BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032500
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucum...    70   2e-10
ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, put...    65   3e-10
ref|XP_002332533.1| predicted protein [Populus trichocarpa] gi|2...    67   5e-10
ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vini...    66   3e-09
ref|XP_002890726.1| hypothetical protein ARALYDRAFT_472944 [Arab...    64   4e-09

>ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucumis sativus]
           gi|449493187|ref|XP_004159216.1| PREDICTED: 5'
           exonuclease Apollo-like [Cucumis sativus]
          Length = 428

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 30/36 (83%), Positives = 32/36 (88%)
 Frame = -1

Query: 135 SQAYFLTHLHSDHTKGLSSNWNKGPLFCSSITAKIF 28
           SQ YFLTHLHSDHTKGLSS W+KGPLFCS +TAK F
Sbjct: 15  SQIYFLTHLHSDHTKGLSSQWSKGPLFCSRLTAKFF 50


>ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223538070|gb|EEF39682.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 427

 Score = 65.1 bits (157), Expect(2) = 3e-10
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = -1

Query: 135 SQAYFLTHLHSDHTKGLSSNWNKGPLFCSSITAKIF 28
           SQ YFLTHLHSDHTKGL+S W +GPLFCS +TA +F
Sbjct: 15  SQVYFLTHLHSDHTKGLTSAWARGPLFCSRLTANLF 50



 Score = 24.3 bits (51), Expect(2) = 3e-10
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -2

Query: 176 MEKGMISVNKWTE 138
           MEKG++SV++W E
Sbjct: 1   MEKGLVSVDQWKE 13


>ref|XP_002332533.1| predicted protein [Populus trichocarpa] gi|222832669|gb|EEE71146.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score = 66.6 bits (161), Expect(2) = 5e-10
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = -1

Query: 135 SQAYFLTHLHSDHTKGLSSNWNKGPLFCSSITAKI 31
           SQAYFLTHLH+DHT+GL+S W KGPLFCS +TAK+
Sbjct: 15  SQAYFLTHLHTDHTQGLTSKWGKGPLFCSKLTAKL 49



 Score = 21.9 bits (45), Expect(2) = 5e-10
 Identities = 8/13 (61%), Positives = 13/13 (100%)
 Frame = -2

Query: 176 MEKGMISVNKWTE 138
           MEKG+ISV+++T+
Sbjct: 1   MEKGLISVDRFTK 13


>ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vinifera]
           gi|296081253|emb|CBI17997.3| unnamed protein product
           [Vitis vinifera]
          Length = 435

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = -1

Query: 135 SQAYFLTHLHSDHTKGLSSNWNKGPLFCSSITAKIF 28
           SQ YFLTHLHSDHT+ LSS+W KGPLFCS +TAK+F
Sbjct: 15  SQVYFLTHLHSDHTQCLSSSWTKGPLFCSRLTAKLF 50


>ref|XP_002890726.1| hypothetical protein ARALYDRAFT_472944 [Arabidopsis lyrata subsp.
           lyrata] gi|297336568|gb|EFH66985.1| hypothetical protein
           ARALYDRAFT_472944 [Arabidopsis lyrata subsp. lyrata]
          Length = 422

 Score = 63.9 bits (154), Expect(2) = 4e-09
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = -1

Query: 135 SQAYFLTHLHSDHTKGLSSNWNKGPLFCSSITAKIF 28
           SQAYFLTH+ SDHT+GLS  W+KGPL+CS ITA +F
Sbjct: 15  SQAYFLTHMQSDHTRGLSGGWSKGPLYCSRITASLF 50



 Score = 21.6 bits (44), Expect(2) = 4e-09
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 176 MEKGMISVNKW 144
           ME G+ISV++W
Sbjct: 1   MESGLISVDRW 11