BLASTX nr result

ID: Coptis25_contig00032479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032479
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520834.1| oligopeptide transporter, putative [Ricinus ...   145   3e-33
ref|XP_002325913.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32
ref|XP_002278980.1| PREDICTED: probable peptide/nitrate transpor...   136   2e-30
ref|XP_003538496.1| PREDICTED: probable peptide/nitrate transpor...   135   3e-30
ref|XP_003601036.1| Peptide transporter PTR3-A [Medicago truncat...   132   2e-29

>ref|XP_002520834.1| oligopeptide transporter, putative [Ricinus communis]
           gi|223539965|gb|EEF41543.1| oligopeptide transporter,
           putative [Ricinus communis]
          Length = 585

 Score =  145 bits (367), Expect = 3e-33
 Identities = 67/98 (68%), Positives = 82/98 (83%)
 Frame = +3

Query: 3   TSGIGVGNFLNSFLVTLVDKITGRGGRKSWIGNNLNNSHLDFYYGFLIFISVINLCVYLW 182
           TSGIG GNFLNSFLVT+VDKITGRGG KSWIGNNLN+ HLD+YYGFL+ IS +NL  +LW
Sbjct: 491 TSGIGAGNFLNSFLVTMVDKITGRGGGKSWIGNNLNDCHLDYYYGFLLVISTLNLGAFLW 550

Query: 183 VSGKYSYKKETIEIDGRKGSCIQMDGKAVDTTPLGLQV 296
            S ++ YKKETI+++     C+QM+GK +DT+PLGLQV
Sbjct: 551 ASSRFIYKKETIKVN---EGCVQMEGKTLDTSPLGLQV 585


>ref|XP_002325913.1| predicted protein [Populus trichocarpa] gi|222862788|gb|EEF00295.1|
           predicted protein [Populus trichocarpa]
          Length = 591

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/98 (69%), Positives = 81/98 (82%)
 Frame = +3

Query: 3   TSGIGVGNFLNSFLVTLVDKITGRGGRKSWIGNNLNNSHLDFYYGFLIFISVINLCVYLW 182
           TSGIGVGNFLNSFLVT+V KITG GG KSWIGNNLN+SHLD+YYGFL+ IS +NL V+LW
Sbjct: 496 TSGIGVGNFLNSFLVTMVAKITGTGGGKSWIGNNLNDSHLDYYYGFLLVISALNLGVFLW 555

Query: 183 VSGKYSYKKETIEIDGRKGSCIQMDGKAVDTTPLGLQV 296
            S +Y YKKET++       CI++DGK +DT+PLGLQV
Sbjct: 556 ASSRYVYKKETLQ--ALNEDCIRIDGKTMDTSPLGLQV 591


>ref|XP_002278980.1| PREDICTED: probable peptide/nitrate transporter At2g40460 [Vitis
           vinifera] gi|297736523|emb|CBI25394.3| unnamed protein
           product [Vitis vinifera]
          Length = 585

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/100 (66%), Positives = 81/100 (81%), Gaps = 2/100 (2%)
 Frame = +3

Query: 3   TSGIGVGNFLNSFLVTLVDKITGRGGRKSWIGNNLNNSHLDFYYGFLIFISVINLCVYLW 182
           TSGIGVGNFLNSFLVT+VDKIT RGG KSWIG NLN++HLD+YYGFL+ IS +NL  +LW
Sbjct: 491 TSGIGVGNFLNSFLVTVVDKITRRGGGKSWIGKNLNDTHLDYYYGFLLVISALNLGAFLW 550

Query: 183 VSGKYSYKKETIE--IDGRKGSCIQMDGKAVDTTPLGLQV 296
            SGKY YK+E IE  +DG     +Q++ KA+DT+PL +QV
Sbjct: 551 ASGKYIYKRENIEVYVDG-----VQVESKALDTSPLAIQV 585


>ref|XP_003538496.1| PREDICTED: probable peptide/nitrate transporter At2g40460-like
           [Glycine max]
          Length = 587

 Score =  135 bits (340), Expect = 3e-30
 Identities = 62/98 (63%), Positives = 80/98 (81%)
 Frame = +3

Query: 3   TSGIGVGNFLNSFLVTLVDKITGRGGRKSWIGNNLNNSHLDFYYGFLIFISVINLCVYLW 182
           TSGIG GNFLNSFLVT+VDKITGRG +KSWIG+NLN+ HLD+YYGFL+ +S +N+ V+LW
Sbjct: 492 TSGIGFGNFLNSFLVTMVDKITGRGDKKSWIGDNLNDCHLDYYYGFLLVMSSVNMVVFLW 551

Query: 183 VSGKYSYKKETIEIDGRKGSCIQMDGKAVDTTPLGLQV 296
           VS +Y YK+E+I +  ++G C+QM+GK      LGLQV
Sbjct: 552 VSSRYIYKRESIRV--KEGLCVQMEGKPTLDASLGLQV 587


>ref|XP_003601036.1| Peptide transporter PTR3-A [Medicago truncatula]
           gi|355490084|gb|AES71287.1| Peptide transporter PTR3-A
           [Medicago truncatula]
          Length = 623

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/98 (63%), Positives = 78/98 (79%)
 Frame = +3

Query: 3   TSGIGVGNFLNSFLVTLVDKITGRGGRKSWIGNNLNNSHLDFYYGFLIFISVINLCVYLW 182
           TSGIGVGNFLNSFLVT+ DKITGRG RKSWI +NLN+SHLD+YYGFL+ +S +NL V+LW
Sbjct: 494 TSGIGVGNFLNSFLVTMTDKITGRGDRKSWIADNLNDSHLDYYYGFLLILSSVNLLVFLW 553

Query: 183 VSGKYSYKKETIEIDGRKGSCIQMDGKAVDTTPLGLQV 296
           VS +Y YKKE+  I  ++  C+QM+G +     LGLQ+
Sbjct: 554 VSSRYIYKKESSRI--KEALCVQMEGNSTLDASLGLQL 589


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