BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032541
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322376.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containi...   124   9e-27
emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]   124   9e-27
ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp....   117   1e-24

>ref|XP_002322376.1| predicted protein [Populus trichocarpa] gi|222869372|gb|EEF06503.1|
           predicted protein [Populus trichocarpa]
          Length = 715

 Score =  134 bits (336), Expect = 1e-29
 Identities = 68/128 (53%), Positives = 89/128 (69%)
 Frame = -3

Query: 384 EQLQTQSFISNICNLVQQSYHHQHLHLTSSFKHKPLYLQLTPCLITPEQAVTIFASLFTH 205
           + LQ QS + +IC+LV +SY  Q  H+    +   + L + P  +T EQA+T+ ASL + 
Sbjct: 60  QHLQQQSLVRSICSLVCESYSQQTPHVRL-LQSPSINLSVNPDSLTHEQAITVVASLASE 118

Query: 204 AGSMVALSFFYWAVSLPEFRYFMRFYIIPTTCFIDSGNLERAHEVMRCLVESFAEIGKVN 25
           AGSMVALSFF WA+  P+FRYFMRFYI+  T FI + N ERAHEVM C+V  FAEIGK  
Sbjct: 119 AGSMVALSFFNWAIGFPKFRYFMRFYIVCATSFIGNENFERAHEVMDCMVRVFAEIGKFQ 178

Query: 24  DAVNLVID 1
           +AVN+VI+
Sbjct: 179 EAVNMVIE 186


>ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  124 bits (311), Expect = 9e-27
 Identities = 64/128 (50%), Positives = 88/128 (68%), Gaps = 1/128 (0%)
 Frame = -3

Query: 381 QLQTQSFISNICNLVQQSYHHQ-HLHLTSSFKHKPLYLQLTPCLITPEQAVTIFASLFTH 205
           Q  +QS +  IC+LV QSY+ Q H+  T    H PL  +     +T +QA+T+ ASL   
Sbjct: 56  QSHSQSVVRTICSLVCQSYYQQTHVRFTPPKLHLPLDSES----LTHDQAITVVASLADE 111

Query: 204 AGSMVALSFFYWAVSLPEFRYFMRFYIIPTTCFIDSGNLERAHEVMRCLVESFAEIGKVN 25
           AGSMVALSF YWA+  P+FR+FMR YI+  T  I + NLERA+EVM+C+V +FAE GK+ 
Sbjct: 112 AGSMVALSFLYWAIGFPKFRHFMRLYIVSATALIGNKNLERANEVMQCMVMNFAENGKLK 171

Query: 24  DAVNLVID 1
           +AVN+V++
Sbjct: 172 EAVNMVVE 179


>emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  124 bits (311), Expect = 9e-27
 Identities = 64/128 (50%), Positives = 88/128 (68%), Gaps = 1/128 (0%)
 Frame = -3

Query: 381 QLQTQSFISNICNLVQQSYHHQ-HLHLTSSFKHKPLYLQLTPCLITPEQAVTIFASLFTH 205
           Q  +QS +  IC+LV QSY+ Q H+  T    H PL  +     +T +QA+T+ ASL   
Sbjct: 56  QSHSQSVVRTICSLVCQSYYQQTHVRFTPPKLHLPLDSES----LTHDQAITVVASLADE 111

Query: 204 AGSMVALSFFYWAVSLPEFRYFMRFYIIPTTCFIDSGNLERAHEVMRCLVESFAEIGKVN 25
           AGSMVALSF YWA+  P+FR+FMR YI+  T  I + NLERA+EVM+C+V +FAE GK+ 
Sbjct: 112 AGSMVALSFLYWAIGFPKFRHFMRLYIVSATALIGNKNLERANEVMQCMVMNFAENGKLK 171

Query: 24  DAVNLVID 1
           +AVN+V++
Sbjct: 172 EAVNMVVE 179


>ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  124 bits (310), Expect = 1e-26
 Identities = 61/123 (49%), Positives = 86/123 (69%)
 Frame = -3

Query: 369 QSFISNICNLVQQSYHHQHLHLTSSFKHKPLYLQLTPCLITPEQAVTIFASLFTHAGSMV 190
           QS ++ +C+LV  SYHH + H  + F    L+L + P  +T +QAVTI ASL + AGSMV
Sbjct: 37  QSTVTRVCSLVYDSYHHHYNH--ARFSPPTLHLDVDPNSLTHDQAVTIVASLASDAGSMV 94

Query: 189 ALSFFYWAVSLPEFRYFMRFYIIPTTCFIDSGNLERAHEVMRCLVESFAEIGKVNDAVNL 10
           ALSFF WA++  +FR+F R YI      I + N E+AHEVM+C+V+SFAEIG+V +A+ +
Sbjct: 95  ALSFFNWAIASSKFRHFTRLYIACAASLISNKNFEKAHEVMQCMVKSFAEIGRVKEAIEM 154

Query: 9   VID 1
           VI+
Sbjct: 155 VIE 157


>ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313749|gb|EFH44172.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/124 (45%), Positives = 86/124 (69%)
 Frame = -3

Query: 372 TQSFISNICNLVQQSYHHQHLHLTSSFKHKPLYLQLTPCLITPEQAVTIFASLFTHAGSM 193
           +QS + ++C+LV  SY  Q+  + S  +   + L      +T EQA+T+ ASL + +GSM
Sbjct: 75  SQSLVKSVCSLVYNSYLRQNHVIQSPHR---VNLDFDANSLTHEQAITVVASLASESGSM 131

Query: 192 VALSFFYWAVSLPEFRYFMRFYIIPTTCFIDSGNLERAHEVMRCLVESFAEIGKVNDAVN 13
           VAL FFYWAV   +FR+FMR Y++     I +GNL++AHEVMRC++ +F+EIG++N+AV 
Sbjct: 132 VALCFFYWAVGFEKFRHFMRLYLVTADSLIANGNLQKAHEVMRCMLRNFSEIGRLNEAVG 191

Query: 12  LVID 1
           +V+D
Sbjct: 192 MVMD 195