BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032599
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312177.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|XP_002520771.1| cohesin subunit rad21, putative [Ricinus com...   110   2e-22
ref|XP_003616515.1| Sister chromatid cohesion 1 protein [Medicag...   106   2e-21
ref|XP_003616681.1| Double-strand-break repair protein rad21-lik...   104   6e-21
ref|XP_002273379.2| PREDICTED: sister chromatid cohesion 1 prote...   103   1e-20

>ref|XP_002312177.1| predicted protein [Populus trichocarpa] gi|222851997|gb|EEE89544.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  112 bits (280), Expect = 3e-23
 Identities = 60/81 (74%), Positives = 67/81 (82%)
 Frame = +3

Query: 3   GILMGGVVIVYERKVKLLFDDVSRLLVEINEAWKIKPVNEDPTVLPKAKSQAKFEAVTLP 182
           GILMGGVVIVYERKVKLL+DDV+RLLVEINEAWK+K V  DPTVLPK KSQA+ EAVTLP
Sbjct: 39  GILMGGVVIVYERKVKLLYDDVTRLLVEINEAWKVK-VAPDPTVLPKGKSQARKEAVTLP 97

Query: 183 DKNREIVEEIERSLNASSKTT 245
           +     V EIE+SLN S+  T
Sbjct: 98  ENQETDVGEIEQSLNYSNAAT 118


>ref|XP_002520771.1| cohesin subunit rad21, putative [Ricinus communis]
           gi|223539902|gb|EEF41480.1| cohesin subunit rad21,
           putative [Ricinus communis]
          Length = 613

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/82 (68%), Positives = 64/82 (78%)
 Frame = +3

Query: 3   GILMGGVVIVYERKVKLLFDDVSRLLVEINEAWKIKPVNEDPTVLPKAKSQAKFEAVTLP 182
           GILMGGVVIVYERKVKLL+DDV+RLLVE+NEAWK+     DPTVLPK KSQAK EAVTLP
Sbjct: 39  GILMGGVVIVYERKVKLLYDDVTRLLVEVNEAWKVNSAPPDPTVLPKGKSQAKKEAVTLP 98

Query: 183 DKNREIVEEIERSLNASSKTTA 248
           +       EIE+S+N S+   A
Sbjct: 99  ENQDTDAGEIEQSVNFSNANAA 120


>ref|XP_003616515.1| Sister chromatid cohesion 1 protein [Medicago truncatula]
           gi|355517850|gb|AES99473.1| Sister chromatid cohesion 1
           protein [Medicago truncatula]
          Length = 231

 Score =  106 bits (264), Expect = 2e-21
 Identities = 56/81 (69%), Positives = 66/81 (81%)
 Frame = +3

Query: 3   GILMGGVVIVYERKVKLLFDDVSRLLVEINEAWKIKPVNEDPTVLPKAKSQAKFEAVTLP 182
           GILMGGVVIVYERKVKLL+DDVSRLLVEINEAWK+K V  D T+LPK KSQAK  A+TLP
Sbjct: 57  GILMGGVVIVYERKVKLLYDDVSRLLVEINEAWKVKSV-PDHTLLPKGKSQAKRAAITLP 115

Query: 183 DKNREIVEEIERSLNASSKTT 245
            K +  +EE+E S  +++ TT
Sbjct: 116 GKEQMTLEELELSRQSNATTT 136


>ref|XP_003616681.1| Double-strand-break repair protein rad21-like protein [Medicago
           truncatula] gi|355518016|gb|AES99639.1|
           Double-strand-break repair protein rad21-like protein
           [Medicago truncatula]
          Length = 605

 Score =  104 bits (260), Expect = 6e-21
 Identities = 56/82 (68%), Positives = 64/82 (78%)
 Frame = +3

Query: 3   GILMGGVVIVYERKVKLLFDDVSRLLVEINEAWKIKPVNEDPTVLPKAKSQAKFEAVTLP 182
           GILMGGVVIVYERKVKLL+DDVSRLLVEINEAWK+K    DPTVLPK KSQAK   +T+P
Sbjct: 62  GILMGGVVIVYERKVKLLYDDVSRLLVEINEAWKVKSA-PDPTVLPKGKSQAKRNEITIP 120

Query: 183 DKNREIVEEIERSLNASSKTTA 248
           +K R  +EE   +   S+ TTA
Sbjct: 121 NKERGSIEEDIGNSYQSTATTA 142


>ref|XP_002273379.2| PREDICTED: sister chromatid cohesion 1 protein 1-like [Vitis
           vinifera]
          Length = 608

 Score =  103 bits (257), Expect = 1e-20
 Identities = 54/82 (65%), Positives = 62/82 (75%), Gaps = 1/82 (1%)
 Frame = +3

Query: 3   GILMGGVVIVYERKVKLLFDDVSRLLVEINEAWKIKP-VNEDPTVLPKAKSQAKFEAVTL 179
           GILMGGVVI+YERKVKLL+DDV+RL+VE+NEAWK+K       T LPK KSQAK+EAVTL
Sbjct: 39  GILMGGVVIIYERKVKLLYDDVTRLMVELNEAWKVKAGAGSHSTDLPKRKSQAKYEAVTL 98

Query: 180 PDKNREIVEEIERSLNASSKTT 245
           PD       EIER LN S+  T
Sbjct: 99  PDNEEGDAPEIERFLNFSNTAT 120