BLASTX nr result

ID: Coptis25_contig00032568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032568
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148001.1| PREDICTED: glycerophosphodiester phosphodies...   125   5e-27
emb|CBI21310.3| unnamed protein product [Vitis vinifera]              123   1e-26
ref|XP_002273468.1| PREDICTED: glycerophosphodiester phosphodies...   123   1e-26
ref|XP_002328930.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
ref|XP_003553962.1| PREDICTED: glycerophosphodiester phosphodies...   116   2e-24

>ref|XP_004148001.1| PREDICTED: glycerophosphodiester phosphodiesterase gde1-like
           [Cucumis sativus]
          Length = 390

 Score =  125 bits (313), Expect = 5e-27
 Identities = 68/98 (69%), Positives = 79/98 (80%), Gaps = 5/98 (5%)
 Frame = -1

Query: 280 MALKAVHVSDVPNL-HLPKNTTSALYTDHVSKGVD----AFRVSVQSPQKFMVIGHRGSG 116
           MALKAVHVSDVPNL  +P N + ALY++  SKGV+    AFR S     KF+VIGHRGSG
Sbjct: 1   MALKAVHVSDVPNLDQVPANASLALYSNRFSKGVEFGQKAFRAS-----KFLVIGHRGSG 55

Query: 115 MNMLQSADRRMKAIKENTILSFNSAANFPVDFVEFDVQ 2
           MN LQS+DRRM+AIKEN+ILSFN+AA FP+DFVEFDVQ
Sbjct: 56  MNALQSSDRRMRAIKENSILSFNAAAKFPIDFVEFDVQ 93


>emb|CBI21310.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  123 bits (309), Expect = 1e-26
 Identities = 67/94 (71%), Positives = 76/94 (80%), Gaps = 1/94 (1%)
 Frame = -1

Query: 280 MALKAVHVSDVPNL-HLPKNTTSALYTDHVSKGVDAFRVSVQSPQKFMVIGHRGSGMNML 104
           MALKAVHVSDVP L  +P+N +  LY+   S GVD  R S + P KF+VIGHRGSGMNML
Sbjct: 1   MALKAVHVSDVPCLDQVPENASLGLYSTRFSAGVDVGRSSFRIP-KFLVIGHRGSGMNML 59

Query: 103 QSADRRMKAIKENTILSFNSAANFPVDFVEFDVQ 2
           QS+DRRMKAIKEN+ILSFN+AA F VDFVEFDVQ
Sbjct: 60  QSSDRRMKAIKENSILSFNTAAEFSVDFVEFDVQ 93


>ref|XP_002273468.1| PREDICTED: glycerophosphodiester phosphodiesterase GDE1 [Vitis
           vinifera] gi|147820259|emb|CAN71478.1| hypothetical
           protein VITISV_038621 [Vitis vinifera]
          Length = 382

 Score =  123 bits (309), Expect = 1e-26
 Identities = 67/94 (71%), Positives = 76/94 (80%), Gaps = 1/94 (1%)
 Frame = -1

Query: 280 MALKAVHVSDVPNL-HLPKNTTSALYTDHVSKGVDAFRVSVQSPQKFMVIGHRGSGMNML 104
           MALKAVHVSDVP L  +P+N +  LY+   S GVD  R S + P KF+VIGHRGSGMNML
Sbjct: 1   MALKAVHVSDVPCLDQVPENASLGLYSTRFSAGVDVGRSSFRIP-KFLVIGHRGSGMNML 59

Query: 103 QSADRRMKAIKENTILSFNSAANFPVDFVEFDVQ 2
           QS+DRRMKAIKEN+ILSFN+AA F VDFVEFDVQ
Sbjct: 60  QSSDRRMKAIKENSILSFNTAAEFSVDFVEFDVQ 93


>ref|XP_002328930.1| predicted protein [Populus trichocarpa] gi|222839360|gb|EEE77697.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/94 (64%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
 Frame = -1

Query: 280 MALKAVHVSDVPNL-HLPKNTTSALYTDHVSKGVDAFRVSVQSPQKFMVIGHRGSGMNML 104
           MALKAVHVSDVPNL H+P N + +LY+  +SKGV+  R +     KFMV GHRG+GMN+L
Sbjct: 1   MALKAVHVSDVPNLDHVPDNASLSLYSTRLSKGVEMNRAATFKMPKFMVAGHRGNGMNVL 60

Query: 103 QSADRRMKAIKENTILSFNSAANFPVDFVEFDVQ 2
           QS D RMK IKEN+I+SFNSAA  P+DF+EFDVQ
Sbjct: 61  QSTDGRMKEIKENSIMSFNSAAKHPIDFIEFDVQ 94


>ref|XP_003553962.1| PREDICTED: glycerophosphodiester phosphodiesterase GDE1-like
           isoform 1 [Glycine max]
          Length = 381

 Score =  116 bits (291), Expect = 2e-24
 Identities = 59/94 (62%), Positives = 77/94 (81%), Gaps = 1/94 (1%)
 Frame = -1

Query: 280 MALKAVHVSDVPNLHL-PKNTTSALYTDHVSKGVDAFRVSVQSPQKFMVIGHRGSGMNML 104
           MALKAVHV+DVP+L L P+N + AL +     G++  R  ++ P KF+VIGHRG+GMN+L
Sbjct: 1   MALKAVHVTDVPSLDLVPENASLALCSSRFPNGLEMCRSGLEIP-KFVVIGHRGNGMNVL 59

Query: 103 QSADRRMKAIKENTILSFNSAANFPVDFVEFDVQ 2
           QS+DRRM+AIKENTI+SFN+AA FP+DF+EFDVQ
Sbjct: 60  QSSDRRMRAIKENTIMSFNAAATFPLDFIEFDVQ 93


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