BLASTX nr result

ID: Coptis25_contig00032598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032598
         (1281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276941.2| PREDICTED: uncharacterized protein LOC100267...   389   e-106
emb|CAN71659.1| hypothetical protein VITISV_016184 [Vitis vinifera]   384   e-104
ref|XP_002525437.1| conserved hypothetical protein [Ricinus comm...   372   e-101
ref|NP_001239887.1| uncharacterized protein LOC100775728 [Glycin...   358   2e-96
ref|XP_002325833.1| predicted protein [Populus trichocarpa] gi|2...   355   1e-95

>ref|XP_002276941.2| PREDICTED: uncharacterized protein LOC100267590 [Vitis vinifera]
          Length = 386

 Score =  389 bits (999), Expect = e-106
 Identities = 207/381 (54%), Positives = 258/381 (67%), Gaps = 13/381 (3%)
 Frame = +1

Query: 31   FSPSFTPLVPTCQTKHP----FNSYQLRVQRDFSVLAMASSSFPLNNVEHWEREFKDHGV 198
            FSP    L  T  TKH        +Q   +R+F + A+AS  +   NV++ E +F  HGV
Sbjct: 9    FSPCLGSLWSTKPTKHLPCHLSTPFQYSNKREFPLAAVASVPYIPANVDYLETQFSGHGV 68

Query: 199  SFAEIGDSCVVRMRLDNGSVASLMLPSGLITAYKAHMWHGSTLEVLHTIVSEGEDGAAVI 378
            +F  IGDS VV+M L+NGS+ASLMLPSGLIT+YKA MWHG TLEVLHT V+E ED  AVI
Sbjct: 69   TFEGIGDSYVVKMGLENGSLASLMLPSGLITSYKAPMWHGGTLEVLHTTVTE-EDSGAVI 127

Query: 379  QGGMFLDFRCTSQGGVPWSPGTWVLHDVRGTAEDFIEVELVSRNSEDMVEVKHIVTLHPD 558
            QGG+ L   C S GG+ WSP +W+L DVRG AE+ I+VE+VS +SE+M E K+IVTL  D
Sbjct: 128  QGGVSLALECESDGGISWSPSSWILQDVRGNAEELIQVEMVSSDSENMAEAKYIVTLQQD 187

Query: 559  VLSSEVVITNYRSSALQVTGSLLSHLSVSTPDATYAVGLEGSNYFSKPPFVSDYTIIPP- 735
            ++SSE+VI+N +S  LQ+TGS++SHL+VS  DATYA+GLEGSN+FS+ PF+S++ +IPP 
Sbjct: 188  IISSEIVISNLKSLPLQLTGSVISHLTVSNLDATYAIGLEGSNFFSRTPFLSNFGLIPPD 247

Query: 736  ------VSESRTTG--AFQGLFSSRGKNDQNGAAXXXXXXXXXXXXXXXXXDNYAQLTEE 891
                  V  S+  G    +   S     +QN A                  DNY QL+ E
Sbjct: 248  FGQKNEVGSSQLWGQPGIRRFLSGSNAKNQNNA--DQVERIKKEEMEGEEEDNYKQLSSE 305

Query: 892  MSRIYTSAPRQFTFIDRGKRNSVAVGSSGFEELYIFSPGSNYELYGKYAYICTGPSAVLK 1071
            MSRIYTSAPR FT IDRG+RNSV VG  GF+ELY+FSPGS +E Y KY YIC G SAVLK
Sbjct: 306  MSRIYTSAPRNFTVIDRGRRNSVVVGRDGFKELYMFSPGSTHECYSKYTYICVGQSAVLK 365

Query: 1072 PIVLNPKGVWRGEHFLHNPNL 1134
            PI+L P+ VWRG   LHNPNL
Sbjct: 366  PIILGPEDVWRGGQHLHNPNL 386


>emb|CAN71659.1| hypothetical protein VITISV_016184 [Vitis vinifera]
          Length = 754

 Score =  384 bits (985), Expect = e-104
 Identities = 198/352 (56%), Positives = 248/352 (70%), Gaps = 9/352 (2%)
 Frame = +1

Query: 106  QRDFSVLAMASSSFPLNNVEHWEREFKDHGVSFAEIGDSCVVRMRLDNGSVASLMLPSGL 285
            +R+F + A+AS  +   NV++ E +F  HGV+F  IGDS VV+M L+NGS+ASLMLPSGL
Sbjct: 406  KREFPLAAVASVPYIPANVDYLETQFSGHGVTFEGIGDSYVVKMGLENGSLASLMLPSGL 465

Query: 286  ITAYKAHMWHGSTLEVLHTIVSEGEDGAAVIQGGMFLDFRCTSQGGVPWSPGTWVLHDVR 465
            IT+YKA MWHG TLEVLHT V+E ED  AVIQGG+ L   C S GG+ WSP +W+L DVR
Sbjct: 466  ITSYKAPMWHGGTLEVLHTTVTE-EDSGAVIQGGVSLALECESDGGISWSPSSWILQDVR 524

Query: 466  GTAEDFIEVELVSRNSEDMVEVKHIVTLHPDVLSSEVVITNYRSSALQVTGSLLSHLSVS 645
            G AE+ I+VE+VS +SE+M E K+IVTL  D++SSE+VI+N +S  LQ+TGS++SHL+VS
Sbjct: 525  GNAEELIQVEMVSSDSENMAEAKYIVTLQQDIISSEIVISNLKSLPLQLTGSVISHLTVS 584

Query: 646  TPDATYAVGLEGSNYFSKPPFVSDYTIIPP-------VSESRTTG--AFQGLFSSRGKND 798
              DATYA+GLEGSN+FS+ PF+S++ +IPP       V  S+  G    +   S     +
Sbjct: 585  NLDATYAIGLEGSNFFSRTPFLSNFGLIPPDFGQKNEVGSSQLWGQPGIRRFLSGSNAKN 644

Query: 799  QNGAAXXXXXXXXXXXXXXXXXDNYAQLTEEMSRIYTSAPRQFTFIDRGKRNSVAVGSSG 978
            QN A                  DNY QL+ EMSRIYTSAPR FT IDRG+RNSV VG  G
Sbjct: 645  QNNA--DQVERIKKEEMEGEEEDNYKQLSSEMSRIYTSAPRNFTVIDRGRRNSVVVGRDG 702

Query: 979  FEELYIFSPGSNYELYGKYAYICTGPSAVLKPIVLNPKGVWRGEHFLHNPNL 1134
            F+ELY+FSPGS +E Y KY YIC G SAVLKPI+L P+ VWRG   LHNPNL
Sbjct: 703  FKELYMFSPGSTHECYSKYTYICVGQSAVLKPIILGPEDVWRGGQHLHNPNL 754



 Score =  143 bits (361), Expect = 8e-32
 Identities = 91/324 (28%), Positives = 158/324 (48%), Gaps = 4/324 (1%)
 Frame = +1

Query: 172  EREFKDHGVSFAEIGDSCVVRMRLDNGSVASLMLPSGLITAYKAHM-WHGSTLE-VLHTI 345
            +++F   G+ F E G+  +V + + NGS   L +P GL+T+YK  + W     E VL+T+
Sbjct: 85   DQKFGRKGIKFLESGNVPLVELTVRNGSSLRLRIPDGLVTSYKPKVNWKDDGFEEVLYTL 144

Query: 346  VSEGEDGAAVIQGGMFLDFRCTSQGGVPWSPGT--WVLHDVRGTAEDFIEVELVSRNSED 519
             +   D     +GG+ L     S      SP +  W + DV   A D ++VEL   +   
Sbjct: 145  PAAASDSTKP-KGGIGLVINDVSDPASKLSPLSTEWAVKDVDSDAIDALQVELSCTSGT- 202

Query: 520  MVEVKHIVTLHPDVLSSEVVITNYRSSALQVTGSLLSHLSVSTPDATYAVGLEGSNYFSK 699
             +++ ++V+L+P+ +++ V++ N     + +T ++LSH            GL+G +Y S 
Sbjct: 203  -LDITYVVSLYPESMATAVLVNNNGRKPVSLTSAMLSHFKFKRRGGAAIQGLKGCSYCSH 261

Query: 700  PPFVSDYTIIPPVSESRTTGAFQGLFSSRGKNDQNGAAXXXXXXXXXXXXXXXXXDNYAQ 879
            PP  S + I+ P    +T     G FS   ++++   +                      
Sbjct: 262  PPLSSPFEILSPAEAMKTESP--GWFSFDSESEKKRGSWTIQDDPYIILKNKLSRVYTTP 319

Query: 880  LTEEMSRIYTSAPRQFTFIDRGKRNSVAVGSSGFEELYIFSPGSNYELYGKYAYICTGPS 1059
             TE +   Y + P ++  ID+G+     V   G+E++Y+ SPGS  E YGK  +ICTGP+
Sbjct: 320  PTERLKEFYDTPPSKYETIDQGRELFFRVIRIGYEDIYLSSPGSFSEKYGKDYFICTGPA 379

Query: 1060 AVLKPIVLNPKGVWRGEHFLHNPN 1131
            ++L P+V+NP   WR    + + N
Sbjct: 380  SILVPVVVNPGEGWRAAQVIEHDN 403


>ref|XP_002525437.1| conserved hypothetical protein [Ricinus communis]
            gi|223535250|gb|EEF36927.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 387

 Score =  372 bits (956), Expect = e-101
 Identities = 192/382 (50%), Positives = 261/382 (68%), Gaps = 13/382 (3%)
 Frame = +1

Query: 28   LFSPSFTPLVPTC-QTKHP--FNSYQLRV-------QRDFSVLAMASSSFPLNNVEHWER 177
            LFS +F P+  +   TKHP  F+SY   +       +R+F + ++AS  +   NV++ E+
Sbjct: 6    LFSLTFPPISSSSLNTKHPLFFHSYLPSISLQNSNKKREFPLPSVASIPYQPINVDYLEQ 65

Query: 178  EFKDHGVSFAEIGDSCVVRMRLDNGSVASLMLPSGLITAYKAHMWHGSTLEVLHTIVSEG 357
            EF  HGV+F +IGDSC+ +MRL+NGS A+LMLPSGLIT+YKAHMWHG   E+L T V EG
Sbjct: 66   EFSGHGVTFEDIGDSCIAKMRLENGSTATLMLPSGLITSYKAHMWHGGRAELLQTSVLEG 125

Query: 358  EDGAAVIQGGMFLDFRCTSQGGVPWSPGTWVLHDVRGTAEDFIEVELVSRNSEDMVEVKH 537
            +DG  VIQGG+ L F   S   + WSP +W L  +RG  ED I+VEL+S ++ED VEV+H
Sbjct: 126  KDGNPVIQGGVSLAFNFGSDNEILWSPTSWALRAIRGNPEDSIQVELISTDAEDKVEVRH 185

Query: 538  IVTLHPDVLSSEVVITNYRSSALQVTGSLLSHLSVSTPDATYAVGLEGSNYFSKPPFVSD 717
            +++L  D LSS++V++N +SS++++ GSL+SHL+VSTP+ATYA GLEGSN+F++P F S+
Sbjct: 186  VLSLTEDTLSSQLVVSNSKSSSIRLMGSLISHLTVSTPEATYAYGLEGSNFFNRPMFSSN 245

Query: 718  YTIIPPVSESR--TTGAFQGLFSSRGKNDQ-NGAAXXXXXXXXXXXXXXXXXDNYAQLTE 888
            ++I+PP S+    +       FS+ G  DQ N                    +NY QLT+
Sbjct: 246  FSIVPPDSQQSWYSDLGLNAFFSAWGARDQKNSDKGKDREVKNEEELEGEEDENYKQLTD 305

Query: 889  EMSRIYTSAPRQFTFIDRGKRNSVAVGSSGFEELYIFSPGSNYELYGKYAYICTGPSAVL 1068
            +MSRIYTSAP  FT IDRG+RNSV VG  GF ELY+FSPGS++E Y  Y+YIC G SA+L
Sbjct: 306  KMSRIYTSAPTDFTLIDRGRRNSVIVGRYGFNELYMFSPGSSHESYSMYSYICVGQSAML 365

Query: 1069 KPIVLNPKGVWRGEHFLHNPNL 1134
            KP++L+P  VW G   LHNPNL
Sbjct: 366  KPVILSPGDVWTGGQHLHNPNL 387


>ref|NP_001239887.1| uncharacterized protein LOC100775728 [Glycine max]
            gi|255634755|gb|ACU17739.1| unknown [Glycine max]
          Length = 381

 Score =  358 bits (918), Expect = 2e-96
 Identities = 186/385 (48%), Positives = 255/385 (66%), Gaps = 7/385 (1%)
 Frame = +1

Query: 1    MAMANISHRLFSPSFTPLVPTCQTKHPFNSYQ-----LRVQRDFSVLAMASSSFPLNNVE 165
            M MA +S   FS  F P      T++  +S +     +  +RDF + A+AS  +   N +
Sbjct: 1    MTMA-LSSLFFSTRFIPTPFVTSTRNIPSSPRTCASCIPHKRDFPLPAVASVPYQPINFD 59

Query: 166  HWEREFKDHGVSFAEIGDSCVVRMRLDNGSVASLMLPSGLITAYKAHMWHGSTLEVLHTI 345
            + + EF  HGV+F  + DSC+ +M L NGS+ ++MLPSGLIT+YKA MWHG  LE+LHT 
Sbjct: 60   YLQEEFSGHGVTFEGVEDSCIAKMELKNGSIVTMMLPSGLITSYKAPMWHGGKLELLHTN 119

Query: 346  VSEGEDGAAVIQGGMFLDFRC-TSQGGVPWSPGTWVLHDVRGTAEDFIEVELVSRNSEDM 522
            VSEGE G A+IQGG+ L+F   T  G   WSP  WVLH ++G A + I+VEL +R S+D 
Sbjct: 120  VSEGEYGDAIIQGGVSLNFNFQTDDGEFSWSPTNWVLHKIQGNANESIQVELTNRTSDDK 179

Query: 523  VEVKHIVTLHPDVLSSEVVITNYRSSALQVTGSLLSHLSVSTPDATYAVGLEGSNYFSKP 702
            + +K+IVTL  D L+SEV I+N +S  +Q+TGS+LSHL+VS+P+ATYA+GLE SNY SKP
Sbjct: 180  IGLKYIVTLEKDALNSEVEISNKKSLPVQMTGSILSHLTVSSPEATYALGLERSNYCSKP 239

Query: 703  PFVSDYTIIPPVSESRTTGAF-QGLFSSRGKNDQNGAAXXXXXXXXXXXXXXXXXDNYAQ 879
             F S++ + PP  +    G   + LF   G  DQN  +                 DNY Q
Sbjct: 240  LFESEFMLSPPDGQEEGFGKIVEQLFPQWGTKDQNNGSEGSQSEEMDEEI-----DNYKQ 294

Query: 880  LTEEMSRIYTSAPRQFTFIDRGKRNSVAVGSSGFEELYIFSPGSNYELYGKYAYICTGPS 1059
            L+E++S +YT  PR FT IDRG+RNSV+VG +GF+E+Y+FSPGS  E+Y KY+YIC G +
Sbjct: 295  LSEKLSHVYTDVPRNFTVIDRGRRNSVSVGRTGFDEMYLFSPGSRVEIYSKYSYICVGQA 354

Query: 1060 AVLKPIVLNPKGVWRGEHFLHNPNL 1134
            A+LKPI+L+P+ VWRG  ++HNPNL
Sbjct: 355  AILKPIILSPEDVWRGGQYIHNPNL 379


>ref|XP_002325833.1| predicted protein [Populus trichocarpa] gi|222862708|gb|EEF00215.1|
            predicted protein [Populus trichocarpa]
          Length = 356

 Score =  355 bits (912), Expect = 1e-95
 Identities = 187/380 (49%), Positives = 253/380 (66%), Gaps = 11/380 (2%)
 Frame = +1

Query: 28   LFSPSFTPLVPTCQT-KHPFN------SYQLRV---QRDFSVLAMASSSFPLNNVEHWER 177
            LFS SFT    T  T +H FN      S  L+    +R+F + ++AS  +   NV++ E 
Sbjct: 6    LFSLSFTSTPCTSLTNRHLFNFHPHLHSSSLQYSSKKREFPLPSVASIPYQPINVDYLEE 65

Query: 178  EFKDHGVSFAEIGDSCVVRMRLDNGSVASLMLPSGLITAYKAHMWHGSTLEVLHTIVSEG 357
            EF  HGV+F  + DSCV +M ++NGS  +LMLPSGLIT+YKA MWHG T+E+L T V EG
Sbjct: 66   EFSGHGVTFERLSDSCVAKMTVENGSSVTLMLPSGLITSYKARMWHGGTVELLQTSVLEG 125

Query: 358  EDGAAVIQGGMFLDFRCTSQGGVPWSPGTWVLHDVRGTAEDFIEVELVSRNSEDMVEVKH 537
            EDG+A I+GG+   F   S G + WSP TW L D+RG + D I+VE+VS +++DMVEV++
Sbjct: 126  EDGSAAIRGGVSPAFNFDSDGEISWSPSTWALKDIRGDSHDTIQVEMVSTDAKDMVEVRY 185

Query: 538  IVTLHPDVLSSEVVITNYRSSALQVTGSLLSHLSVSTPDATYAVGLEGSNYFSKPPFVSD 717
            I++L  + LSSE+ ++N +SS++Q+ G ++SHL+VSTP+AT+A GLEGS+++++P F+S+
Sbjct: 186  ILSLREETLSSELTVSNLKSSSIQMRGGIISHLTVSTPEATFAYGLEGSDFYNRPVFLSN 245

Query: 718  YTIIPP-VSESRTTGAFQGLFSSRGKNDQNGAAXXXXXXXXXXXXXXXXXDNYAQLTEEM 894
            + I+PP +S+ R        F   G+ +                      DNY  LTEEM
Sbjct: 246  FGIVPPDLSQKRG-------FEMEGEEN----------------------DNYKNLTEEM 276

Query: 895  SRIYTSAPRQFTFIDRGKRNSVAVGSSGFEELYIFSPGSNYELYGKYAYICTGPSAVLKP 1074
            SRIYTSAPR FT IDRG+RNSV VG  GFEELYIFSPGS+ E YG Y++IC G SA+LKP
Sbjct: 277  SRIYTSAPRDFTIIDRGRRNSVVVGREGFEELYIFSPGSSRESYGMYSFICVGQSAMLKP 336

Query: 1075 IVLNPKGVWRGEHFLHNPNL 1134
            + LNP   W G   LHNPNL
Sbjct: 337  VTLNPGDAWTGSQHLHNPNL 356


Top