BLASTX nr result
ID: Coptis25_contig00032596
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00032596 (508 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277247.1| PREDICTED: RPM1-interacting protein 4 [Vitis... 126 2e-27 ref|XP_003550860.1| PREDICTED: RPM1-interacting protein 4-like [... 111 5e-23 ref|XP_002322218.1| predicted protein [Populus trichocarpa] gi|2... 107 1e-21 ref|XP_003525623.1| PREDICTED: uncharacterized protein LOC100526... 103 1e-20 gb|ACU15988.1| unknown [Glycine max] 102 3e-20 >ref|XP_002277247.1| PREDICTED: RPM1-interacting protein 4 [Vitis vinifera] gi|297733635|emb|CBI14882.3| unnamed protein product [Vitis vinifera] Length = 74 Score = 126 bits (317), Expect = 2e-27 Identities = 55/71 (77%), Positives = 61/71 (85%) Frame = +1 Query: 91 QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARDDKKTNTSTNVVTPRRTNDNYKQNEEVR 270 QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARD+KKTN + NV +PRR + YKQNE+ Sbjct: 4 QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTNAAGNVASPRRNGNGYKQNEDYH 63 Query: 271 HPTKRKWFCCG 303 + KRKWFCCG Sbjct: 64 YSPKRKWFCCG 74 >ref|XP_003550860.1| PREDICTED: RPM1-interacting protein 4-like [Glycine max] Length = 75 Score = 111 bits (278), Expect = 5e-23 Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 3/75 (4%) Frame = +1 Query: 88 KQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARDDKKTNTSTNVVTPRRTNDNYKQNEEV 267 +Q+ GRPLPKFGEWDVNNPASAEGFTVIFNKARD+KKTNT+T TPRR++ +K NE Sbjct: 2 QQENGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTNTATATPTPRRSDPVFK-NENY 60 Query: 268 RHPT---KRKWFCCG 303 +P KRKWFCCG Sbjct: 61 NNPQYSGKRKWFCCG 75 >ref|XP_002322218.1| predicted protein [Populus trichocarpa] gi|222869214|gb|EEF06345.1| predicted protein [Populus trichocarpa] Length = 76 Score = 107 bits (267), Expect = 1e-21 Identities = 50/72 (69%), Positives = 57/72 (79%), Gaps = 4/72 (5%) Frame = +1 Query: 97 RGRPLPKFGEWDVNNPASAEGFTVIFNKARDDKKT-NTSTNVVTPRRTNDNYK---QNEE 264 +GRPLPKFGEWDVNNPASAEGFTVIFNKARD+KKT N+ VV+PRRT Y +NE Sbjct: 4 QGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTKNSPEKVVSPRRTEPGYNKNDKNEN 63 Query: 265 VRHPTKRKWFCC 300 +HP KR+W CC Sbjct: 64 YKHPPKRRWLCC 75 >ref|XP_003525623.1| PREDICTED: uncharacterized protein LOC100526954 [Glycine max] Length = 72 Score = 103 bits (258), Expect = 1e-20 Identities = 52/74 (70%), Positives = 58/74 (78%), Gaps = 3/74 (4%) Frame = +1 Query: 91 QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARDDKKTNTSTNVVTPRRTNDNYKQNEEVR 270 Q+ GRPLPKFGEWDVNNPASAEGFTVIFNKARD+KKTNT+ TPRR++ +K NE Sbjct: 4 QENGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTNTA----TPRRSDPVFK-NENYN 58 Query: 271 HPT---KRKWFCCG 303 P KRKWFCCG Sbjct: 59 TPQYSGKRKWFCCG 72 >gb|ACU15988.1| unknown [Glycine max] Length = 72 Score = 102 bits (254), Expect = 3e-20 Identities = 51/74 (68%), Positives = 58/74 (78%), Gaps = 3/74 (4%) Frame = +1 Query: 91 QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARDDKKTNTSTNVVTPRRTNDNYKQNEEVR 270 Q+ GRPLPKFGEWDVNNPASAEGFTVIFNKARD++KTNT+ TPRR++ +K NE Sbjct: 4 QENGRPLPKFGEWDVNNPASAEGFTVIFNKARDEEKTNTA----TPRRSDPVFK-NENYN 58 Query: 271 HPT---KRKWFCCG 303 P KRKWFCCG Sbjct: 59 TPQYSGKRKWFCCG 72