BLASTX nr result

ID: Coptis25_contig00032522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032522
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303344.1| predicted protein [Populus trichocarpa] gi|2...   306   1e-81
ref|XP_002335114.1| predicted protein [Populus trichocarpa] gi|2...   304   7e-81
ref|XP_002337878.1| predicted protein [Populus trichocarpa] gi|2...   301   4e-80
ref|XP_003631194.1| PREDICTED: polygalacturonase QRT3-like [Viti...   297   6e-79
emb|CAN67113.1| hypothetical protein VITISV_025312 [Vitis vinifera]   297   6e-79

>ref|XP_002303344.1| predicted protein [Populus trichocarpa] gi|222840776|gb|EEE78323.1|
           predicted protein [Populus trichocarpa]
          Length = 489

 Score =  306 bits (785), Expect = 1e-81
 Identities = 146/179 (81%), Positives = 164/179 (91%)
 Frame = +2

Query: 2   INLMGNDNAVTDVVIFSGAIGVMVSGQANTLSGVHCYNKATGWGGTGIYLQLPGLTQTRI 181
           INLMGNDNAVTDVVIFS AIGVM+SGQANTLSGVHCYNKATG+GGTGIYL+LP LTQTRI
Sbjct: 264 INLMGNDNAVTDVVIFSAAIGVMISGQANTLSGVHCYNKATGFGGTGIYLKLPSLTQTRI 323

Query: 182 VNCYMDYTGIVAEDPVQLHISSSFFLGDAFILFKSIKGIMNGVNVVDNMFSGSGKGINIV 361
           +NCY+DY+GIVAEDPVQL ISSSFFLGDA+ILFKS+KG+  G+N+VDNMFSGS KGI IV
Sbjct: 324 LNCYLDYSGIVAEDPVQLTISSSFFLGDAYILFKSVKGLAKGINIVDNMFSGSNKGIEIV 383

Query: 362 QLDQSKGAFTAVNQVVIDRNNVQGMTLRATVARGLTQGNGTSWTVDFNPVLLFPNLIRH 538
           QLDQSKG F  ++QVV+DRNNV GM L+ATVA+G  QGNGTSWT+DF+PVLLFPNLI H
Sbjct: 384 QLDQSKGPFKQIDQVVVDRNNVNGMNLKATVAKGSVQGNGTSWTIDFSPVLLFPNLIDH 442


>ref|XP_002335114.1| predicted protein [Populus trichocarpa]
           gi|224137804|ref|XP_002326444.1| predicted protein
           [Populus trichocarpa] gi|222832896|gb|EEE71373.1|
           predicted protein [Populus trichocarpa]
           gi|222833766|gb|EEE72243.1| predicted protein [Populus
           trichocarpa]
          Length = 496

 Score =  304 bits (778), Expect = 7e-81
 Identities = 147/179 (82%), Positives = 161/179 (89%)
 Frame = +2

Query: 2   INLMGNDNAVTDVVIFSGAIGVMVSGQANTLSGVHCYNKATGWGGTGIYLQLPGLTQTRI 181
           INLMGNDNAVTDVVIFS AIGVMVSGQANTLSGVHCYNKATG+GGTGIYL+LP LTQTRI
Sbjct: 271 INLMGNDNAVTDVVIFSAAIGVMVSGQANTLSGVHCYNKATGFGGTGIYLKLPSLTQTRI 330

Query: 182 VNCYMDYTGIVAEDPVQLHISSSFFLGDAFILFKSIKGIMNGVNVVDNMFSGSGKGINIV 361
           VNCY+DYTGIVAEDPVQL ISS FFLGDA+IL KSI G+  G+N+VDNMF+GS KGI IV
Sbjct: 331 VNCYLDYTGIVAEDPVQLTISSCFFLGDAYILLKSINGLAKGINIVDNMFAGSDKGIEIV 390

Query: 362 QLDQSKGAFTAVNQVVIDRNNVQGMTLRATVARGLTQGNGTSWTVDFNPVLLFPNLIRH 538
           QLDQSKG F  ++QVV+DRNNV+GM L+AT ARG  QGNGTSWTVDF+PVLLFPNLI H
Sbjct: 391 QLDQSKGPFKKIDQVVVDRNNVEGMNLKATAARGSAQGNGTSWTVDFSPVLLFPNLINH 449


>ref|XP_002337878.1| predicted protein [Populus trichocarpa] gi|222869958|gb|EEF07089.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  301 bits (771), Expect = 4e-80
 Identities = 146/179 (81%), Positives = 160/179 (89%)
 Frame = +2

Query: 2   INLMGNDNAVTDVVIFSGAIGVMVSGQANTLSGVHCYNKATGWGGTGIYLQLPGLTQTRI 181
           INLMGNDNAVTDVVIFS AIGVMVSGQANTLSGVHCYN ATG+GGTGIYL+LP LTQTRI
Sbjct: 111 INLMGNDNAVTDVVIFSAAIGVMVSGQANTLSGVHCYNLATGFGGTGIYLKLPSLTQTRI 170

Query: 182 VNCYMDYTGIVAEDPVQLHISSSFFLGDAFILFKSIKGIMNGVNVVDNMFSGSGKGINIV 361
           VNCY+DYTGIVAEDPVQL ISS FFLGDA+IL KSI G+  G+N+VDNMF+GS KGI IV
Sbjct: 171 VNCYLDYTGIVAEDPVQLTISSCFFLGDAYILLKSINGLAKGINIVDNMFAGSDKGIEIV 230

Query: 362 QLDQSKGAFTAVNQVVIDRNNVQGMTLRATVARGLTQGNGTSWTVDFNPVLLFPNLIRH 538
           QLDQSKG F  ++QVV+DRNNV+GM L+AT ARG  QGNGTSWTVDF+PVLLFPNLI H
Sbjct: 231 QLDQSKGPFKKIDQVVVDRNNVEGMNLKATAARGSAQGNGTSWTVDFSPVLLFPNLINH 289


>ref|XP_003631194.1| PREDICTED: polygalacturonase QRT3-like [Vitis vinifera]
          Length = 505

 Score =  297 bits (761), Expect = 6e-79
 Identities = 140/179 (78%), Positives = 160/179 (89%)
 Frame = +2

Query: 2   INLMGNDNAVTDVVIFSGAIGVMVSGQANTLSGVHCYNKATGWGGTGIYLQLPGLTQTRI 181
           IN++GNDNA+TDVVI+S A+GVMVSGQANTLSGVHCYNKATG+GGTGIYL+LP LTQTRI
Sbjct: 283 INIVGNDNAITDVVIYSAAVGVMVSGQANTLSGVHCYNKATGFGGTGIYLKLPSLTQTRI 342

Query: 182 VNCYMDYTGIVAEDPVQLHISSSFFLGDAFILFKSIKGIMNGVNVVDNMFSGSGKGINIV 361
           VNCY+DYTGIVAEDPVQLHISSSFFLGDA+I+FKSI G+  GV+VV NMFSGSGKG+ IV
Sbjct: 343 VNCYLDYTGIVAEDPVQLHISSSFFLGDAYIVFKSINGVARGVSVVGNMFSGSGKGVEIV 402

Query: 362 QLDQSKGAFTAVNQVVIDRNNVQGMTLRATVARGLTQGNGTSWTVDFNPVLLFPNLIRH 538
           QLDQ  G F  ++QVV+D NNV GM +RATV R  TQGNGTSW++DFNP+LLFPN IRH
Sbjct: 403 QLDQKNGPFKEIDQVVVDGNNVNGMKVRATVGRDSTQGNGTSWSIDFNPILLFPNHIRH 461


>emb|CAN67113.1| hypothetical protein VITISV_025312 [Vitis vinifera]
          Length = 448

 Score =  297 bits (761), Expect = 6e-79
 Identities = 140/179 (78%), Positives = 160/179 (89%)
 Frame = +2

Query: 2   INLMGNDNAVTDVVIFSGAIGVMVSGQANTLSGVHCYNKATGWGGTGIYLQLPGLTQTRI 181
           IN++GNDNA+TDVVI+S A+GVMVSGQANTLSGVHCYNKATG+GGTGIYL+LP LTQTRI
Sbjct: 226 INIVGNDNAITDVVIYSAAVGVMVSGQANTLSGVHCYNKATGFGGTGIYLKLPSLTQTRI 285

Query: 182 VNCYMDYTGIVAEDPVQLHISSSFFLGDAFILFKSIKGIMNGVNVVDNMFSGSGKGINIV 361
           VNCY+DYTGIVAEDPVQLHISSSFFLGDA+I+FKSI G+  GV+VV NMFSGSGKG+ IV
Sbjct: 286 VNCYLDYTGIVAEDPVQLHISSSFFLGDAYIVFKSINGVARGVSVVGNMFSGSGKGVEIV 345

Query: 362 QLDQSKGAFTAVNQVVIDRNNVQGMTLRATVARGLTQGNGTSWTVDFNPVLLFPNLIRH 538
           QLDQ  G F  ++QVV+D NNV GM +RATV R  TQGNGTSW++DFNP+LLFPN IRH
Sbjct: 346 QLDQKNGPFKEIDQVVVDGNNVNGMKVRATVGRDSTQGNGTSWSIDFNPILLFPNHIRH 404


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