BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032524
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002720156.1| ORF126 [Jatropha curcas] gi|225544183|ref|YP...    82   3e-14
ref|YP_004891653.1| unnamed protein product (chloroplast) [Nicot...    41   1e-06

>ref|YP_002720156.1| ORF126 [Jatropha curcas] gi|225544183|ref|YP_002720173.1| ORF126
           [Jatropha curcas] gi|224979608|gb|ACN72735.1| ORF126
           [Jatropha curcas] gi|224979624|gb|ACN72751.1| ORF126
           [Jatropha curcas]
          Length = 126

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 41/58 (70%), Positives = 44/58 (75%)
 Frame = -3

Query: 286 RYIDTI*TSGKMPARNPTDKVH*IVHFRDWRLTHSVTLALGVPKMGTIGSGEFDKYTD 113
           R +DTI TSGKMPARNPTDKVH IV FRDWRLTHSVTLAL VPK   + SG  +   D
Sbjct: 26  RVVDTIETSGKMPARNPTDKVHYIVRFRDWRLTHSVTLALDVPKRKWVLSGRVNSIID 83


>ref|YP_004891653.1| unnamed protein product (chloroplast) [Nicotiana undulata]
           gi|351653955|ref|YP_004891682.1| unnamed protein product
           (chloroplast) [Nicotiana undulata]
           gi|11873|emb|CAA77388.1| hypothetical protein [Nicotiana
           tabacum] gi|1223685|emb|CAA77405.1| hypothetical protein
           [Nicotiana tabacum] gi|77799611|dbj|BAE46700.1|
           hypothetical protein [Nicotiana sylvestris]
           gi|77799641|dbj|BAE46730.1| hypothetical protein
           [Nicotiana sylvestris] gi|80750973|dbj|BAE48049.1|
           hypothetical protein [Nicotiana tomentosiformis]
           gi|80751003|dbj|BAE48079.1| hypothetical protein
           [Nicotiana tomentosiformis] gi|347453933|gb|AEO95591.1|
           hypothetical protein (chloroplast) [Nicotiana undulata]
           gi|347453981|gb|AEO95639.1| hypothetical protein
           (chloroplast) [Nicotiana undulata]
           gi|347454044|gb|AEO95701.1| hypothetical protein
           [synthetic construct] gi|347454090|gb|AEO95747.1|
           hypothetical protein [synthetic construct]
           gi|225244|prf||1211235CC ORF 115
          Length = 115

 Score = 41.2 bits (95), Expect(2) = 1e-06
 Identities = 19/22 (86%), Positives = 19/22 (86%)
 Frame = -2

Query: 203 GLATYSFSDFGTGRSQNGYYWV 138
           GLATY FSDFGTGRSQNG Y V
Sbjct: 91  GLATYPFSDFGTGRSQNGDYRV 112



 Score = 35.8 bits (81), Expect(2) = 1e-06
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = -3

Query: 265 TSGKMPARNPTDKVH*IV 212
           TSGKMPARNP DKVH IV
Sbjct: 72  TSGKMPARNPADKVHYIV 89