BLASTX nr result

ID: Coptis25_contig00032594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032594
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282540.1| PREDICTED: SPX domain-containing membrane pr...   249   2e-64
emb|CAN63492.1| hypothetical protein VITISV_034681 [Vitis vinifera]   249   2e-64
ref|XP_002298073.1| predicted protein [Populus trichocarpa] gi|2...   246   1e-63
ref|XP_002304461.1| predicted protein [Populus trichocarpa] gi|2...   241   6e-62
ref|XP_003592181.1| Membrane protein, putative [Medicago truncat...   239   1e-61

>ref|XP_002282540.1| PREDICTED: SPX domain-containing membrane protein At4g22990 [Vitis
           vinifera] gi|297742609|emb|CBI34758.3| unnamed protein
           product [Vitis vinifera]
          Length = 698

 Score =  249 bits (636), Expect = 2e-64
 Identities = 126/171 (73%), Positives = 146/171 (85%), Gaps = 2/171 (1%)
 Frame = +3

Query: 3   KTRMQASAGFVSASALGMACGPALAGLLQTRFRIYKLTFNQDTLPGWVMALAWLIYLVWL 182
           K RMQASAGFVSASALGMACGPALAGLLQ  F+IYK+TFN+DTLPGWVMA+AWL+YL+WL
Sbjct: 368 KIRMQASAGFVSASALGMACGPALAGLLQINFKIYKITFNEDTLPGWVMAVAWLVYLIWL 427

Query: 183 WISFIEPAHDSEEKCVAEGTDGGSI-NDALEKGLAQPLLLSSDEKKNDEDDALDCDAS-E 356
           WISF EP  +++E  + + ++   + NDALEKGLAQPLLLSS++K+ DED   D D S E
Sbjct: 428 WISFKEPVRETQESNIQQESNAEPVENDALEKGLAQPLLLSSEDKQEDEDGDQDNDVSEE 487

Query: 357 ASEESLKPAASVGSAYRLLTPSVKVQLLIYFMLKYAMEILLAESSVITTYY 509
           A EES  PA S+GSAYRLLTPSVKVQLLIYFMLKYAMEILL+ESSV+TTYY
Sbjct: 488 APEESRGPATSIGSAYRLLTPSVKVQLLIYFMLKYAMEILLSESSVVTTYY 538


>emb|CAN63492.1| hypothetical protein VITISV_034681 [Vitis vinifera]
          Length = 709

 Score =  249 bits (636), Expect = 2e-64
 Identities = 126/171 (73%), Positives = 146/171 (85%), Gaps = 2/171 (1%)
 Frame = +3

Query: 3   KTRMQASAGFVSASALGMACGPALAGLLQTRFRIYKLTFNQDTLPGWVMALAWLIYLVWL 182
           K RMQASAGFVSASALGMACGPALAGLLQ  F+IYK+TFN+DTLPGWVMA+AWL+YL+WL
Sbjct: 368 KIRMQASAGFVSASALGMACGPALAGLLQINFKIYKITFNEDTLPGWVMAVAWLVYLIWL 427

Query: 183 WISFIEPAHDSEEKCVAEGTDGGSI-NDALEKGLAQPLLLSSDEKKNDEDDALDCDAS-E 356
           WISF EP  +++E  + + ++   + NDALEKGLAQPLLLSS++K+ DED   D D S E
Sbjct: 428 WISFKEPVRETQESNIQQESNAEPVENDALEKGLAQPLLLSSEDKQEDEDGDQDNDVSEE 487

Query: 357 ASEESLKPAASVGSAYRLLTPSVKVQLLIYFMLKYAMEILLAESSVITTYY 509
           A EES  PA S+GSAYRLLTPSVKVQLLIYFMLKYAMEILL+ESSV+TTYY
Sbjct: 488 APEESRGPATSIGSAYRLLTPSVKVQLLIYFMLKYAMEILLSESSVVTTYY 538


>ref|XP_002298073.1| predicted protein [Populus trichocarpa] gi|222845331|gb|EEE82878.1|
           predicted protein [Populus trichocarpa]
          Length = 494

 Score =  246 bits (629), Expect = 1e-63
 Identities = 127/171 (74%), Positives = 144/171 (84%), Gaps = 2/171 (1%)
 Frame = +3

Query: 3   KTRMQASAGFVSASALGMACGPALAGLLQTRFRIYKLTFNQDTLPGWVMALAWLIYLVWL 182
           K RMQASAGFVSASALGMACGPALAGLLQT F++YKLTFNQDTLPGWVM+LAWLIYLVWL
Sbjct: 164 KLRMQASAGFVSASALGMACGPALAGLLQTNFKLYKLTFNQDTLPGWVMSLAWLIYLVWL 223

Query: 183 WISFIEPAHDSEEKCVAEGTDGGSI-NDALEKGLAQPLLLSSDEKKNDEDDALDCDAS-E 356
           WISF EP+H +EE   A+ +    + ND LEKGL QPLLLSS+E++  ED   + D S E
Sbjct: 224 WISFKEPSHVTEESSAAQESTAEPVENDVLEKGLKQPLLLSSEERRVTEDGDGEFDGSDE 283

Query: 357 ASEESLKPAASVGSAYRLLTPSVKVQLLIYFMLKYAMEILLAESSVITTYY 509
           A EE+  PA S+GSAYRLLTPSVKVQLLIYFMLKYAME+LL+ESSV+TTYY
Sbjct: 284 APEEARGPATSIGSAYRLLTPSVKVQLLIYFMLKYAMEVLLSESSVVTTYY 334


>ref|XP_002304461.1| predicted protein [Populus trichocarpa] gi|222841893|gb|EEE79440.1|
           predicted protein [Populus trichocarpa]
          Length = 698

 Score =  241 bits (614), Expect = 6e-62
 Identities = 125/171 (73%), Positives = 143/171 (83%), Gaps = 2/171 (1%)
 Frame = +3

Query: 3   KTRMQASAGFVSASALGMACGPALAGLLQTRFRIYKLTFNQDTLPGWVMALAWLIYLVWL 182
           K RMQASAGFVSASALGMACGPALAGLLQT F+IYKLTFNQ+TLPGWVM+LAWL+YLVWL
Sbjct: 368 KMRMQASAGFVSASALGMACGPALAGLLQTNFKIYKLTFNQETLPGWVMSLAWLLYLVWL 427

Query: 183 WISFIEPAHDSEEKCVA-EGTDGGSINDALEKGLAQPLLLSSDEKKNDEDDALDCDASE- 356
           WISF EP  ++EE   A E T     NDALEKGL +PLLL+S++K+  ED   + D S+ 
Sbjct: 428 WISFREPCLETEESSAAQESTTEPVENDALEKGLKKPLLLNSEDKQETEDGDGEFDGSDG 487

Query: 357 ASEESLKPAASVGSAYRLLTPSVKVQLLIYFMLKYAMEILLAESSVITTYY 509
           A EES  PA S+GSAY+LLTPSVKVQLLIYFMLKYAME+LL+ESSV+TTYY
Sbjct: 488 APEESRGPATSIGSAYKLLTPSVKVQLLIYFMLKYAMEVLLSESSVVTTYY 538


>ref|XP_003592181.1| Membrane protein, putative [Medicago truncatula]
           gi|355481229|gb|AES62432.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 697

 Score =  239 bits (611), Expect = 1e-61
 Identities = 120/169 (71%), Positives = 141/169 (83%)
 Frame = +3

Query: 3   KTRMQASAGFVSASALGMACGPALAGLLQTRFRIYKLTFNQDTLPGWVMALAWLIYLVWL 182
           K RMQASAGFVSASALGMACGPALAGLLQT F+IYK+TFNQDTLPGWVM +AWL+YL+WL
Sbjct: 368 KIRMQASAGFVSASALGMACGPALAGLLQTNFKIYKITFNQDTLPGWVMTVAWLVYLIWL 427

Query: 183 WISFIEPAHDSEEKCVAEGTDGGSINDALEKGLAQPLLLSSDEKKNDEDDALDCDASEAS 362
           WISF+EP+ + EE      ++    N+ALEKGL QPLL+SS++K+++E D    D  EA 
Sbjct: 428 WISFVEPSREFEENHTTNKSNAD--NNALEKGLKQPLLISSEDKEDEEAD----DGGEAP 481

Query: 363 EESLKPAASVGSAYRLLTPSVKVQLLIYFMLKYAMEILLAESSVITTYY 509
           E S +PA S+GSAYRLLTPSVKVQLLIYFMLKY MEILL+ESSV+TTYY
Sbjct: 482 EGSRRPANSIGSAYRLLTPSVKVQLLIYFMLKYVMEILLSESSVVTTYY 530


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