BLASTX nr result

ID: Coptis25_contig00032499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032499
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61239.1| hypothetical protein VITISV_003190 [Vitis vinifera]    85   1e-14
ref|XP_002510318.1| conserved hypothetical protein [Ricinus comm...    79   7e-13
ref|XP_002327086.1| predicted protein [Populus trichocarpa] gi|2...    73   5e-11
ref|XP_002301211.1| predicted protein [Populus trichocarpa] gi|2...    72   1e-10
ref|XP_003603714.1| hypothetical protein MTR_3g111460 [Medicago ...    69   1e-09

>emb|CAN61239.1| hypothetical protein VITISV_003190 [Vitis vinifera]
          Length = 99

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 45/101 (44%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
 Frame = -1

Query: 607 MAFTLSSKTNHSEKQNKINNNSVDQEEEPEIQPTITRHLYLKPTHSTETLEKDAVLRRIR 428
           M+F +S     S    KI N+  D  E+ +   T+T +L+LKP  S++TL+KD VLRRIR
Sbjct: 1   MSFLVSKPQPSSSDSEKITNS--DDREDSDTLXTVTSYLHLKPAZSSQTLDKDLVLRRIR 58

Query: 427 HCKRVNKVQNALQAMFGSPLSGGSTV---DKTWLEDAFSAP 314
           H KRVNKV+N  Q +  SP S   +    +K W++DAF+AP
Sbjct: 59  HRKRVNKVRNLFQTLVSSPFSTTDSFRVQEKKWVDDAFAAP 99


>ref|XP_002510318.1| conserved hypothetical protein [Ricinus communis]
           gi|223551019|gb|EEF52505.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 102

 Score = 79.3 bits (194), Expect = 7e-13
 Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 5/99 (5%)
 Frame = -1

Query: 595 LSSKTNH--SEKQNKINNNSVDQEEEPEIQ--PTITRHLYLKPTHSTETLEKDAVLRRIR 428
           L SKT    SE +N   NNS + +E+ E+     +T H++LKP HS++TL+KD VLRRIR
Sbjct: 4   LVSKTQPALSEAENNAANNSTEDQEDQEMLCGARVTTHVHLKPAHSSQTLDKDVVLRRIR 63

Query: 427 HCKRVNKVQNALQAMFGSPLSG-GSTVDKTWLEDAFSAP 314
             K  NKV++ LQ   G P S     V   W++DAF+AP
Sbjct: 64  QRKCANKVRSVLQGFLGFPTSSKPDKVSVRWVDDAFAAP 102


>ref|XP_002327086.1| predicted protein [Populus trichocarpa] gi|222835401|gb|EEE73836.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 6/101 (5%)
 Frame = -1

Query: 598 TLSSKTNHS-EKQNKINNNS---VDQEEEPEIQPTITRHLYLKPTHSTETLEKDAVLRRI 431
           +L+SKT  +  K  KI +N+      +E+PEI  ++T  +Y+KP HST+T +K+ VL+RI
Sbjct: 3   SLASKTQSTLSKSEKITSNTSTATKDQEDPEIFNSVTSFVYIKPVHSTKTRDKEEVLQRI 62

Query: 430 RHCKRVNKVQNALQAMFGSPLSGGS--TVDKTWLEDAFSAP 314
           R  K  NKV+ +LQ   G   S  S   V   W++DAF+AP
Sbjct: 63  RQRKGANKVRGSLQGFLGWLFSSKSENKVSAKWVDDAFAAP 103


>ref|XP_002301211.1| predicted protein [Populus trichocarpa] gi|222842937|gb|EEE80484.1|
           predicted protein [Populus trichocarpa]
          Length = 101

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 42/101 (41%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
 Frame = -1

Query: 607 MAFTLSSKTNHSEKQNKINNNSVDQEEEPEIQ-PTITRHLYLKPTHSTETLEKDAVLRRI 431
           M+  +S   +   K   INN++    ++ EI   ++T  +YLKP HSTET +K+ VL+RI
Sbjct: 1   MSSLVSKSQSSLSKPEDINNSTNTHTKDQEILINSVTSFIYLKPVHSTETRDKEEVLQRI 60

Query: 430 RHCKRVNKVQNALQAMFGSPLSGGS--TVDKTWLEDAFSAP 314
           R  KRVNKV++ LQ   G   S  S   V   W++DAF+AP
Sbjct: 61  RQRKRVNKVRDRLQGFLGWLFSSKSENEVSVKWVDDAFAAP 101


>ref|XP_003603714.1| hypothetical protein MTR_3g111460 [Medicago truncatula]
           gi|355492762|gb|AES73965.1| hypothetical protein
           MTR_3g111460 [Medicago truncatula]
          Length = 111

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 40/93 (43%), Positives = 59/93 (63%), Gaps = 7/93 (7%)
 Frame = -1

Query: 574 SEKQNKINNN-SVDQEEEPEIQPTITRHLYLKPTHSTETLEKDAVLRRIRHCKRVNKVQN 398
           ++KQ ++  N  V++EEE E    +T  L+LKP  + + L+K+ VLRRIRH KR+NKVQ 
Sbjct: 18  NDKQVEVGGNRGVEEEEEEESVFNVTSQLFLKPIENCKNLDKEVVLRRIRHRKRMNKVQA 77

Query: 397 ALQAMF-GSPLSG-----GSTVDKTWLEDAFSA 317
           A+ A+F GS  +       S   K W++DAF+A
Sbjct: 78  AVGAIFLGSSANNTGNGDASVQHKRWVDDAFAA 110


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