BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032440
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea m...    61   1e-07
ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containi...    60   1e-07
ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containi...    59   3e-07
ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [S...    59   5e-07
ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containi...    58   9e-07

>tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/81 (39%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
 Frame = -3

Query: 414 IEFGIKLFDQMPERSIVSWNSIITGWCGPGV-WKAIVYFSRMIFMYEERPDSFTMRTLLK 238
           +E  + +F+ M ERSIVSWN+II G+   G+   A+ +FSRM+      PD+FT+ ++L 
Sbjct: 429 MELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLS 488

Query: 237 AIMHLLILFGGGREIHGYMVR 175
           A  +L +L   G+++H Y++R
Sbjct: 489 ACANLRML-KMGKQMHSYILR 508


>ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 802

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/81 (37%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
 Frame = -3

Query: 414 IEFGIKLFDQMPERSIVSWNSIITGWCGPGV-WKAIVYFSRMIFMYEERPDSFTMRTLLK 238
           ++  + LF+ MP+R+IVSWN++I G+   G+  KA+ +FSRM+      PD FT+ ++L 
Sbjct: 244 MDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLS 303

Query: 237 AIMHLLILFGGGREIHGYMVR 175
           A  +L ++   G+++H Y++R
Sbjct: 304 ACANLGMV-SIGKQVHAYILR 323


>ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
 Frame = -3

Query: 411 EFGIKLFDQMPERSIVSWNSIITGWCGPGV-WKAIVYFSRMIFMYEERPDSFTMRTLLKA 235
           E     F++MP+R IVSWNS+I+G+   G   +A+V FS+M+     +PD+FT+ ++L A
Sbjct: 225 ELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSA 284

Query: 234 IMHLLILFGGGREIHGYMVR 175
             +L  L   G++IH Y++R
Sbjct: 285 CANLEKL-NIGKQIHAYILR 303


>ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
           gi|241917662|gb|EER90806.1| hypothetical protein
           SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/81 (38%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
 Frame = -3

Query: 414 IEFGIKLFDQMPERSIVSWNSIITGWCGPGV-WKAIVYFSRMIFMYEERPDSFTMRTLLK 238
           ++  + +F+ M ERSIVSWN+II G+   G+   A+ +FSRM+      PD FT+ ++L 
Sbjct: 245 MDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLS 304

Query: 237 AIMHLLILFGGGREIHGYMVR 175
           A  +L +L   G+++H Y++R
Sbjct: 305 ACANLRML-KMGKQMHSYILR 324


>ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/80 (40%), Positives = 47/80 (58%)
 Frame = -3

Query: 414 IEFGIKLFDQMPERSIVSWNSIITGWCGPGVWKAIVYFSRMIFMYEERPDSFTMRTLLKA 235
           I+   K+FD+MPER +VSWN+II G+   G  K  +     +    +RPDS T+ T+L A
Sbjct: 198 IDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPA 257

Query: 234 IMHLLILFGGGREIHGYMVR 175
              + +L   G+ IHGY +R
Sbjct: 258 AADVGLLM-VGKSIHGYAIR 276