BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032490
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134638.1| PREDICTED: mitochondrial inner membrane prot...    75   6e-25
ref|XP_002283744.1| PREDICTED: mitochondrial inner membrane prot...    76   4e-24
ref|XP_002275543.1| PREDICTED: mitochondrial inner membrane prot...    70   9e-23
ref|XP_002451138.1| hypothetical protein SORBIDRAFT_05g024840 [S...    74   4e-22
ref|XP_002441341.1| hypothetical protein SORBIDRAFT_09g024760 [S...    74   5e-22

>ref|XP_004134638.1| PREDICTED: mitochondrial inner membrane protease subunit 1-like
           isoform 1 [Cucumis sativus]
           gi|449433708|ref|XP_004134639.1| PREDICTED:
           mitochondrial inner membrane protease subunit 1-like
           isoform 2 [Cucumis sativus]
           gi|449505931|ref|XP_004162607.1| PREDICTED:
           mitochondrial inner membrane protease subunit 1-like
           isoform 1 [Cucumis sativus]
           gi|449505935|ref|XP_004162608.1| PREDICTED:
           mitochondrial inner membrane protease subunit 1-like
           isoform 2 [Cucumis sativus]
          Length = 175

 Score = 74.7 bits (182), Expect(2) = 6e-25
 Identities = 30/49 (61%), Positives = 38/49 (77%)
 Frame = -2

Query: 190 QGHVWVTGDNVYDSRDSRTFGAVPSGLLYGRVFFRVWPFNAFGSLGSNK 44
           +GHVW+ GDN+YDSRDSR FGAVP  LL G++F+R+WP  +FG L   K
Sbjct: 121 KGHVWIEGDNIYDSRDSRNFGAVPYSLLQGKIFWRIWPPKSFGQLEKRK 169



 Score = 64.3 bits (155), Expect(2) = 6e-25
 Identities = 31/48 (64%), Positives = 37/48 (77%), Gaps = 3/48 (6%)
 Frame = -3

Query: 375 GDLVLVQRFSTKITR---GDIVLVRSPENPRKIVAKRVTGMEGDEITF 241
           GD VL +R ST+  R   GDIVLVRSPENPRK+V KR+ GMEGD +T+
Sbjct: 57  GDFVLAERLSTRFGRVGVGDIVLVRSPENPRKVVGKRLIGMEGDSVTY 104


>ref|XP_002283744.1| PREDICTED: mitochondrial inner membrane protease subunit 1 [Vitis
           vinifera] gi|302142795|emb|CBI20090.3| unnamed protein
           product [Vitis vinifera]
          Length = 167

 Score = 75.9 bits (185), Expect(2) = 4e-24
 Identities = 31/45 (68%), Positives = 36/45 (80%)
 Frame = -2

Query: 190 QGHVWVTGDNVYDSRDSRTFGAVPSGLLYGRVFFRVWPFNAFGSL 56
           +GHVW+ GDN+Y S DSR FG VP GL+ G+VFFRVWP N FGSL
Sbjct: 121 KGHVWIQGDNIYASHDSRNFGPVPYGLIQGKVFFRVWPLNGFGSL 165



 Score = 60.5 bits (145), Expect(2) = 4e-24
 Identities = 28/48 (58%), Positives = 37/48 (77%), Gaps = 3/48 (6%)
 Frame = -3

Query: 375 GDLVLVQRFST---KITRGDIVLVRSPENPRKIVAKRVTGMEGDEITF 241
           GD++LV+  +    K+  GD+VLVRSPENPRK V+KR+ GMEGD +TF
Sbjct: 57  GDVLLVENLTVRMGKVRPGDVVLVRSPENPRKTVSKRILGMEGDRVTF 104


>ref|XP_002275543.1| PREDICTED: mitochondrial inner membrane protease subunit 1-like
           isoform 1 [Vitis vinifera]
           gi|359483846|ref|XP_003633025.1| PREDICTED:
           mitochondrial inner membrane protease subunit 1-like
           isoform 2 [Vitis vinifera]
          Length = 169

 Score = 70.5 bits (171), Expect(2) = 9e-23
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = -2

Query: 190 QGHVWVTGDNVYDSRDSRTFGAVPSGLLYGRVFFRVWPFNAFGSL 56
           +GHVW+ GDN+Y S DSR FGAVP GLL G+VF+R+WP   FG L
Sbjct: 120 EGHVWIAGDNIYASTDSRNFGAVPYGLLQGKVFWRIWPPQGFGLL 164



 Score = 61.2 bits (147), Expect(2) = 9e-23
 Identities = 30/48 (62%), Positives = 35/48 (72%), Gaps = 3/48 (6%)
 Frame = -3

Query: 375 GDLVLVQRFST---KITRGDIVLVRSPENPRKIVAKRVTGMEGDEITF 241
           GDL+L  R S    K+  GDIVLVRSP+NPRKI+ KRV GM GD +TF
Sbjct: 56  GDLILADRLSVRFGKVGPGDIVLVRSPQNPRKIITKRVVGMGGDRVTF 103


>ref|XP_002451138.1| hypothetical protein SORBIDRAFT_05g024840 [Sorghum bicolor]
           gi|241936981|gb|EES10126.1| hypothetical protein
           SORBIDRAFT_05g024840 [Sorghum bicolor]
          Length = 173

 Score = 74.3 bits (181), Expect(2) = 4e-22
 Identities = 32/49 (65%), Positives = 37/49 (75%)
 Frame = -2

Query: 190 QGHVWVTGDNVYDSRDSRTFGAVPSGLLYGRVFFRVWPFNAFGSLGSNK 44
           QGHVWV GDN Y SRDSR FGAVP GL+ G++F RVWP   FG + SN+
Sbjct: 124 QGHVWVQGDNPYASRDSRQFGAVPYGLITGKIFCRVWPLEGFGPIDSNQ 172



 Score = 55.5 bits (132), Expect(2) = 4e-22
 Identities = 28/48 (58%), Positives = 35/48 (72%), Gaps = 3/48 (6%)
 Frame = -3

Query: 375 GDLVLVQRFSTKITR---GDIVLVRSPENPRKIVAKRVTGMEGDEITF 241
           GD+V V R S  + R   GD+VL+ SPE+PRK VAKRV GMEGD +T+
Sbjct: 60  GDVVAVDRVSATLGRVAPGDVVLMISPEDPRKSVAKRVVGMEGDSVTY 107


>ref|XP_002441341.1| hypothetical protein SORBIDRAFT_09g024760 [Sorghum bicolor]
           gi|241946626|gb|EES19771.1| hypothetical protein
           SORBIDRAFT_09g024760 [Sorghum bicolor]
          Length = 173

 Score = 74.3 bits (181), Expect(2) = 5e-22
 Identities = 32/49 (65%), Positives = 37/49 (75%)
 Frame = -2

Query: 190 QGHVWVTGDNVYDSRDSRTFGAVPSGLLYGRVFFRVWPFNAFGSLGSNK 44
           QGHVWV GDN Y SRDSR FGAVP GL+ G++F RVWP   FG + SN+
Sbjct: 124 QGHVWVQGDNPYASRDSRQFGAVPYGLITGKIFCRVWPLEGFGPIDSNQ 172



 Score = 55.1 bits (131), Expect(2) = 5e-22
 Identities = 26/48 (54%), Positives = 36/48 (75%), Gaps = 3/48 (6%)
 Frame = -3

Query: 375 GDLVLVQRFSTKITR---GDIVLVRSPENPRKIVAKRVTGMEGDEITF 241
           GD+V V R S ++ R   GD+VL+ SPE+PRK +AKRV GM+GD +T+
Sbjct: 60  GDVVAVDRVSVRLGRVAPGDVVLMVSPEDPRKSIAKRVVGMQGDSVTY 107