BLASTX nr result

ID: Coptis25_contig00032540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032540
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527213.1| Thermostable beta-glucosidase B, putative [R...   186   2e-45
ref|XP_003612944.1| Beta-D-xylosidase [Medicago truncatula] gi|3...   178   5e-43
ref|XP_002299457.1| predicted protein [Populus trichocarpa] gi|2...   177   1e-42
ref|XP_004160150.1| PREDICTED: probable beta-D-xylosidase 6-like...   176   2e-42
ref|XP_004143540.1| PREDICTED: probable beta-D-xylosidase 6-like...   176   2e-42

>ref|XP_002527213.1| Thermostable beta-glucosidase B, putative [Ricinus communis]
           gi|223533389|gb|EEF35139.1| Thermostable
           beta-glucosidase B, putative [Ricinus communis]
          Length = 454

 Score =  186 bits (472), Expect = 2e-45
 Identities = 83/103 (80%), Positives = 95/103 (92%)
 Frame = +2

Query: 5   ALASKRPLVLILTGGGPLDVSFAKEDTKIASILWAGYPGEAGGLALADVIFGEYNPGGRL 184
           A ASK+P++L+LTGGGP+DVSFAK D++IASILW GYPGEAG  ALAD+IFGEYNPGGRL
Sbjct: 200 AAASKKPVILVLTGGGPVDVSFAKRDSRIASILWIGYPGEAGAKALADIIFGEYNPGGRL 259

Query: 185 PMTWYPESFTSVPMNDMRMRSDLSHGYPGRTYRFYTGERVYGF 313
           PMTWYPESFT+VPMNDM MR++ + GYPGRTYRFYTGERVYGF
Sbjct: 260 PMTWYPESFTNVPMNDMNMRANPNRGYPGRTYRFYTGERVYGF 302


>ref|XP_003612944.1| Beta-D-xylosidase [Medicago truncatula] gi|355514279|gb|AES95902.1|
           Beta-D-xylosidase [Medicago truncatula]
          Length = 783

 Score =  178 bits (451), Expect = 5e-43
 Identities = 80/103 (77%), Positives = 91/103 (88%)
 Frame = +2

Query: 5   ALASKRPLVLILTGGGPLDVSFAKEDTKIASILWAGYPGEAGGLALADVIFGEYNPGGRL 184
           A ASKRP++L+LTGGGPLDVSFA+ +  I SILW GYPGEAGG ALA++IFGE+NP GRL
Sbjct: 526 AAASKRPVILVLTGGGPLDVSFAESNQLITSILWIGYPGEAGGKALAEIIFGEFNPAGRL 585

Query: 185 PMTWYPESFTSVPMNDMRMRSDLSHGYPGRTYRFYTGERVYGF 313
           PMTWYPESFT+VPMNDM MR+D S GYPGRTYRFYTG R+YGF
Sbjct: 586 PMTWYPESFTNVPMNDMGMRADPSRGYPGRTYRFYTGSRIYGF 628


>ref|XP_002299457.1| predicted protein [Populus trichocarpa] gi|222846715|gb|EEE84262.1|
           predicted protein [Populus trichocarpa]
          Length = 780

 Score =  177 bits (448), Expect = 1e-42
 Identities = 81/103 (78%), Positives = 89/103 (86%)
 Frame = +2

Query: 5   ALASKRPLVLILTGGGPLDVSFAKEDTKIASILWAGYPGEAGGLALADVIFGEYNPGGRL 184
           A ASK+P++L+LTGGGPLDVSFAK D +IASILW GYPGEAG  ALA++IFGEYNPGGRL
Sbjct: 526 AAASKKPVILVLTGGGPLDVSFAKGDPRIASILWIGYPGEAGAKALAEIIFGEYNPGGRL 585

Query: 185 PMTWYPESFTSVPMNDMRMRSDLSHGYPGRTYRFYTGERVYGF 313
           PMTWYPESFT V M DM MR + S GYPGRTYRFYTG RVYGF
Sbjct: 586 PMTWYPESFTEVSMTDMNMRPNPSRGYPGRTYRFYTGNRVYGF 628


>ref|XP_004160150.1| PREDICTED: probable beta-D-xylosidase 6-like, partial [Cucumis
           sativus]
          Length = 767

 Score =  176 bits (445), Expect = 2e-42
 Identities = 76/103 (73%), Positives = 93/103 (90%)
 Frame = +2

Query: 5   ALASKRPLVLILTGGGPLDVSFAKEDTKIASILWAGYPGEAGGLALADVIFGEYNPGGRL 184
           A  SK+P++L+L GGGPLD+SFAK+D+++ASILW G PGEAGG ALA+VIFG+YNPGGRL
Sbjct: 512 ASVSKKPIILVLIGGGPLDISFAKKDSRVASILWIGNPGEAGGKALAEVIFGDYNPGGRL 571

Query: 185 PMTWYPESFTSVPMNDMRMRSDLSHGYPGRTYRFYTGERVYGF 313
           P+TWYP+SFT+VPMNDM MR + S GYPGRTYRFYTG+R+YGF
Sbjct: 572 PVTWYPQSFTNVPMNDMHMRPNPSRGYPGRTYRFYTGDRIYGF 614


>ref|XP_004143540.1| PREDICTED: probable beta-D-xylosidase 6-like [Cucumis sativus]
          Length = 777

 Score =  176 bits (445), Expect = 2e-42
 Identities = 76/103 (73%), Positives = 93/103 (90%)
 Frame = +2

Query: 5   ALASKRPLVLILTGGGPLDVSFAKEDTKIASILWAGYPGEAGGLALADVIFGEYNPGGRL 184
           A  SK+P++L+L GGGPLD+SFAK+D+++ASILW G PGEAGG ALA+VIFG+YNPGGRL
Sbjct: 522 ASVSKKPIILVLIGGGPLDISFAKKDSRVASILWIGNPGEAGGKALAEVIFGDYNPGGRL 581

Query: 185 PMTWYPESFTSVPMNDMRMRSDLSHGYPGRTYRFYTGERVYGF 313
           P+TWYP+SFT+VPMNDM MR + S GYPGRTYRFYTG+R+YGF
Sbjct: 582 PVTWYPQSFTNVPMNDMHMRPNPSRGYPGRTYRFYTGDRIYGF 624


Top