BLASTX nr result

ID: Coptis25_contig00032523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032523
         (830 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20222.3| unnamed protein product [Vitis vinifera]              257   3e-66
ref|XP_002282960.1| PREDICTED: uncharacterized protein LOC100241...   257   3e-66
ref|XP_002298902.1| predicted protein [Populus trichocarpa] gi|2...   255   7e-66
ref|XP_002333123.1| predicted protein [Populus trichocarpa] gi|2...   254   2e-65
ref|XP_003541824.1| PREDICTED: uncharacterized protein LOC100798...   226   4e-57

>emb|CBI20222.3| unnamed protein product [Vitis vinifera]
          Length = 661

 Score =  257 bits (656), Expect = 3e-66
 Identities = 141/284 (49%), Positives = 182/284 (64%), Gaps = 9/284 (3%)
 Frame = -3

Query: 825  NIALGSLLTDDGRPSIPNIKRLFESFDHDNDNYISHSELEQLIRGMKIEKIGFNREEVVA 646
            N  LGSLL +D  P I NIK LFE  D D DN IS +EL++LI  +K   +  + +E VA
Sbjct: 375  NSGLGSLLKEDNTPDIANIKSLFERIDLDGDNCISQAELKELIMSIKFGDMPLDVDEAVA 434

Query: 645  ELMKVLDKDGNQKIDEKEFVDGVANLLGLTTV---------DDIFLETWKETDKVLDDEK 493
             +M+ LD +G++ IDE+EF+ G+A  + +++          D+IFL+ WKETD++++   
Sbjct: 435  RIMEKLDVNGDRLIDEEEFIQGLAKWVNISSHQALQSPKPNDEIFLKAWKETDELVE--- 491

Query: 492  ETKGQKYDGHLSEWFNSIXXXXXXXXXXXXLAEPLVESVQNFSEAAGIPPFFVSFVLVPL 313
            +T     D     WF +I            LAEPL+ SVQ+FS AA I  FF++F+LVPL
Sbjct: 492  QTSAGPVDKSPWAWFKAIMLLLAGILILSVLAEPLIHSVQSFSTAANISSFFIAFILVPL 551

Query: 312  ATNSREAVSAIVSASHRKPRTTSLAFSEIYGGVFTNNVLGLSLLLSIVYGRGLTWDFSAE 133
            ATN+R A SAI +AS RK RTTSL FSEIYGGVF NNVLG+S+LLSI+Y R LTWDFSAE
Sbjct: 552  ATNARAATSAISAASRRKERTTSLTFSEIYGGVFMNNVLGISVLLSIIYVRELTWDFSAE 611

Query: 132  VXXXXXXXXXXXXXGSLRTKFPVWTCFIAYLLYPFSLMFVYVLD 1
            V              SLR+ FPVWT  +AYLLYP SL+ VY LD
Sbjct: 612  VLVVMIVCVVMGMFASLRSTFPVWTSIVAYLLYPLSLLLVYALD 655



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
 Frame = -3

Query: 819 ALGSLLTDDGRPSIPNIKRLFESFDHDNDNYISHSELEQLIRGMKIEKIG-FNREEVVAE 643
           A+G LLTD+G P+I  I+ LFE  D D D+YIS +E+++L+ G++  K    N+E+ V +
Sbjct: 239 AVGKLLTDEGAPNISVIRGLFEETDLDGDDYISPAEIKELLLGIRFRKPHLINKEDAVLD 298

Query: 642 LMKVLDKDGNQKIDEKEFVDGVANLLGLT 556
           ++   D DG+  I + EF+ G++  L  T
Sbjct: 299 VLGQFDIDGDGTITKDEFIAGISKWLDET 327


>ref|XP_002282960.1| PREDICTED: uncharacterized protein LOC100241883 [Vitis vinifera]
          Length = 695

 Score =  257 bits (656), Expect = 3e-66
 Identities = 141/284 (49%), Positives = 182/284 (64%), Gaps = 9/284 (3%)
 Frame = -3

Query: 825  NIALGSLLTDDGRPSIPNIKRLFESFDHDNDNYISHSELEQLIRGMKIEKIGFNREEVVA 646
            N  LGSLL +D  P I NIK LFE  D D DN IS +EL++LI  +K   +  + +E VA
Sbjct: 409  NSGLGSLLKEDNTPDIANIKSLFERIDLDGDNCISQAELKELIMSIKFGDMPLDVDEAVA 468

Query: 645  ELMKVLDKDGNQKIDEKEFVDGVANLLGLTTV---------DDIFLETWKETDKVLDDEK 493
             +M+ LD +G++ IDE+EF+ G+A  + +++          D+IFL+ WKETD++++   
Sbjct: 469  RIMEKLDVNGDRLIDEEEFIQGLAKWVNISSHQALQSPKPNDEIFLKAWKETDELVE--- 525

Query: 492  ETKGQKYDGHLSEWFNSIXXXXXXXXXXXXLAEPLVESVQNFSEAAGIPPFFVSFVLVPL 313
            +T     D     WF +I            LAEPL+ SVQ+FS AA I  FF++F+LVPL
Sbjct: 526  QTSAGPVDKSPWAWFKAIMLLLAGILILSVLAEPLIHSVQSFSTAANISSFFIAFILVPL 585

Query: 312  ATNSREAVSAIVSASHRKPRTTSLAFSEIYGGVFTNNVLGLSLLLSIVYGRGLTWDFSAE 133
            ATN+R A SAI +AS RK RTTSL FSEIYGGVF NNVLG+S+LLSI+Y R LTWDFSAE
Sbjct: 586  ATNARAATSAISAASRRKERTTSLTFSEIYGGVFMNNVLGISVLLSIIYVRELTWDFSAE 645

Query: 132  VXXXXXXXXXXXXXGSLRTKFPVWTCFIAYLLYPFSLMFVYVLD 1
            V              SLR+ FPVWT  +AYLLYP SL+ VY LD
Sbjct: 646  VLVVMIVCVVMGMFASLRSTFPVWTSIVAYLLYPLSLLLVYALD 689



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
 Frame = -3

Query: 819 ALGSLLTDDGRPSIPNIKRLFESFDHDNDNYISHSELEQLIRGMKIEKIG-FNREEVVAE 643
           A+G LLTD+G P+I  I+ LFE  D D D+YIS +E+++L+ G++  K    N+E+ V +
Sbjct: 273 AVGKLLTDEGAPNISVIRGLFEETDLDGDDYISPAEIKELLLGIRFRKPHLINKEDAVLD 332

Query: 642 LMKVLDKDGNQKIDEKEFVDGVANLLGLT 556
           ++   D DG+  I + EF+ G++  L  T
Sbjct: 333 VLGQFDIDGDGTITKDEFIAGISKWLDET 361


>ref|XP_002298902.1| predicted protein [Populus trichocarpa] gi|222846160|gb|EEE83707.1|
            predicted protein [Populus trichocarpa]
          Length = 720

 Score =  255 bits (652), Expect = 7e-66
 Identities = 141/285 (49%), Positives = 180/285 (63%), Gaps = 10/285 (3%)
 Frame = -3

Query: 825  NIALGSLLTDDGRPSIPNIKRLFESFDHDNDNYISHSELEQLIRGMKIEKIGFNREEVVA 646
            ++ALG+L+ +DG P +  I+RLFE  D D DN IS  EL++L++ ++I KI ++ +E   
Sbjct: 433  SVALGNLIKEDGTPDLLAIRRLFEDIDRDEDNCISKDELKELMKKIEIGKISWDVDEAAE 492

Query: 645  ELMKVLDKDGNQKIDEKEFVDGVANLL-----GLTTV-----DDIFLETWKETDKVLDDE 496
            ++M+ LD  G+Q IDEKEF +G+ + L      +T V     DD    TW+E DK+L DE
Sbjct: 493  KIMEALDTSGDQMIDEKEFAEGIVSWLINTSENVTPVSSRSQDDNNRRTWEEVDKLLKDE 552

Query: 495  KETKGQKYDGHLSEWFNSIXXXXXXXXXXXXLAEPLVESVQNFSEAAGIPPFFVSFVLVP 316
            K     K       WF +I            LAEPL+ SVQNFSE AGIP FFVSFVL P
Sbjct: 553  KTNAVDKSSW---AWFKAIMSMVLGVAILSVLAEPLIHSVQNFSEDAGIPSFFVSFVLAP 609

Query: 315  LATNSREAVSAIVSASHRKPRTTSLAFSEIYGGVFTNNVLGLSLLLSIVYGRGLTWDFSA 136
            LATN+R A SAI +A  +K  TTSL FSEIYGGVF NNVLG S+LL +VY RGLTW+FSA
Sbjct: 610  LATNARAATSAITTACRKKSITTSLTFSEIYGGVFMNNVLGCSVLLFLVYARGLTWEFSA 669

Query: 135  EVXXXXXXXXXXXXXGSLRTKFPVWTCFIAYLLYPFSLMFVYVLD 1
            EV              S R+ FP+WT F+A+LLYPFSL  VYV +
Sbjct: 670  EVLVVLITCAIMSLAVSFRSDFPLWTSFMAFLLYPFSLFLVYVFN 714



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 35/78 (44%), Positives = 52/78 (66%)
 Frame = -3

Query: 819 ALGSLLTDDGRPSIPNIKRLFESFDHDNDNYISHSELEQLIRGMKIEKIGFNREEVVAEL 640
           ALG +LT DG P+I  I+RLFE  D D D+ IS SE+ +L+  +K   +  N++    EL
Sbjct: 298 ALGIILTGDGAPNINAIQRLFEEIDEDGDDCISPSEVRKLLLDIKSTGMNINKDSASEEL 357

Query: 639 MKVLDKDGNQKIDEKEFV 586
           +KVLD + ++KI ++EFV
Sbjct: 358 IKVLDLNDDKKITKEEFV 375


>ref|XP_002333123.1| predicted protein [Populus trichocarpa] gi|222869502|gb|EEF06633.1|
            predicted protein [Populus trichocarpa]
          Length = 517

 Score =  254 bits (648), Expect = 2e-65
 Identities = 142/283 (50%), Positives = 179/283 (63%), Gaps = 10/283 (3%)
 Frame = -3

Query: 819  ALGSLLTDDGRPSIPNIKRLFESFDHDNDNYISHSELEQLIRGMKIEKIGFNREEVVAEL 640
            ALGS+LT +G P+I  I+RLFE  D D DN IS  EL++L++ ++I KI ++ +E   ++
Sbjct: 232  ALGSILTGEGAPNINAIQRLFEEIDRDADNCISKDELKELMKKIEIGKISWDVDEAAEKI 291

Query: 639  MKVLDKDGNQKIDEKEFVDGVANLL-----GLTTV-----DDIFLETWKETDKVLDDEKE 490
            M+ LD  G+Q IDEKEF +G+ + L      +T V     DD    TW+E DK+L DEK 
Sbjct: 292  MEALDTSGDQMIDEKEFAEGIVSWLINTSENVTPVSSRSQDDNNRRTWEEVDKLLKDEKT 351

Query: 489  TKGQKYDGHLSEWFNSIXXXXXXXXXXXXLAEPLVESVQNFSEAAGIPPFFVSFVLVPLA 310
                K       WF +I            LAEPL+ SVQNFSE AGIP FFVSFVLVPLA
Sbjct: 352  NAVDKSSW---AWFKAIMSMVLGVAILSVLAEPLIHSVQNFSEDAGIPSFFVSFVLVPLA 408

Query: 309  TNSREAVSAIVSASHRKPRTTSLAFSEIYGGVFTNNVLGLSLLLSIVYGRGLTWDFSAEV 130
            TN+R A SAI +A  +K  TTSL FSEIYGGVF NNVLG S+LL +VY RGLTW+FSAEV
Sbjct: 409  TNARAATSAITTACRKKSITTSLTFSEIYGGVFMNNVLGCSVLLFLVYARGLTWEFSAEV 468

Query: 129  XXXXXXXXXXXXXGSLRTKFPVWTCFIAYLLYPFSLMFVYVLD 1
                          S  + FP+WT F+A+LLYPFSL+  YV +
Sbjct: 469  LVVLITCAIMSLVVSFHSDFPLWTSFMAFLLYPFSLLLAYVFN 511


>ref|XP_003541824.1| PREDICTED: uncharacterized protein LOC100798009 [Glycine max]
          Length = 708

 Score =  226 bits (577), Expect = 4e-57
 Identities = 126/282 (44%), Positives = 170/282 (60%), Gaps = 10/282 (3%)
 Frame = -3

Query: 816  LGSLLTDDGRPSIPNIKRLFESFDHDNDNYISHSELEQLIRGMKIEKIGFNREEVVAELM 637
            +GSLLT+DG+P    I+ LFE  D + DN+IS SEL++LI  +K  K     EE VA ++
Sbjct: 424  VGSLLTEDGKPDQHAIRGLFEKIDRNRDNFISQSELKELIMNIKFVKASMEVEEAVALVI 483

Query: 636  KVLDKDGNQKIDEKEFVDGVANLLGLTTV----------DDIFLETWKETDKVLDDEKET 487
            + LD D ++ I+EKEFV G    L  T+           +D+F +TW+E D V+++ +  
Sbjct: 484  EELDIDKDRTINEKEFVAGFEKWLSSTSAPAPVSDSESQEDMF-QTWEEADIVVEERQNN 542

Query: 486  KGQKYDGHLSEWFNSIXXXXXXXXXXXXLAEPLVESVQNFSEAAGIPPFFVSFVLVPLAT 307
                 D  +  W  +I            LAEPL ESV NFS +AG  PFF+SF+L PLAT
Sbjct: 543  A--VVDKSIWAWIKAITYVMLGIAMLSILAEPLTESVHNFSNSAGFHPFFMSFILAPLAT 600

Query: 306  NSREAVSAIVSASHRKPRTTSLAFSEIYGGVFTNNVLGLSLLLSIVYGRGLTWDFSAEVX 127
            N+REA SAI  ASH+KPRTTSLA SEIYGGVF NN+LG   +  +++ R +TW FSAE+ 
Sbjct: 601  NAREATSAIKEASHKKPRTTSLAISEIYGGVFMNNILGFFAISVLIFVREVTWQFSAELL 660

Query: 126  XXXXXXXXXXXXGSLRTKFPVWTCFIAYLLYPFSLMFVYVLD 1
                         S  + FP+W+ FIA LLYP SL+ V++LD
Sbjct: 661  VVAIVCAITGITASFHSIFPIWSSFIAILLYPLSLVLVFILD 702



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 31/87 (35%), Positives = 53/87 (60%)
 Frame = -3

Query: 816 LGSLLTDDGRPSIPNIKRLFESFDHDNDNYISHSELEQLIRGMKIEKIGFNREEVVAELM 637
           L  + T +G P++  I+RL+   D D  + IS SE++ L+   K+ +  F+ E+ + E++
Sbjct: 287 LQRIFTKNGTPNVSAIRRLYREIDQDGSSGISASEVKDLLLKNKVTETNFDEEKEIKEVL 346

Query: 636 KVLDKDGNQKIDEKEFVDGVANLLGLT 556
           KV D DG++KI+++EFV G    L  T
Sbjct: 347 KVFDLDGDKKINKEEFVSGFTKWLDQT 373


Top