BLASTX nr result

ID: Coptis25_contig00032482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032482
         (897 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280034.2| PREDICTED: uncharacterized protein LOC100242...   267   2e-69
ref|XP_002308522.1| predicted protein [Populus trichocarpa] gi|2...   254   1e-65
dbj|BAK61878.1| YGGT family protein [Citrus unshiu]                   250   4e-64
ref|XP_004144214.1| PREDICTED: uncharacterized protein LOC101210...   239   5e-61
ref|NP_001240890.1| uncharacterized protein LOC100791676 [Glycin...   237   2e-60

>ref|XP_002280034.2| PREDICTED: uncharacterized protein LOC100242172 [Vitis vinifera]
           gi|296081720|emb|CBI20725.3| unnamed protein product
           [Vitis vinifera]
          Length = 252

 Score =  267 bits (683), Expect = 2e-69
 Identities = 147/253 (58%), Positives = 175/253 (69%), Gaps = 6/253 (2%)
 Frame = -2

Query: 893 SSSSSEDATQKPNIPS-HFVSNC-LLSSAFLXXXXXXXXXRHTIKPPN----PDSFRDLH 732
           +S S+E +T++    + ++ +NC LLSSAFL            +  P     PD  R  H
Sbjct: 2   ASPSTESSTERARCAAPNWAANCPLLSSAFLQTSFPPFLRPTKLTLPETSGVPDFIRQFH 61

Query: 731 KSISSVFDQCFRTVNSIADQNPLLQKLFSLPDNLRNVFQIRFRNHSTVNSLSMHNFAAIL 552
            S++S   +C   +   A QNP L +L SL  +     QI  R    +N LS  NFAAIL
Sbjct: 62  SSVASATQRCVALLQLFASQNPFLNRLSSLSAHFS---QIHCRKQRNLNPLSNQNFAAIL 118

Query: 551 PGDSVAGIVAANGVLNFLNIYNTLLIVRLVLTWFPNSPAAIVSPLSTICDPYLNIFRGII 372
           PGDSVAGIV ANG+LNFLNIYNTLLIVRLVLTWFPNSP AIVSPLST+CDPYLNIFRGII
Sbjct: 119 PGDSVAGIVVANGILNFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGII 178

Query: 371 PPLGGTLDLSPILAFLVLNAITSTASALPAEMPVEGPSPQRSSSAPHLFNLTMAQKQWMK 192
           PPLGGTLDLSPILAFLVLNA TSTA+ALPAE+P+ G   Q  SS   LF+LT  QK+WM+
Sbjct: 179 PPLGGTLDLSPILAFLVLNAFTSTAAALPAELPMAGVPQQIPSSHTRLFDLTTTQKKWMR 238

Query: 191 RVCGEKSKNSPSV 153
           R+CG +SK+S SV
Sbjct: 239 RLCGNRSKSSSSV 251


>ref|XP_002308522.1| predicted protein [Populus trichocarpa] gi|222854498|gb|EEE92045.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score =  254 bits (650), Expect = 1e-65
 Identities = 135/214 (63%), Positives = 165/214 (77%), Gaps = 7/214 (3%)
 Frame = -2

Query: 770 IKPP---NPDSFR-DLHKSISSVFDQCFRTVNSIADQNPLLQKLFSLPDNLRNVFQIR-- 609
           ++PP   NP  F  +LH SI+S  D+C R ++S A +NP+L+ + +  +      Q R  
Sbjct: 40  LRPPIKQNPSIFMGELHNSITSAADKCLRFLHSFASRNPILKNIVTDFNQHMTRIQCRRE 99

Query: 608 FRNHSTVNSLSMHNFAAILPGDSVAGIVAANGVLNFLNIYNTLLIVRLVLTWFPNSPAAI 429
           +   +  N LS HNFAA+LPGDSVAG+V ANG++NFLNIYNTLL+VRLVLTWFPNSP AI
Sbjct: 100 YCRRNMNNYLSNHNFAAVLPGDSVAGLVVANGIINFLNIYNTLLVVRLVLTWFPNSPPAI 159

Query: 428 VSPLSTICDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAITSTASALPAEMPVEGPSPQR 249
           VSPLST+CDPYLNIFRGIIPPLGGTLDLSPILAFLVLNA TSTA+ALPAE+P  G SP R
Sbjct: 160 VSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAFTSTATALPAELPENGASP-R 218

Query: 248 SSSAPHLF-NLTMAQKQWMKRVCGEKSKNSPSVD 150
           S S+P LF +LT AQK+WM+R+ G KS++SP  D
Sbjct: 219 SRSSPTLFTHLTTAQKKWMRRLNGNKSRSSPGAD 252


>dbj|BAK61878.1| YGGT family protein [Citrus unshiu]
          Length = 254

 Score =  250 bits (638), Expect = 4e-64
 Identities = 136/253 (53%), Positives = 176/253 (69%), Gaps = 10/253 (3%)
 Frame = -2

Query: 896 SSSSSSEDATQKPNIPSHFVSNCLLSSA------FLXXXXXXXXXRHTIKPPNPDSFRDL 735
           S+ SS+E+A  +       VS+C+L S+      F+         R+T+   +P+  RDL
Sbjct: 3   SNESSAENAECRDK---KIVSSCMLLSSAFSQTPFVQPFFKPLLARNTVPVASPNIIRDL 59

Query: 734 HKSISSVFDQCFRTVNSIADQNPLLQKLFSLPDNLRNV-FQIRFRNHSTVNSLSMHNFAA 558
             S+ S+ D+  + +NS+A  NPL+QK  SL     +   Q+R RN+  +N L  HNFAA
Sbjct: 60  QNSVISITDKVSKFLNSLASHNPLIQKFLSLSAEFHSFCHQVRCRNNVKMNPLGNHNFAA 119

Query: 557 ILPGDSVAGIVAANGVLNFLNIYNTLLIVRLVLTWFPNSPAAIVSPLSTICDPYLNIFRG 378
           +LPGDSV G+V ANG+++FLNIYNTLLIVRLVLTWFPNSP AIVSPLST+CDPYLNIFRG
Sbjct: 120 VLPGDSVGGLVVANGIMSFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRG 179

Query: 377 IIPPLGGTLDLSPILAFLVLNAITSTASALPAEMPVEGPSPQRS---SSAPHLFNLTMAQ 207
           IIPPLGGTLDLSPILAFLVLNAITS A+ALP E+PV G + Q++   +S P   NLT  Q
Sbjct: 180 IIPPLGGTLDLSPILAFLVLNAITSAAAALPCELPVTGLASQQAASPASIPVSTNLTTPQ 239

Query: 206 KQWMKRVCGEKSK 168
           K+W++R+   + K
Sbjct: 240 KKWIRRLSNNRGK 252


>ref|XP_004144214.1| PREDICTED: uncharacterized protein LOC101210772 [Cucumis sativus]
           gi|449489274|ref|XP_004158265.1| PREDICTED:
           uncharacterized protein LOC101228772 [Cucumis sativus]
          Length = 253

 Score =  239 bits (611), Expect = 5e-61
 Identities = 126/231 (54%), Positives = 155/231 (67%), Gaps = 3/231 (1%)
 Frame = -2

Query: 845 HFVSNCL--LSSAFLXXXXXXXXXRHTIKPPNPDSFRDLHKSISSVFDQCFRTVNSIADQ 672
           +F  NC+   S AF          R     P  +  R LH+S +S  + C R  +S+A +
Sbjct: 19  NFFPNCISSFSPAFSQTPSGPSRRRQLEFAPPCNFLRHLHESFASTTESCIRLFHSLASE 78

Query: 671 NPLLQKLFSLPDNLRNV-FQIRFRNHSTVNSLSMHNFAAILPGDSVAGIVAANGVLNFLN 495
           NP L KL SLP       +QI   N     +LS HNFAA+LPGDS+AG+V ANG+ NFL+
Sbjct: 79  NPFLHKLLSLPSEFHRFRYQIHGMNSMNFRALSSHNFAAVLPGDSMAGLVVANGIQNFLS 138

Query: 494 IYNTLLIVRLVLTWFPNSPAAIVSPLSTICDPYLNIFRGIIPPLGGTLDLSPILAFLVLN 315
           +YNTLL+VRLVLTWFPN+P AIVSPLST+CDPYLNIFRGIIPPLGGTLDLSPILAFLVLN
Sbjct: 139 LYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLN 198

Query: 314 AITSTASALPAEMPVEGPSPQRSSSAPHLFNLTMAQKQWMKRVCGEKSKNS 162
           A TSTA+ALPAE+P    S    +      +LT +QK+WMKR+ G +  N+
Sbjct: 199 AFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKRLQGSEKNNA 249


>ref|NP_001240890.1| uncharacterized protein LOC100791676 [Glycine max]
           gi|255638926|gb|ACU19765.1| unknown [Glycine max]
          Length = 234

 Score =  237 bits (605), Expect = 2e-60
 Identities = 121/192 (63%), Positives = 144/192 (75%)
 Frame = -2

Query: 737 LHKSISSVFDQCFRTVNSIADQNPLLQKLFSLPDNLRNVFQIRFRNHSTVNSLSMHNFAA 558
           LH S ++  D  FR ++S+A  N  L K+ SLP     +  ++      V  +S HNFAA
Sbjct: 39  LHTSFTTAADNFFRFLHSLASHNSFLNKILSLPSEFHTLC-VQIGKQRNVRLVSGHNFAA 97

Query: 557 ILPGDSVAGIVAANGVLNFLNIYNTLLIVRLVLTWFPNSPAAIVSPLSTICDPYLNIFRG 378
           +LPGDSVAG+V ANGVLNFLNIYNTLLIVRLVLTWFPN+P +IVSPLSTICDPYLNIFRG
Sbjct: 98  VLPGDSVAGLVVANGVLNFLNIYNTLLIVRLVLTWFPNTPPSIVSPLSTICDPYLNIFRG 157

Query: 377 IIPPLGGTLDLSPILAFLVLNAITSTASALPAEMPVEGPSPQRSSSAPHLFNLTMAQKQW 198
           +IPPLGGTLDLSPILAFLVLNA TSTASALPAE+PV   S Q  ++  H  NLT +QK+W
Sbjct: 158 LIPPLGGTLDLSPILAFLVLNAFTSTASALPAELPVTEQSKQGLAAPLHSTNLTTSQKKW 217

Query: 197 MKRVCGEKSKNS 162
           + R  G +S+ S
Sbjct: 218 LTRFQGNRSRTS 229


Top