE     FG
Sbjct: 1396 FLCCEEEESIDHILIHCSKARALWELLFALFG 1427


>gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 424

 Score = 79.0 bits (193), Expect = 8e-13
 Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 15/207 (7%)
 Frame = +3

Query: 78  STIWPGIKWVLPEISSRAQWILGSGEKVDLWRDCWIGEQSIQHRLQLQPEV---LKGCKA 248
           S +W G+  V   +    QW +G+GE + +W   W+G        QL P         + 
Sbjct: 80  SYVWRGLWRVKDMVRRSFQWSIGTGESISVWHQLWLGNHE-----QLTPVTELHSMWSEL 134

Query: 249 KVSSIISDGA--WSISRALQVILMIAGFNLNQLPIINGANH--AIWKPDQQGQFSVQSAF 416
           +V++++   A  W+ S    V        + + P++       A W+ ++ G +S++SA+
Sbjct: 135 RVANLLQVNAKQWNKSFINYVFDTGTAEQIYKTPLLPSVQQDIATWRFEKDGNYSIRSAY 194

Query: 417 ETI--------RRRAPGSWWCKHLWHNWLQPKISGTAWKLLRNCAATDESLQKRGVKLVF 572
             I        + R  GSW    +W+  L PK+    W+  RNC  T   LQ RGV+   
Sbjct: 195 CDILNNNTALNQHRVNGSW--NSIWNLKLPPKVKNFMWRACRNCLPTRVKLQSRGVQCPM 252

Query: 573 RCYMGCNAADTLQHILWDCTEAKKLWE 653
            C +     +   H+ +DC ++   W+
Sbjct: 253 DCAVYAGPYEDSSHLFFDCGKSISCWQ 279


>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 42/179 (23%), Positives = 81/179 (45%), Gaps = 3/179 (1%)
 Frame = +3

Query: 129 AQWILGSGEKVDLWRDCWIGEQSIQHRLQLQPEVLKGCKAKVSSIISDGAWSISRALQV- 305
           ++W+LG+G  +  W D W GE  +   L +  ++ +     V   I +  W I + + V 
Sbjct: 4   SKWLLGNGRLIKFWEDAWCGEP-LHETLNVNQDIYREYPQFVHDYIQNFRWHIPQTILVH 62

Query: 306 --ILMIAGFNLNQLPIINGANHAIWKPDQQGQFSVQSAFETIRRRAPGSWWCKHLWHNWL 479
              L +    +  +P+ +  +  IW  +  G   ++ ++    +      W K +W   +
Sbjct: 63  YPALKLLAEKVT-IPMEDKEDKLIWNHNSNGDLMMRDSYAFKNQPVNTHNWAKLIWSKDI 121

Query: 480 QPKISGTAWKLLRNCAATDESLQKRGVKLVFRCYMGCNAADTLQHILWDCTEAKKLWEW 656
            P  S   W+L+ +   TDE LQ+RG +L   C +     +T  H+ ++C  A ++W W
Sbjct: 122 PPSKSILTWRLIHDKVPTDEKLQQRGCQLPSMCSLCGTHVETSFHLFFECCFAFRIWCW 180


>emb|CAN64449.1| hypothetical protein VITISV_008912 [Vitis vinifera]
          Length = 496

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 15/211 (7%)
 Frame = +3

Query: 87  WPGIKWVLPEISSRAQWILGSGEKVDLWRDCWIGEQSIQHRLQLQPEVLKGCKAKVSSII 266
           W  I+     + ++  + +G+G +V  W+D W G  ++ +       +    +A V    
Sbjct: 198 WKEIRKEGALLQNKVVFSVGNGRRVKFWKDIWWGNFALCNYFPSLYAIASSKEAWVEEFW 257

Query: 267 S----DGAWS-----------ISRALQVILMIAGFNLNQLPIINGANHAIWKPDQQGQFS 401
                +G WS           +    +++L I G  L  +P++   +  +WK    G FS
Sbjct: 258 DTSGEEGVWSPRFSRPFNDWEVEEVERLLLTIRGARL--IPLME--DRMMWKVTSNGIFS 313

Query: 402 VQSAFETIRRRAPGSWWCKHLWHNWLQPKISGTAWKLLRNCAATDESLQKRGVKLVFRCY 581
           V+S +  +  R  G +    +W   +  K+S  AWK       T + L+KRG  L  RC+
Sbjct: 314 VKSLYNDLSSRRAGPFPHGLIWSPSVPSKVSFFAWKASWGKVLTMDQLKKRGWALANRCF 373

Query: 582 MGCNAADTLQHILWDCTEAKKLWEWAGFQFG 674
           + C   +++ HIL  C+ A+ LWE     FG
Sbjct: 374 LCCEEEESIDHILIHCSRARALWELLFALFG 404


>emb|CAN72177.1| hypothetical protein VITISV_012537 [Vitis vinifera]
          Length = 491

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 15/193 (7%)
 Frame = +3

Query: 141 LGSGEKVDLWRDCWIGEQSIQHRLQLQPEVLKGCKAKVSSIISD---------------G 275
           +G G++V  W+D W G   +        ++     AKV+                     
Sbjct: 259 VGDGKRVRFWKDNWCGNTPLCEAYPSLFDLAVSKDAKVADCWDSMGEVGGWNPRFLRPFN 318

Query: 276 AWSISRALQVILMIAGFNLNQLPIINGANHAIWKPDQQGQFSVQSAFETIRRRAPGSWWC 455
            W +      +L+I G  LN     +  +  +WK  + G FSV+S F ++   +   +  
Sbjct: 319 DWEVEEVESFLLIIQGKRLNA----DLEDRMVWKETKDGIFSVKSCFNSLDHSSAVPFPW 374

Query: 456 KHLWHNWLQPKISGTAWKLLRNCAATDESLQKRGVKLVFRCYMGCNAADTLQHILWDCTE 635
           + +W +++  K+   AW+       T + L++RG KL  RC + C+  +T+ HIL  C +
Sbjct: 375 RIIWSSFVPSKVGFFAWEASWGKVLTQDQLKRRGWKLANRCPLCCDEEETINHILIHCPK 434

Query: 636 AKKLWEWAGFQFG 674
           AK LW+     FG
Sbjct: 435 AKVLWDLLFSLFG 447


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