BLASTX nr result
ID: Coptis25_contig00032440
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00032440 (419 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea m... 61 1e-07 ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containi... 60 1e-07 ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containi... 59 3e-07 ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [S... 59 5e-07 ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containi... 58 9e-07 >tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays] Length = 987 Score = 60.8 bits (146), Expect = 1e-07 Identities = 32/81 (39%), Positives = 53/81 (65%), Gaps = 1/81 (1%) Frame = -3 Query: 414 IEFGIKLFDQMPERSIVSWNSIITGWCGPGV-WKAIVYFSRMIFMYEERPDSFTMRTLLK 238 +E + +F+ M ERSIVSWN+II G+ G+ A+ +FSRM+ PD+FT+ ++L Sbjct: 429 MELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLS 488 Query: 237 AIMHLLILFGGGREIHGYMVR 175 A +L +L G+++H Y++R Sbjct: 489 ACANLRML-KMGKQMHSYILR 508 >ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like [Brachypodium distachyon] Length = 802 Score = 60.5 bits (145), Expect = 1e-07 Identities = 30/81 (37%), Positives = 54/81 (66%), Gaps = 1/81 (1%) Frame = -3 Query: 414 IEFGIKLFDQMPERSIVSWNSIITGWCGPGV-WKAIVYFSRMIFMYEERPDSFTMRTLLK 238 ++ + LF+ MP+R+IVSWN++I G+ G+ KA+ +FSRM+ PD FT+ ++L Sbjct: 244 MDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLS 303 Query: 237 AIMHLLILFGGGREIHGYMVR 175 A +L ++ G+++H Y++R Sbjct: 304 ACANLGMV-SIGKQVHAYILR 323 >ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like [Cucumis sativus] Length = 782 Score = 59.3 bits (142), Expect = 3e-07 Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 1/80 (1%) Frame = -3 Query: 411 EFGIKLFDQMPERSIVSWNSIITGWCGPGV-WKAIVYFSRMIFMYEERPDSFTMRTLLKA 235 E F++MP+R IVSWNS+I+G+ G +A+V FS+M+ +PD+FT+ ++L A Sbjct: 225 ELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSA 284 Query: 234 IMHLLILFGGGREIHGYMVR 175 +L L G++IH Y++R Sbjct: 285 CANLEKL-NIGKQIHAYILR 303 >ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor] gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor] Length = 803 Score = 58.5 bits (140), Expect = 5e-07 Identities = 31/81 (38%), Positives = 52/81 (64%), Gaps = 1/81 (1%) Frame = -3 Query: 414 IEFGIKLFDQMPERSIVSWNSIITGWCGPGV-WKAIVYFSRMIFMYEERPDSFTMRTLLK 238 ++ + +F+ M ERSIVSWN+II G+ G+ A+ +FSRM+ PD FT+ ++L Sbjct: 245 MDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLS 304 Query: 237 AIMHLLILFGGGREIHGYMVR 175 A +L +L G+++H Y++R Sbjct: 305 ACANLRML-KMGKQMHSYILR 324 >ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like [Cucumis sativus] Length = 821 Score = 57.8 bits (138), Expect = 9e-07 Identities = 32/80 (40%), Positives = 47/80 (58%) Frame = -3 Query: 414 IEFGIKLFDQMPERSIVSWNSIITGWCGPGVWKAIVYFSRMIFMYEERPDSFTMRTLLKA 235 I+ K+FD+MPER +VSWN+II G+ G K + + +RPDS T+ T+L A Sbjct: 198 IDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPA 257 Query: 234 IMHLLILFGGGREIHGYMVR 175 + +L G+ IHGY +R Sbjct: 258 AADVGLLM-VGKSIHGYAIR 276