BLASTX nr result

ID: Coptis25_contig00032603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032603
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280139.2| PREDICTED: transcription factor E2FC-like [V...   115   1e-50
emb|CBI19849.3| unnamed protein product [Vitis vinifera]              115   1e-50
ref|XP_002510521.1| E2F4,5, putative [Ricinus communis] gi|22355...   110   2e-47
ref|XP_004152759.1| PREDICTED: transcription factor E2FC-like [C...   108   6e-46
ref|XP_003527661.1| PREDICTED: transcription factor E2FC-like [G...   107   1e-45

>ref|XP_002280139.2| PREDICTED: transcription factor E2FC-like [Vitis vinifera]
          Length = 437

 Score =  115 bits (287), Expect(2) = 1e-50
 Identities = 58/86 (67%), Positives = 72/86 (83%)
 Frame = +2

Query: 245 SQVARLKAELQRLCDEENRLDEKIRLKQERLRALDVDANSQKFLFLTEEDITSVPCFQNK 424
           ++V RLKAE++RL  EE RLD+ IR KQE LRA+  D N QK LFLTEEDIT++PCFQN+
Sbjct: 224 NEVTRLKAEVERLYAEECRLDDCIREKQELLRAIAGDENCQKHLFLTEEDITTLPCFQNQ 283

Query: 425 TLIAIKAPKASSIEVPDPDQDMDCSE 502
           TLIAIKAP+ASS+EVPDPD+D+  S+
Sbjct: 284 TLIAIKAPQASSVEVPDPDEDIGFSQ 309



 Score =  109 bits (273), Expect(2) = 1e-50
 Identities = 56/76 (73%), Positives = 65/76 (85%)
 Frame = +3

Query: 18  RIDSSLGLLTKKFITLMLEADDGILDLNKTAEVLKVQKRRIYDITNVLEGIELIEKTSKN 197
           R DSSLGLLTKKFI+L+ EA DG LDLN+TA+VL+VQKRRIYDITNVLEGI LIEKTSKN
Sbjct: 148 RYDSSLGLLTKKFISLIQEAKDGTLDLNRTADVLEVQKRRIYDITNVLEGIGLIEKTSKN 207

Query: 198 HIRLKGLGLSRPLEVE 245
           HI  KG  +S P +++
Sbjct: 208 HISWKGFDMSGPQKMD 223


>emb|CBI19849.3| unnamed protein product [Vitis vinifera]
          Length = 436

 Score =  115 bits (287), Expect(2) = 1e-50
 Identities = 58/86 (67%), Positives = 72/86 (83%)
 Frame = +2

Query: 245 SQVARLKAELQRLCDEENRLDEKIRLKQERLRALDVDANSQKFLFLTEEDITSVPCFQNK 424
           ++V RLKAE++RL  EE RLD+ IR KQE LRA+  D N QK LFLTEEDIT++PCFQN+
Sbjct: 224 NEVTRLKAEVERLYAEECRLDDCIREKQELLRAIAGDENCQKHLFLTEEDITTLPCFQNQ 283

Query: 425 TLIAIKAPKASSIEVPDPDQDMDCSE 502
           TLIAIKAP+ASS+EVPDPD+D+  S+
Sbjct: 284 TLIAIKAPQASSVEVPDPDEDIGFSQ 309



 Score =  109 bits (273), Expect(2) = 1e-50
 Identities = 56/76 (73%), Positives = 65/76 (85%)
 Frame = +3

Query: 18  RIDSSLGLLTKKFITLMLEADDGILDLNKTAEVLKVQKRRIYDITNVLEGIELIEKTSKN 197
           R DSSLGLLTKKFI+L+ EA DG LDLN+TA+VL+VQKRRIYDITNVLEGI LIEKTSKN
Sbjct: 148 RYDSSLGLLTKKFISLIQEAKDGTLDLNRTADVLEVQKRRIYDITNVLEGIGLIEKTSKN 207

Query: 198 HIRLKGLGLSRPLEVE 245
           HI  KG  +S P +++
Sbjct: 208 HISWKGFDMSGPQKMD 223


>ref|XP_002510521.1| E2F4,5, putative [Ricinus communis] gi|223551222|gb|EEF52708.1|
           E2F4,5, putative [Ricinus communis]
          Length = 386

 Score =  110 bits (274), Expect(2) = 2e-47
 Identities = 56/68 (82%), Positives = 61/68 (89%)
 Frame = +3

Query: 12  GGRIDSSLGLLTKKFITLMLEADDGILDLNKTAEVLKVQKRRIYDITNVLEGIELIEKTS 191
           G R DSSLGLLTKKF+ L+ EA DG LDLN+TA+VL+VQKRRIYDITNVLEGIELIEKTS
Sbjct: 137 GCRYDSSLGLLTKKFVKLIQEAKDGTLDLNRTADVLEVQKRRIYDITNVLEGIELIEKTS 196

Query: 192 KNHIRLKG 215
           KNHIR KG
Sbjct: 197 KNHIRWKG 204



 Score =  104 bits (259), Expect(2) = 2e-47
 Identities = 49/80 (61%), Positives = 66/80 (82%)
 Frame = +2

Query: 251 VARLKAELQRLCDEENRLDEKIRLKQERLRALDVDANSQKFLFLTEEDITSVPCFQNKTL 430
           V  LK E++ L  E++RLDE IR KQE LRAL+ D N +++LF+TEEDITS+ C+QN+TL
Sbjct: 217 VTELKTEVESLHAEDHRLDESIREKQELLRALEEDENKKRYLFMTEEDITSLACYQNRTL 276

Query: 431 IAIKAPKASSIEVPDPDQDM 490
           +AIKAP+AS +EVPDPD+D+
Sbjct: 277 LAIKAPQASYLEVPDPDEDI 296


>ref|XP_004152759.1| PREDICTED: transcription factor E2FC-like [Cucumis sativus]
           gi|449521766|ref|XP_004167900.1| PREDICTED:
           transcription factor E2FC-like [Cucumis sativus]
          Length = 410

 Score =  108 bits (271), Expect(2) = 6e-46
 Identities = 56/71 (78%), Positives = 60/71 (84%)
 Frame = +3

Query: 3   QPPGGRIDSSLGLLTKKFITLMLEADDGILDLNKTAEVLKVQKRRIYDITNVLEGIELIE 182
           Q   GR DSSLG LTKKFI L+ EA+DG LDLNKTA+VLKVQKRRIYDITNVLEGI LIE
Sbjct: 149 QSTNGRYDSSLGFLTKKFIRLVQEAEDGTLDLNKTADVLKVQKRRIYDITNVLEGIGLIE 208

Query: 183 KTSKNHIRLKG 215
           KT+ NHIR KG
Sbjct: 209 KTTTNHIRWKG 219



 Score =  100 bits (249), Expect(2) = 6e-46
 Identities = 50/85 (58%), Positives = 66/85 (77%)
 Frame = +2

Query: 248 QVARLKAELQRLCDEENRLDEKIRLKQERLRALDVDANSQKFLFLTEEDITSVPCFQNKT 427
           QV RLK E++ L  +E RLDE IR+KQE LR L+ +A+ +  LF+TEEDI  +PCF+N+T
Sbjct: 231 QVGRLKDEVKSLYADERRLDELIRMKQELLRNLEQNAHYRNHLFITEEDILRIPCFKNQT 290

Query: 428 LIAIKAPKASSIEVPDPDQDMDCSE 502
           LIA+KAP+AS IEVPDPD++   SE
Sbjct: 291 LIAVKAPQASCIEVPDPDEEACFSE 315


>ref|XP_003527661.1| PREDICTED: transcription factor E2FC-like [Glycine max]
          Length = 473

 Score =  107 bits (266), Expect(2) = 1e-45
 Identities = 54/76 (71%), Positives = 64/76 (84%)
 Frame = +3

Query: 18  RIDSSLGLLTKKFITLMLEADDGILDLNKTAEVLKVQKRRIYDITNVLEGIELIEKTSKN 197
           R DSSLGLLTKKF++L+ +A DG LDLN+TAE+L+VQKRRIYDITNVLEG+ LIEKTSKN
Sbjct: 190 RYDSSLGLLTKKFVSLIQDAKDGTLDLNRTAEILEVQKRRIYDITNVLEGVGLIEKTSKN 249

Query: 198 HIRLKGLGLSRPLEVE 245
           HI+ KG     P E+E
Sbjct: 250 HIQWKGCDGLGPQELE 265



 Score =  101 bits (251), Expect(2) = 1e-45
 Identities = 51/81 (62%), Positives = 64/81 (79%)
 Frame = +2

Query: 248 QVARLKAELQRLCDEENRLDEKIRLKQERLRALDVDANSQKFLFLTEEDITSVPCFQNKT 427
           QV  LKAE+  L  EE+ LD+ IR KQE LR L+   +SQK+LFLT+EDI S+PCFQN+ 
Sbjct: 267 QVNSLKAEVDSLYAEESELDDCIRKKQELLRNLEESESSQKYLFLTKEDILSLPCFQNQE 326

Query: 428 LIAIKAPKASSIEVPDPDQDM 490
           +IAIKAPKAS IEVPDPD+++
Sbjct: 327 IIAIKAPKASCIEVPDPDEEL 347


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