BLASTX nr result

ID: Coptis25_contig00032559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032559
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169178.1| PREDICTED: NF-X1-type zinc finger protein NF...   108   5e-22
ref|XP_004137514.1| PREDICTED: NF-X1-type zinc finger protein NF...   108   5e-22
emb|CAN70583.1| hypothetical protein VITISV_024983 [Vitis vinifera]   107   2e-21
ref|XP_002279249.2| PREDICTED: NF-X1-type zinc finger protein NF...   102   5e-20
emb|CBI15614.3| unnamed protein product [Vitis vinifera]              100   2e-19

>ref|XP_004169178.1| PREDICTED: NF-X1-type zinc finger protein NFXL1-like [Cucumis
            sativus]
          Length = 975

 Score =  108 bits (271), Expect = 5e-22
 Identities = 65/155 (41%), Positives = 82/155 (52%), Gaps = 13/155 (8%)
 Frame = +2

Query: 2    VLQNGGTSASSPGVNAWEGAEVTK-------INPWKKAVVQDTQWEECSWGSEDWS-DAT 157
            +LQNGG SASS   NAW G E  K        NPWK+AVVQD+ W++ SWG E+WS  + 
Sbjct: 829  LLQNGGASASS-NTNAWGGGENAKEGGASKSSNPWKRAVVQDSSWKDTSWGDEEWSGPSI 887

Query: 158  SVQPQVWKGKETLFAPSANRWKALDPDTFPKPMTVASSGTENSVEHGTGNSSGTESVSRV 337
             VQ  VWK +   F+ S NRW ALD +        + S +  S EH  GN  G  S+   
Sbjct: 888  DVQASVWKREAAPFSASLNRWHALDTEP-------SVSSSTQSPEHKLGNRVGNPSLGSE 940

Query: 338  HGLNLTGQIAGVTEV-----AEPSEVVDDWEKAFD 427
               + +    GV +V        SEV DDWEKA+D
Sbjct: 941  SSTSRSLSSGGVMQVVTDDGTNTSEVADDWEKAYD 975


>ref|XP_004137514.1| PREDICTED: NF-X1-type zinc finger protein NFXL1-like [Cucumis
            sativus]
          Length = 975

 Score =  108 bits (271), Expect = 5e-22
 Identities = 65/155 (41%), Positives = 82/155 (52%), Gaps = 13/155 (8%)
 Frame = +2

Query: 2    VLQNGGTSASSPGVNAWEGAEVTK-------INPWKKAVVQDTQWEECSWGSEDWS-DAT 157
            +LQNGG SASS   NAW G E  K        NPWK+AVVQD+ W++ SWG E+WS  + 
Sbjct: 829  LLQNGGASASS-NTNAWGGGENAKEGGASKSSNPWKRAVVQDSSWKDTSWGDEEWSGPSI 887

Query: 158  SVQPQVWKGKETLFAPSANRWKALDPDTFPKPMTVASSGTENSVEHGTGNSSGTESVSRV 337
             VQ  VWK +   F+ S NRW ALD +        + S +  S EH  GN  G  S+   
Sbjct: 888  DVQASVWKREAAPFSASLNRWHALDTEP-------SVSSSTQSPEHKLGNRVGNPSLGSE 940

Query: 338  HGLNLTGQIAGVTEV-----AEPSEVVDDWEKAFD 427
               + +    GV +V        SEV DDWEKA+D
Sbjct: 941  SSTSRSLSSGGVMQVVTDDGTNTSEVADDWEKAYD 975


>emb|CAN70583.1| hypothetical protein VITISV_024983 [Vitis vinifera]
          Length = 1025

 Score =  107 bits (266), Expect = 2e-21
 Identities = 61/148 (41%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
 Frame = +2

Query: 8    QNGGTSASSPGVNAWEGAEVTKI----NPWKKAVVQDTQWEECSWGSEDWS-DATSVQPQ 172
            QNG    +S G NAW GA         N WKKAVVQ++ W E SWG EDWS  +  +Q  
Sbjct: 884  QNGIAPVASQGANAWGGAAGGMAKEGRNQWKKAVVQESGWSESSWGGEDWSAGSVDLQAS 943

Query: 173  VWKGKETLFAPSANRWKALDPDTFPKPMTVASSGTENSVEHGTGNSSGTESVSRVH---G 343
            VWKGKE+    S NRW  L+P+       V+SS T +     +G   G +SV  +     
Sbjct: 944  VWKGKESPIVASVNRWNVLEPE------LVSSSSTSSVKTEDSGKRVGNQSVPGLEPSSS 997

Query: 344  LNLTGQIAGVTEVAEPSEVVDDWEKAFD 427
             + + +  G T  A+ SEVVDDWEKA++
Sbjct: 998  HSNSAETEGDTSEADASEVVDDWEKAYE 1025


>ref|XP_002279249.2| PREDICTED: NF-X1-type zinc finger protein NFXL1-like [Vitis vinifera]
          Length = 1850

 Score =  102 bits (254), Expect = 5e-20
 Identities = 59/145 (40%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
 Frame = +2

Query: 8    QNGGTSASSPGVNAWEGAEVTKI----NPWKKAVVQDTQWEECSWGSEDWS-DATSVQPQ 172
            QNG    +S G NAW G+         N WKKAVVQ++ W E SWG EDWS  +  +Q  
Sbjct: 953  QNGIAPVASQGANAWGGSAGGMAKEGRNQWKKAVVQESGWSESSWGGEDWSAGSVDLQAS 1012

Query: 173  VWKGKETLFAPSANRWKALDPDTFPKPMTVASSGTENSVEHGTGNSSGTESVSRVH---G 343
            VWKGKE+    S NRW  L+P+       V+SS T +     +G   G +SV  +     
Sbjct: 1013 VWKGKESPIVASVNRWNVLEPE------LVSSSSTSSVKTEDSGKRVGNQSVPGLEPSSS 1066

Query: 344  LNLTGQIAGVTEVAEPSEVVDDWEK 418
             + + +  G T  A+ SEVVDDWEK
Sbjct: 1067 HSNSAETEGDTSEADASEVVDDWEK 1091


>emb|CBI15614.3| unnamed protein product [Vitis vinifera]
          Length = 647

 Score =  100 bits (248), Expect = 2e-19
 Identities = 58/145 (40%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
 Frame = +2

Query: 8   QNGGTSASSPGVNAWEGAEVTKI----NPWKKAVVQDTQWEECSWGSEDWS-DATSVQPQ 172
           QNG    +S G NAW G+         N WKKAVVQ++ W E SWG EDWS  +  +Q  
Sbjct: 526 QNGIAPVASQGANAWGGSAGGMAKEGRNQWKKAVVQESGWSESSWGGEDWSAGSVDLQAS 585

Query: 173 VWKGKETLFAPSANRWKALDPDTFPKPMTVASSGTENSVEHGTGNSSGTESVSRVHGLNL 352
           VWKGKE+    S NRW  L+P+       V+SS T +     +G   G +SV        
Sbjct: 586 VWKGKESPIVASVNRWNVLEPE------LVSSSSTSSVKTEDSGKRVGNQSVP------- 632

Query: 353 TGQIAGVTEVAEPSEVVDDWEKAFD 427
                     A+ SEVVDDWEKA++
Sbjct: 633 ----------ADASEVVDDWEKAYE 647


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