BLASTX nr result
ID: Coptis25_contig00032603
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00032603 (502 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280139.2| PREDICTED: transcription factor E2FC-like [V... 115 1e-50 emb|CBI19849.3| unnamed protein product [Vitis vinifera] 115 1e-50 ref|XP_002510521.1| E2F4,5, putative [Ricinus communis] gi|22355... 110 2e-47 ref|XP_004152759.1| PREDICTED: transcription factor E2FC-like [C... 108 6e-46 ref|XP_003527661.1| PREDICTED: transcription factor E2FC-like [G... 107 1e-45 >ref|XP_002280139.2| PREDICTED: transcription factor E2FC-like [Vitis vinifera] Length = 437 Score = 115 bits (287), Expect(2) = 1e-50 Identities = 58/86 (67%), Positives = 72/86 (83%) Frame = +2 Query: 245 SQVARLKAELQRLCDEENRLDEKIRLKQERLRALDVDANSQKFLFLTEEDITSVPCFQNK 424 ++V RLKAE++RL EE RLD+ IR KQE LRA+ D N QK LFLTEEDIT++PCFQN+ Sbjct: 224 NEVTRLKAEVERLYAEECRLDDCIREKQELLRAIAGDENCQKHLFLTEEDITTLPCFQNQ 283 Query: 425 TLIAIKAPKASSIEVPDPDQDMDCSE 502 TLIAIKAP+ASS+EVPDPD+D+ S+ Sbjct: 284 TLIAIKAPQASSVEVPDPDEDIGFSQ 309 Score = 109 bits (273), Expect(2) = 1e-50 Identities = 56/76 (73%), Positives = 65/76 (85%) Frame = +3 Query: 18 RIDSSLGLLTKKFITLMLEADDGILDLNKTAEVLKVQKRRIYDITNVLEGIELIEKTSKN 197 R DSSLGLLTKKFI+L+ EA DG LDLN+TA+VL+VQKRRIYDITNVLEGI LIEKTSKN Sbjct: 148 RYDSSLGLLTKKFISLIQEAKDGTLDLNRTADVLEVQKRRIYDITNVLEGIGLIEKTSKN 207 Query: 198 HIRLKGLGLSRPLEVE 245 HI KG +S P +++ Sbjct: 208 HISWKGFDMSGPQKMD 223 >emb|CBI19849.3| unnamed protein product [Vitis vinifera] Length = 436 Score = 115 bits (287), Expect(2) = 1e-50 Identities = 58/86 (67%), Positives = 72/86 (83%) Frame = +2 Query: 245 SQVARLKAELQRLCDEENRLDEKIRLKQERLRALDVDANSQKFLFLTEEDITSVPCFQNK 424 ++V RLKAE++RL EE RLD+ IR KQE LRA+ D N QK LFLTEEDIT++PCFQN+ Sbjct: 224 NEVTRLKAEVERLYAEECRLDDCIREKQELLRAIAGDENCQKHLFLTEEDITTLPCFQNQ 283 Query: 425 TLIAIKAPKASSIEVPDPDQDMDCSE 502 TLIAIKAP+ASS+EVPDPD+D+ S+ Sbjct: 284 TLIAIKAPQASSVEVPDPDEDIGFSQ 309 Score = 109 bits (273), Expect(2) = 1e-50 Identities = 56/76 (73%), Positives = 65/76 (85%) Frame = +3 Query: 18 RIDSSLGLLTKKFITLMLEADDGILDLNKTAEVLKVQKRRIYDITNVLEGIELIEKTSKN 197 R DSSLGLLTKKFI+L+ EA DG LDLN+TA+VL+VQKRRIYDITNVLEGI LIEKTSKN Sbjct: 148 RYDSSLGLLTKKFISLIQEAKDGTLDLNRTADVLEVQKRRIYDITNVLEGIGLIEKTSKN 207 Query: 198 HIRLKGLGLSRPLEVE 245 HI KG +S P +++ Sbjct: 208 HISWKGFDMSGPQKMD 223 >ref|XP_002510521.1| E2F4,5, putative [Ricinus communis] gi|223551222|gb|EEF52708.1| E2F4,5, putative [Ricinus communis] Length = 386 Score = 110 bits (274), Expect(2) = 2e-47 Identities = 56/68 (82%), Positives = 61/68 (89%) Frame = +3 Query: 12 GGRIDSSLGLLTKKFITLMLEADDGILDLNKTAEVLKVQKRRIYDITNVLEGIELIEKTS 191 G R DSSLGLLTKKF+ L+ EA DG LDLN+TA+VL+VQKRRIYDITNVLEGIELIEKTS Sbjct: 137 GCRYDSSLGLLTKKFVKLIQEAKDGTLDLNRTADVLEVQKRRIYDITNVLEGIELIEKTS 196 Query: 192 KNHIRLKG 215 KNHIR KG Sbjct: 197 KNHIRWKG 204 Score = 104 bits (259), Expect(2) = 2e-47 Identities = 49/80 (61%), Positives = 66/80 (82%) Frame = +2 Query: 251 VARLKAELQRLCDEENRLDEKIRLKQERLRALDVDANSQKFLFLTEEDITSVPCFQNKTL 430 V LK E++ L E++RLDE IR KQE LRAL+ D N +++LF+TEEDITS+ C+QN+TL Sbjct: 217 VTELKTEVESLHAEDHRLDESIREKQELLRALEEDENKKRYLFMTEEDITSLACYQNRTL 276 Query: 431 IAIKAPKASSIEVPDPDQDM 490 +AIKAP+AS +EVPDPD+D+ Sbjct: 277 LAIKAPQASYLEVPDPDEDI 296 >ref|XP_004152759.1| PREDICTED: transcription factor E2FC-like [Cucumis sativus] gi|449521766|ref|XP_004167900.1| PREDICTED: transcription factor E2FC-like [Cucumis sativus] Length = 410 Score = 108 bits (271), Expect(2) = 6e-46 Identities = 56/71 (78%), Positives = 60/71 (84%) Frame = +3 Query: 3 QPPGGRIDSSLGLLTKKFITLMLEADDGILDLNKTAEVLKVQKRRIYDITNVLEGIELIE 182 Q GR DSSLG LTKKFI L+ EA+DG LDLNKTA+VLKVQKRRIYDITNVLEGI LIE Sbjct: 149 QSTNGRYDSSLGFLTKKFIRLVQEAEDGTLDLNKTADVLKVQKRRIYDITNVLEGIGLIE 208 Query: 183 KTSKNHIRLKG 215 KT+ NHIR KG Sbjct: 209 KTTTNHIRWKG 219 Score = 100 bits (249), Expect(2) = 6e-46 Identities = 50/85 (58%), Positives = 66/85 (77%) Frame = +2 Query: 248 QVARLKAELQRLCDEENRLDEKIRLKQERLRALDVDANSQKFLFLTEEDITSVPCFQNKT 427 QV RLK E++ L +E RLDE IR+KQE LR L+ +A+ + LF+TEEDI +PCF+N+T Sbjct: 231 QVGRLKDEVKSLYADERRLDELIRMKQELLRNLEQNAHYRNHLFITEEDILRIPCFKNQT 290 Query: 428 LIAIKAPKASSIEVPDPDQDMDCSE 502 LIA+KAP+AS IEVPDPD++ SE Sbjct: 291 LIAVKAPQASCIEVPDPDEEACFSE 315 >ref|XP_003527661.1| PREDICTED: transcription factor E2FC-like [Glycine max] Length = 473 Score = 107 bits (266), Expect(2) = 1e-45 Identities = 54/76 (71%), Positives = 64/76 (84%) Frame = +3 Query: 18 RIDSSLGLLTKKFITLMLEADDGILDLNKTAEVLKVQKRRIYDITNVLEGIELIEKTSKN 197 R DSSLGLLTKKF++L+ +A DG LDLN+TAE+L+VQKRRIYDITNVLEG+ LIEKTSKN Sbjct: 190 RYDSSLGLLTKKFVSLIQDAKDGTLDLNRTAEILEVQKRRIYDITNVLEGVGLIEKTSKN 249 Query: 198 HIRLKGLGLSRPLEVE 245 HI+ KG P E+E Sbjct: 250 HIQWKGCDGLGPQELE 265 Score = 101 bits (251), Expect(2) = 1e-45 Identities = 51/81 (62%), Positives = 64/81 (79%) Frame = +2 Query: 248 QVARLKAELQRLCDEENRLDEKIRLKQERLRALDVDANSQKFLFLTEEDITSVPCFQNKT 427 QV LKAE+ L EE+ LD+ IR KQE LR L+ +SQK+LFLT+EDI S+PCFQN+ Sbjct: 267 QVNSLKAEVDSLYAEESELDDCIRKKQELLRNLEESESSQKYLFLTKEDILSLPCFQNQE 326 Query: 428 LIAIKAPKASSIEVPDPDQDM 490 +IAIKAPKAS IEVPDPD+++ Sbjct: 327 IIAIKAPKASCIEVPDPDEEL 347