BLASTX nr result
ID: Coptis25_contig00032464
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00032464 (619 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK93560.1| cytochrome c oxidase subunit 2, partial (mitochon... 384 e-105 emb|CBJ20691.1| cytochrome c oxidase subunit 2 [Beta vulgaris su... 384 e-105 ref|YP_003875498.1| cytochrome c oxidase subunit 2 [Silene latif... 384 e-105 ref|NP_064061.2| cox2 gene product (mitochondrion) [Beta vulgari... 384 e-105 gb|AFK93558.1| cytochrome c oxidase subunit 2, partial (mitochon... 382 e-104 >gb|AFK93560.1| cytochrome c oxidase subunit 2, partial (mitochondrion) [Platanus x acerifolia] Length = 228 Score = 384 bits (985), Expect = e-105 Identities = 188/205 (91%), Positives = 190/205 (92%) Frame = -3 Query: 617 DLHHDXXXXXXXXXXXXLWMLVRALWHFHYKTNPIPQRIVHGTTIEIIWTIFPSIILMFI 438 DLHHD LWMLVRALWHFHY+TNPIPQRIVHGTTIEI+WTIFPSIILMFI Sbjct: 18 DLHHDIFFFLIQILVFVLWMLVRALWHFHYQTNPIPQRIVHGTTIEILWTIFPSIILMFI 77 Query: 437 AIPSFALLYSMDEVVVYPAITIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLEL 258 AIPSFALLYSMDEVVV PAITIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLEL Sbjct: 78 AIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLEL 137 Query: 257 GQLRLLEVDNRVVVPANTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQTSILVQREG 78 GQLRLLEVDNRVVVPA HLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQTSILVQREG Sbjct: 138 GQLRLLEVDNRVVVPAKIHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQTSILVQREG 197 Query: 77 VYYGQCSEICGTNHAFMPIVVEAVS 3 VYYGQCSEICGTNHAFMPIVVEAVS Sbjct: 198 VYYGQCSEICGTNHAFMPIVVEAVS 222 >emb|CBJ20691.1| cytochrome c oxidase subunit 2 [Beta vulgaris subsp. maritima] Length = 252 Score = 384 bits (985), Expect = e-105 Identities = 188/205 (91%), Positives = 190/205 (92%) Frame = -3 Query: 617 DLHHDXXXXXXXXXXXXLWMLVRALWHFHYKTNPIPQRIVHGTTIEIIWTIFPSIILMFI 438 DLHHD LW+LVRALWHFHYK NPIPQRIVHGTTIEIIWTIFPSIILMFI Sbjct: 37 DLHHDIFFFLILILVFVLWILVRALWHFHYKKNPIPQRIVHGTTIEIIWTIFPSIILMFI 96 Query: 437 AIPSFALLYSMDEVVVYPAITIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLEL 258 AIPSFALLYSMDEVVV PAITIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLEL Sbjct: 97 AIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLEL 156 Query: 257 GQLRLLEVDNRVVVPANTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQTSILVQREG 78 GQLRLLEVDNRVVVPA TH+RIIVTSADVLHSWAVPSLGVKCDAVPGRLNQTSILVQREG Sbjct: 157 GQLRLLEVDNRVVVPAKTHIRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQTSILVQREG 216 Query: 77 VYYGQCSEICGTNHAFMPIVVEAVS 3 VYYGQCSEICGTNHAFMPIVVEAVS Sbjct: 217 VYYGQCSEICGTNHAFMPIVVEAVS 241 >ref|YP_003875498.1| cytochrome c oxidase subunit 2 [Silene latifolia] gi|296040639|gb|ADG85287.1| cytochrome c oxidase subunit 2 [Silene latifolia] gi|301338025|gb|ADK73317.1| cytochrome c oxidase subunit 2 [Silene latifolia] Length = 259 Score = 384 bits (985), Expect = e-105 Identities = 188/205 (91%), Positives = 190/205 (92%) Frame = -3 Query: 617 DLHHDXXXXXXXXXXXXLWMLVRALWHFHYKTNPIPQRIVHGTTIEIIWTIFPSIILMFI 438 DLHHD LW+LVRALWHFHYK NPIPQRIVHGTTIEIIWTIFPSIILMFI Sbjct: 36 DLHHDIFFFLILILVFVLWILVRALWHFHYKKNPIPQRIVHGTTIEIIWTIFPSIILMFI 95 Query: 437 AIPSFALLYSMDEVVVYPAITIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLEL 258 AIPSFALLYSMDEVVV PAITIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLEL Sbjct: 96 AIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLEL 155 Query: 257 GQLRLLEVDNRVVVPANTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQTSILVQREG 78 GQLRLLEVDNRVVVPA TH+RIIVTSADVLHSWAVPSLGVKCDAVPGRLNQTSILVQREG Sbjct: 156 GQLRLLEVDNRVVVPAKTHIRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQTSILVQREG 215 Query: 77 VYYGQCSEICGTNHAFMPIVVEAVS 3 VYYGQCSEICGTNHAFMPIVVEAVS Sbjct: 216 VYYGQCSEICGTNHAFMPIVVEAVS 240 >ref|NP_064061.2| cox2 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris] gi|323435041|ref|YP_004222256.1| cytochrome c oxidase subunit 2 [Beta vulgaris subsp. maritima] gi|346683134|ref|YP_004842063.1| cytochrome c oxidase subunit 2 [Beta macrocarpa] gi|87248025|gb|ABD36067.1| cytochrome oxidase subunit 2 [Beta vulgaris subsp. vulgaris] gi|148491430|dbj|BAA99453.2| cytochrome c oxidase subunit 2 [Beta vulgaris subsp. vulgaris] gi|317905694|emb|CBJ14086.1| cytochrome c oxidase subunit 2 [Beta vulgaris subsp. maritima] gi|319439774|emb|CBJ17495.1| cytochrome c oxidase subunit 2 [Beta vulgaris subsp. maritima] gi|345500052|emb|CBX24868.1| cytochrome c oxidase subunit 2 [Beta macrocarpa] gi|384939216|emb|CBL52062.2| cytochrome c oxidase subunit 2 (mitochondrion) [Beta vulgaris subsp. maritima] Length = 260 Score = 384 bits (985), Expect = e-105 Identities = 188/205 (91%), Positives = 190/205 (92%) Frame = -3 Query: 617 DLHHDXXXXXXXXXXXXLWMLVRALWHFHYKTNPIPQRIVHGTTIEIIWTIFPSIILMFI 438 DLHHD LW+LVRALWHFHYK NPIPQRIVHGTTIEIIWTIFPSIILMFI Sbjct: 37 DLHHDIFFFLILILVFVLWILVRALWHFHYKKNPIPQRIVHGTTIEIIWTIFPSIILMFI 96 Query: 437 AIPSFALLYSMDEVVVYPAITIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLEL 258 AIPSFALLYSMDEVVV PAITIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLEL Sbjct: 97 AIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLEL 156 Query: 257 GQLRLLEVDNRVVVPANTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQTSILVQREG 78 GQLRLLEVDNRVVVPA TH+RIIVTSADVLHSWAVPSLGVKCDAVPGRLNQTSILVQREG Sbjct: 157 GQLRLLEVDNRVVVPAKTHIRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQTSILVQREG 216 Query: 77 VYYGQCSEICGTNHAFMPIVVEAVS 3 VYYGQCSEICGTNHAFMPIVVEAVS Sbjct: 217 VYYGQCSEICGTNHAFMPIVVEAVS 241 >gb|AFK93558.1| cytochrome c oxidase subunit 2, partial (mitochondrion) [Buxus microphylla] Length = 228 Score = 382 bits (980), Expect = e-104 Identities = 187/205 (91%), Positives = 190/205 (92%) Frame = -3 Query: 617 DLHHDXXXXXXXXXXXXLWMLVRALWHFHYKTNPIPQRIVHGTTIEIIWTIFPSIILMFI 438 DLHHD LWMLVRALWHFHY+ +PIPQRIVHGTTIEI+WTIFPSIILMFI Sbjct: 18 DLHHDIFFFLILILVFVLWMLVRALWHFHYQKHPIPQRIVHGTTIEILWTIFPSIILMFI 77 Query: 437 AIPSFALLYSMDEVVVYPAITIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLEL 258 AIPSFALLYSMDEVVV PAITIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLEL Sbjct: 78 AIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLEL 137 Query: 257 GQLRLLEVDNRVVVPANTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQTSILVQREG 78 GQLRLLEVDNRVVVPA THLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQTSILVQREG Sbjct: 138 GQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQTSILVQREG 197 Query: 77 VYYGQCSEICGTNHAFMPIVVEAVS 3 VYYGQCSEICGTNHAFMPIVVEAVS Sbjct: 198 VYYGQCSEICGTNHAFMPIVVEAVS 222