BLASTX nr result

ID: Coptis25_contig00032590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032590
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518800.1| conserved hypothetical protein [Ricinus comm...    67   2e-09
ref|XP_003524133.1| PREDICTED: uncharacterized protein LOC100802...    65   7e-09
ref|XP_002269567.2| PREDICTED: uncharacterized protein LOC100251...    64   1e-08
emb|CAN66065.1| hypothetical protein VITISV_025023 [Vitis vinifera]    61   1e-07
ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002518800.1| conserved hypothetical protein [Ricinus communis]
            gi|223542181|gb|EEF43725.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2820

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 11/90 (12%)
 Frame = -1

Query: 237  VLKIWDVLPLVEIPNVVVKLEKMTYLFSDYYMKRCMEQKYEGILVVPMSWNICSDVVKYK 58
            VLK+WD+LPL +IP +  +L+ +   ++D +M RC E+  EG L VP +W+   D+V+YK
Sbjct: 977  VLKVWDILPLEDIPRLAKRLDGIFGSYTDDFMNRCKEKCLEGNLEVPKTWSTSIDIVRYK 1036

Query: 57   CAA--------SLPD---LENSKVNESLLL 1
                       S  D   +ENSKV +SLLL
Sbjct: 1037 SLGNNEVGSNLSSDDGCYVENSKVTDSLLL 1066


>ref|XP_003524133.1| PREDICTED: uncharacterized protein LOC100802419 [Glycine max]
          Length = 2812

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 12/91 (13%)
 Frame = -1

Query: 237  VLKIWDVLPLVEIPNVVVKLEKMTYLFSDYYMKRCMEQKYEGILVVPMSWNICSDVVKYK 58
            VLKIWD++PL ++P +V +L+ +   ++D ++  C E+  EG +VVP+SW   +++ K+K
Sbjct: 966  VLKIWDIMPLEDVPKLVKRLDNIFGSYTDEFISCCSEKCLEGNMVVPISWERSTEITKFK 1025

Query: 57   CAASLPD------------LENSKVNESLLL 1
               +  +            +ENSKV ESLLL
Sbjct: 1026 TLDNNGNEAELSGCDQRIYVENSKVEESLLL 1056


>ref|XP_002269567.2| PREDICTED: uncharacterized protein LOC100251075 [Vitis vinifera]
          Length = 2818

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 14/93 (15%)
 Frame = -1

Query: 237  VLKIWDVLPLVEIPNVVVKLEKMTYLFSDYYMKRCMEQKYEGILVVPMSWNICSDVVKYK 58
            VLK+WD+L L +IP +V  L+ +  + +D Y+ RC ++ +EG L +PMSW    D+V+YK
Sbjct: 1056 VLKVWDILALEDIPKLVKHLDSLFEMNTDDYLSRCKKKSWEGELEIPMSWTTSYDIVQYK 1115

Query: 57   C--------------AASLPDLENSKVNESLLL 1
                            A     ENS V+ES L+
Sbjct: 1116 SLSNNATGKISNVSGLARRGGFENSIVSESFLI 1148


>emb|CAN66065.1| hypothetical protein VITISV_025023 [Vitis vinifera]
          Length = 2275

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
 Frame = -1

Query: 237  VLKIWDVLPLVEIPNVVVKLEKMTYLFSDYYMKRCMEQKYEG--ILVVPMSWNICSDVVK 64
            VLK+WD+L L +IP +V  L+ +  +++D Y+ RC ++ +EG   L +PMSW    D+V+
Sbjct: 812  VLKVWDILALEDIPKLVKHLDSLFEMYTDDYLTRCKKKSWEGHRELEIPMSWTTSYDIVQ 871

Query: 63   YKC--------------AASLPDLENSKVNESLLL 1
            YK                A     ENS V+ES L+
Sbjct: 872  YKSLSNNATGRISNVSGLARRGGFENSIVSESFLI 906


>ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|222851386|gb|EEE88933.1|
            predicted protein [Populus trichocarpa]
          Length = 1950

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
 Frame = -1

Query: 237  VLKIWDVLPLVEIPNVVVKLEKMTYLFSDYYMKRCMEQKYEGILVVPMSWNICSDVVKYK 58
            VLK+WD+L L +IP +  +LE +   ++D ++  C E+  EG L VP +W    D+ +YK
Sbjct: 805  VLKVWDLLALEDIPILAKRLEGIFETYTDDFISHCNEKCLEGDLEVPKTWRTSFDIPRYK 864

Query: 57   CAA---------SLPD----LENSKVNESLLL 1
              +         S PD    +ENSKV++SLLL
Sbjct: 865  SCSNNEIRSNSNSGPDGPYYVENSKVSDSLLL 896


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