BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032551
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat...   144   7e-33
ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat...   142   3e-32
ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31
ref|XP_003628710.1| Pentatricopeptide repeat-containing protein ...   136   2e-30
ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat...   134   6e-30

>ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
           gi|449493520|ref|XP_004159329.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  144 bits (363), Expect = 7e-33
 Identities = 66/90 (73%), Positives = 79/90 (87%)
 Frame = -3

Query: 270 GRLQEAKEFIGRMPFQPDAIGWATLLSSCRLHCNVEIGEWAADSLVKVEPHNPASYVLLS 91
           GRL+EAK FI +MPF PDAIGWATLLSSCRL+ N+EIG+WAA+SL K+EP NPASY+LLS
Sbjct: 522 GRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLS 581

Query: 90  KIYAAKGKWDDVARLKYDMRRRGMRKEPGY 1
            IYAAKGKWDDVA+L+  MR  G++KEPG+
Sbjct: 582 SIYAAKGKWDDVAKLRKGMREMGVKKEPGH 611


>ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  142 bits (358), Expect = 3e-32
 Identities = 63/89 (70%), Positives = 79/89 (88%)
 Frame = -3

Query: 270 GRLQEAKEFIGRMPFQPDAIGWATLLSSCRLHCNVEIGEWAADSLVKVEPHNPASYVLLS 91
           GRL+EA++FI +MPF PDAIGWA+LLSSCR H N+EIG+WAA+SL+K+EPHN ASY+LLS
Sbjct: 526 GRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLS 585

Query: 90  KIYAAKGKWDDVARLKYDMRRRGMRKEPG 4
            IYAAKGKW++VA L+  MR +G+RKEPG
Sbjct: 586 SIYAAKGKWEEVANLRKGMRDKGLRKEPG 614


>ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|222863951|gb|EEF01082.1|
           predicted protein [Populus trichocarpa]
          Length = 743

 Score =  137 bits (345), Expect = 9e-31
 Identities = 61/90 (67%), Positives = 77/90 (85%)
 Frame = -3

Query: 270 GRLQEAKEFIGRMPFQPDAIGWATLLSSCRLHCNVEIGEWAADSLVKVEPHNPASYVLLS 91
           GRL+EAK FI +MPF PD+IGWATLLSSCRL+ N EIG+WAA+SL++++P NPA Y+LLS
Sbjct: 522 GRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLS 581

Query: 90  KIYAAKGKWDDVARLKYDMRRRGMRKEPGY 1
            IYAAKGKW +VA+L+  MR +G RKEPG+
Sbjct: 582 SIYAAKGKWSNVAQLRRGMREKGARKEPGF 611


>ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355522732|gb|AET03186.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  136 bits (343), Expect = 2e-30
 Identities = 59/89 (66%), Positives = 78/89 (87%)
 Frame = -3

Query: 270 GRLQEAKEFIGRMPFQPDAIGWATLLSSCRLHCNVEIGEWAADSLVKVEPHNPASYVLLS 91
           GR++EA+ FI +MPF PDAI WATLLSSCR + N++IG+WAA+ L++++PHN ASYVLLS
Sbjct: 527 GRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLS 586

Query: 90  KIYAAKGKWDDVARLKYDMRRRGMRKEPG 4
            +YAAKGKW++VARL+ DMR +G+RKEPG
Sbjct: 587 SVYAAKGKWEEVARLRKDMRDKGLRKEPG 615


>ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera] gi|297738214|emb|CBI27415.3|
           unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  134 bits (338), Expect = 6e-30
 Identities = 60/90 (66%), Positives = 75/90 (83%)
 Frame = -3

Query: 270 GRLQEAKEFIGRMPFQPDAIGWATLLSSCRLHCNVEIGEWAADSLVKVEPHNPASYVLLS 91
           GRL+EA+ FI  MP  PD +GWATLLSSCR+H ++EIG+WAADSL+ +EP NPASYVLLS
Sbjct: 522 GRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLS 581

Query: 90  KIYAAKGKWDDVARLKYDMRRRGMRKEPGY 1
            +YA+KGKWD VA+L+  MR + +RKEPGY
Sbjct: 582 SLYASKGKWDKVAQLRRGMRDKRVRKEPGY 611