BLASTX nr result
ID: Coptis25_contig00032583
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00032583 (644 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAE75905.1| OSJNBa0088I22.18 [Oryza sativa Japonica Group] 104 6e-34 gb|ABA95230.1| retrotransposon protein, putative, unclassified [... 99 2e-32 emb|CAN62328.1| hypothetical protein VITISV_029806 [Vitis vinifera] 110 3e-32 emb|CAN71185.1| hypothetical protein VITISV_014270 [Vitis vinifera] 112 5e-32 emb|CAN67119.1| hypothetical protein VITISV_017483 [Vitis vinifera] 111 7e-32 >emb|CAE75905.1| OSJNBa0088I22.18 [Oryza sativa Japonica Group] Length = 624 Score = 104 bits (259), Expect(2) = 6e-34 Identities = 57/126 (45%), Positives = 74/126 (58%), Gaps = 3/126 (2%) Frame = +3 Query: 147 FHLPPQIFGCVCFVHNLKPSRDKLDSRPIKCVFLGYSCTQKGYKCYSPHLRKSFVCADVT 326 F +PP++FGC CFV + +PS KLD R +KC+F+GYS QKGYKC+SP R++FV DVT Sbjct: 211 FIVPPKVFGCTCFVRDHRPSVGKLDPRAVKCIFIGYSSGQKGYKCWSPSERRTFVSMDVT 270 Query: 327 FFEDVPFYSSEGKMSSEPFEDCIMPSGGAGYDLGENEGASEEGALLAPTDNLP---KRDL 497 F E VPFY +SS F D P GEN + EE NLP ++ + Sbjct: 271 FRESVPFYGERTDLSS-LFVDLDNPIIDEDGQEGENGSSGEEFETGGEETNLPIAIRKGV 329 Query: 498 RSLDGR 515 RS G+ Sbjct: 330 RSNAGK 335 Score = 65.9 bits (159), Expect(2) = 6e-34 Identities = 32/55 (58%), Positives = 40/55 (72%) Frame = +1 Query: 4 RCLMFQTNLSKFYWAEAVLTATYLINRMPSSILGGKTPHSVLFLVNLFSIFPLKF 168 R LM+ N+ KF W+EAV+TATYLINRMPS ILG KTP+ ++F N F + P F Sbjct: 164 RSLMYTMNVPKFLWSEAVITATYLINRMPSRILGMKTPYEMVFGKNEFIVPPKVF 218 >gb|ABA95230.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 936 Score = 99.4 bits (246), Expect(2) = 2e-32 Identities = 50/102 (49%), Positives = 63/102 (61%) Frame = +3 Query: 147 FHLPPQIFGCVCFVHNLKPSRDKLDSRPIKCVFLGYSCTQKGYKCYSPHLRKSFVCADVT 326 F +PP++FGC CFV + +PS KLD R +KC+F+GYS QKGYKC+SP R++FV DVT Sbjct: 163 FIVPPKVFGCTCFVRDHRPSVGKLDPRAVKCIFIGYSSGQKGYKCWSPSERRTFVSMDVT 222 Query: 327 FFEDVPFYSSEGKMSSEPFEDCIMPSGGAGYDLGENEGASEE 452 F E VPFY +SS F D P GEN + E Sbjct: 223 FRESVPFYGERTDLSS-LFVDLDNPIIDEDGQEGENGSSGTE 263 Score = 65.9 bits (159), Expect(2) = 2e-32 Identities = 32/55 (58%), Positives = 40/55 (72%) Frame = +1 Query: 4 RCLMFQTNLSKFYWAEAVLTATYLINRMPSSILGGKTPHSVLFLVNLFSIFPLKF 168 R LM+ N+ KF W+EAV+TATYLINRMPS ILG KTP+ ++F N F + P F Sbjct: 116 RSLMYTMNVPKFLWSEAVMTATYLINRMPSRILGMKTPYEMVFGKNEFIVPPKVF 170 >emb|CAN62328.1| hypothetical protein VITISV_029806 [Vitis vinifera] Length = 996 Score = 110 bits (275), Expect(2) = 3e-32 Identities = 62/160 (38%), Positives = 87/160 (54%), Gaps = 3/160 (1%) Frame = +3 Query: 129 FPCQSFFHLPPQIFGCVCFVHNLKPSRDKLDSRPIKCVFLGYSCTQKGYKCYSPHLRKSF 308 FP Q + LPP++FGC CFVH L P +DKL ++ +KC+FLGYS QKGY+CYS + F Sbjct: 348 FPDQPLYFLPPRVFGCTCFVHILTPGQDKLSAKAMKCLFLGYSRLQKGYRCYSLETHRYF 407 Query: 309 VCADVTFFEDVPFYSSEGKMSSEPFEDCIMPSGGAGYDLGENEGASEEGALLAPTDNLPK 488 + ADVTFFED PF+S+ + S P + ++P +++P D +P Sbjct: 408 ISADVTFFEDSPFFSTTSE--SLPVSE-VLPI-----------------PIVSPPDAMPP 447 Query: 489 RDLRSLDGRVLGDRARP---VPTNSLPGARARPVPSVAIP 599 R L+ R P P +SLP A P P++ P Sbjct: 448 RPLQVYHRRPPVVAPLPFAKAPADSLPIPSASPAPALPFP 487 Score = 53.9 bits (128), Expect(2) = 3e-32 Identities = 23/43 (53%), Positives = 32/43 (74%) Frame = +1 Query: 4 RCLMFQTNLSKFYWAEAVLTATYLINRMPSSILGGKTPHSVLF 132 R ++ +N+ +W +AVLTA YLINRMPSS+L + PHS+LF Sbjct: 306 RTILLHSNVPFLFWGDAVLTACYLINRMPSSVLHDQIPHSLLF 348 >emb|CAN71185.1| hypothetical protein VITISV_014270 [Vitis vinifera] Length = 1024 Score = 112 bits (279), Expect(2) = 5e-32 Identities = 60/158 (37%), Positives = 88/158 (55%) Frame = +3 Query: 129 FPCQSFFHLPPQIFGCVCFVHNLKPSRDKLDSRPIKCVFLGYSCTQKGYKCYSPHLRKSF 308 FP Q + LPP++FGC CFVH L P +DKL ++ +KC+FLGYS QKGY+CYS + F Sbjct: 386 FPDQPLYFLPPRVFGCTCFVHILTPGQDKLSAKAMKCLFLGYSRLQKGYRCYSLETHRYF 445 Query: 309 VCADVTFFEDVPFYSSEGKMSSEPFEDCIMPSGGAGYDLGENEGASEEGALLAPTDNLPK 488 + ADVTFFED PF+S+ + S P + ++P +++P+D +P Sbjct: 446 ISADVTFFEDSPFFSTTSE--SLPVSE-VLPI-----------------PIVSPSDAMPP 485 Query: 489 RDLRSLDGRVLGDRARPVPTNSLPGARARPVPSVAIPE 602 R L++ P +SLP A P P++ P+ Sbjct: 486 RPLQA-------------PADSLPTPXASPAPALPSPD 510 Score = 51.6 bits (122), Expect(2) = 5e-32 Identities = 23/43 (53%), Positives = 31/43 (72%) Frame = +1 Query: 4 RCLMFQTNLSKFYWAEAVLTATYLINRMPSSILGGKTPHSVLF 132 R ++ N+ +W +AVLTA YLINRMPSS+L + PHS+LF Sbjct: 344 RTILLHGNVPFRFWGDAVLTACYLINRMPSSVLHDQIPHSLLF 386 >emb|CAN67119.1| hypothetical protein VITISV_017483 [Vitis vinifera] Length = 1970 Score = 111 bits (278), Expect(2) = 7e-32 Identities = 63/160 (39%), Positives = 89/160 (55%), Gaps = 3/160 (1%) Frame = +3 Query: 129 FPCQSFFHLPPQIFGCVCFVHNLKPSRDKLDSRPIKCVFLGYSCTQKGYKCYSPHLRKSF 308 FP Q + LPP++FGC CF+H L P +DKL ++ IKC+FLGYS QKGY+CYS + F Sbjct: 620 FPDQPLYFLPPRVFGCTCFIHILTPGQDKLSAKAIKCLFLGYSRLQKGYRCYSLETHRYF 679 Query: 309 VCADVTFFEDVPFYSSEGKMSSEPFEDCIMPSGGAGYDLGENEGASEEGALLAPTDNLPK 488 + ADVTFFED PF+S+ + S P + ++P +++P D +P Sbjct: 680 ISADVTFFEDSPFFSTTSE--SLPVSE-VLPI-----------------PIVSPPDAMPP 719 Query: 489 RDLRSLD--GRVLGDRARP-VPTNSLPGARARPVPSVAIP 599 R L+ RV+ P P +SLP A P P++ P Sbjct: 720 RPLQVYHRRPRVVAPLTFPEAPADSLPIPSASPAPALPSP 759 Score = 51.6 bits (122), Expect(2) = 7e-32 Identities = 23/43 (53%), Positives = 32/43 (74%) Frame = +1 Query: 4 RCLMFQTNLSKFYWAEAVLTATYLINRMPSSILGGKTPHSVLF 132 R L+ +++ +W +AVLTA YLINRMPSS+L + PHS+LF Sbjct: 578 RTLLLHSHVPFRFWGDAVLTACYLINRMPSSVLHDQIPHSLLF 620