BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032583
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE75905.1| OSJNBa0088I22.18 [Oryza sativa Japonica Group]        104   6e-34
gb|ABA95230.1| retrotransposon protein, putative, unclassified [...    99   2e-32
emb|CAN62328.1| hypothetical protein VITISV_029806 [Vitis vinifera]   110   3e-32
emb|CAN71185.1| hypothetical protein VITISV_014270 [Vitis vinifera]   112   5e-32
emb|CAN67119.1| hypothetical protein VITISV_017483 [Vitis vinifera]   111   7e-32

>emb|CAE75905.1| OSJNBa0088I22.18 [Oryza sativa Japonica Group]
          Length = 624

 Score =  104 bits (259), Expect(2) = 6e-34
 Identities = 57/126 (45%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
 Frame = +3

Query: 147 FHLPPQIFGCVCFVHNLKPSRDKLDSRPIKCVFLGYSCTQKGYKCYSPHLRKSFVCADVT 326
           F +PP++FGC CFV + +PS  KLD R +KC+F+GYS  QKGYKC+SP  R++FV  DVT
Sbjct: 211 FIVPPKVFGCTCFVRDHRPSVGKLDPRAVKCIFIGYSSGQKGYKCWSPSERRTFVSMDVT 270

Query: 327 FFEDVPFYSSEGKMSSEPFEDCIMPSGGAGYDLGENEGASEEGALLAPTDNLP---KRDL 497
           F E VPFY     +SS  F D   P        GEN  + EE        NLP   ++ +
Sbjct: 271 FRESVPFYGERTDLSS-LFVDLDNPIIDEDGQEGENGSSGEEFETGGEETNLPIAIRKGV 329

Query: 498 RSLDGR 515
           RS  G+
Sbjct: 330 RSNAGK 335



 Score = 65.9 bits (159), Expect(2) = 6e-34
 Identities = 32/55 (58%), Positives = 40/55 (72%)
 Frame = +1

Query: 4   RCLMFQTNLSKFYWAEAVLTATYLINRMPSSILGGKTPHSVLFLVNLFSIFPLKF 168
           R LM+  N+ KF W+EAV+TATYLINRMPS ILG KTP+ ++F  N F + P  F
Sbjct: 164 RSLMYTMNVPKFLWSEAVITATYLINRMPSRILGMKTPYEMVFGKNEFIVPPKVF 218


>gb|ABA95230.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 936

 Score = 99.4 bits (246), Expect(2) = 2e-32
 Identities = 50/102 (49%), Positives = 63/102 (61%)
 Frame = +3

Query: 147 FHLPPQIFGCVCFVHNLKPSRDKLDSRPIKCVFLGYSCTQKGYKCYSPHLRKSFVCADVT 326
           F +PP++FGC CFV + +PS  KLD R +KC+F+GYS  QKGYKC+SP  R++FV  DVT
Sbjct: 163 FIVPPKVFGCTCFVRDHRPSVGKLDPRAVKCIFIGYSSGQKGYKCWSPSERRTFVSMDVT 222

Query: 327 FFEDVPFYSSEGKMSSEPFEDCIMPSGGAGYDLGENEGASEE 452
           F E VPFY     +SS  F D   P        GEN  +  E
Sbjct: 223 FRESVPFYGERTDLSS-LFVDLDNPIIDEDGQEGENGSSGTE 263



 Score = 65.9 bits (159), Expect(2) = 2e-32
 Identities = 32/55 (58%), Positives = 40/55 (72%)
 Frame = +1

Query: 4   RCLMFQTNLSKFYWAEAVLTATYLINRMPSSILGGKTPHSVLFLVNLFSIFPLKF 168
           R LM+  N+ KF W+EAV+TATYLINRMPS ILG KTP+ ++F  N F + P  F
Sbjct: 116 RSLMYTMNVPKFLWSEAVMTATYLINRMPSRILGMKTPYEMVFGKNEFIVPPKVF 170


>emb|CAN62328.1| hypothetical protein VITISV_029806 [Vitis vinifera]
          Length = 996

 Score =  110 bits (275), Expect(2) = 3e-32
 Identities = 62/160 (38%), Positives = 87/160 (54%), Gaps = 3/160 (1%)
 Frame = +3

Query: 129 FPCQSFFHLPPQIFGCVCFVHNLKPSRDKLDSRPIKCVFLGYSCTQKGYKCYSPHLRKSF 308
           FP Q  + LPP++FGC CFVH L P +DKL ++ +KC+FLGYS  QKGY+CYS    + F
Sbjct: 348 FPDQPLYFLPPRVFGCTCFVHILTPGQDKLSAKAMKCLFLGYSRLQKGYRCYSLETHRYF 407

Query: 309 VCADVTFFEDVPFYSSEGKMSSEPFEDCIMPSGGAGYDLGENEGASEEGALLAPTDNLPK 488
           + ADVTFFED PF+S+  +  S P  + ++P                   +++P D +P 
Sbjct: 408 ISADVTFFEDSPFFSTTSE--SLPVSE-VLPI-----------------PIVSPPDAMPP 447

Query: 489 RDLRSLDGRVLGDRARP---VPTNSLPGARARPVPSVAIP 599
           R L+    R       P    P +SLP   A P P++  P
Sbjct: 448 RPLQVYHRRPPVVAPLPFAKAPADSLPIPSASPAPALPFP 487



 Score = 53.9 bits (128), Expect(2) = 3e-32
 Identities = 23/43 (53%), Positives = 32/43 (74%)
 Frame = +1

Query: 4   RCLMFQTNLSKFYWAEAVLTATYLINRMPSSILGGKTPHSVLF 132
           R ++  +N+   +W +AVLTA YLINRMPSS+L  + PHS+LF
Sbjct: 306 RTILLHSNVPFLFWGDAVLTACYLINRMPSSVLHDQIPHSLLF 348


>emb|CAN71185.1| hypothetical protein VITISV_014270 [Vitis vinifera]
          Length = 1024

 Score =  112 bits (279), Expect(2) = 5e-32
 Identities = 60/158 (37%), Positives = 88/158 (55%)
 Frame = +3

Query: 129 FPCQSFFHLPPQIFGCVCFVHNLKPSRDKLDSRPIKCVFLGYSCTQKGYKCYSPHLRKSF 308
           FP Q  + LPP++FGC CFVH L P +DKL ++ +KC+FLGYS  QKGY+CYS    + F
Sbjct: 386 FPDQPLYFLPPRVFGCTCFVHILTPGQDKLSAKAMKCLFLGYSRLQKGYRCYSLETHRYF 445

Query: 309 VCADVTFFEDVPFYSSEGKMSSEPFEDCIMPSGGAGYDLGENEGASEEGALLAPTDNLPK 488
           + ADVTFFED PF+S+  +  S P  + ++P                   +++P+D +P 
Sbjct: 446 ISADVTFFEDSPFFSTTSE--SLPVSE-VLPI-----------------PIVSPSDAMPP 485

Query: 489 RDLRSLDGRVLGDRARPVPTNSLPGARARPVPSVAIPE 602
           R L++             P +SLP   A P P++  P+
Sbjct: 486 RPLQA-------------PADSLPTPXASPAPALPSPD 510



 Score = 51.6 bits (122), Expect(2) = 5e-32
 Identities = 23/43 (53%), Positives = 31/43 (72%)
 Frame = +1

Query: 4   RCLMFQTNLSKFYWAEAVLTATYLINRMPSSILGGKTPHSVLF 132
           R ++   N+   +W +AVLTA YLINRMPSS+L  + PHS+LF
Sbjct: 344 RTILLHGNVPFRFWGDAVLTACYLINRMPSSVLHDQIPHSLLF 386


>emb|CAN67119.1| hypothetical protein VITISV_017483 [Vitis vinifera]
          Length = 1970

 Score =  111 bits (278), Expect(2) = 7e-32
 Identities = 63/160 (39%), Positives = 89/160 (55%), Gaps = 3/160 (1%)
 Frame = +3

Query: 129  FPCQSFFHLPPQIFGCVCFVHNLKPSRDKLDSRPIKCVFLGYSCTQKGYKCYSPHLRKSF 308
            FP Q  + LPP++FGC CF+H L P +DKL ++ IKC+FLGYS  QKGY+CYS    + F
Sbjct: 620  FPDQPLYFLPPRVFGCTCFIHILTPGQDKLSAKAIKCLFLGYSRLQKGYRCYSLETHRYF 679

Query: 309  VCADVTFFEDVPFYSSEGKMSSEPFEDCIMPSGGAGYDLGENEGASEEGALLAPTDNLPK 488
            + ADVTFFED PF+S+  +  S P  + ++P                   +++P D +P 
Sbjct: 680  ISADVTFFEDSPFFSTTSE--SLPVSE-VLPI-----------------PIVSPPDAMPP 719

Query: 489  RDLRSLD--GRVLGDRARP-VPTNSLPGARARPVPSVAIP 599
            R L+      RV+     P  P +SLP   A P P++  P
Sbjct: 720  RPLQVYHRRPRVVAPLTFPEAPADSLPIPSASPAPALPSP 759



 Score = 51.6 bits (122), Expect(2) = 7e-32
 Identities = 23/43 (53%), Positives = 32/43 (74%)
 Frame = +1

Query: 4   RCLMFQTNLSKFYWAEAVLTATYLINRMPSSILGGKTPHSVLF 132
           R L+  +++   +W +AVLTA YLINRMPSS+L  + PHS+LF
Sbjct: 578 RTLLLHSHVPFRFWGDAVLTACYLINRMPSSVLHDQIPHSLLF 620