BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032438
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306233.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25
ref|XP_002328164.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25
ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
emb|CAN79022.1| hypothetical protein VITISV_022893 [Vitis vinifera]   119   3e-25
ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24

>ref|XP_002306233.1| predicted protein [Populus trichocarpa] gi|222849197|gb|EEE86744.1|
           predicted protein [Populus trichocarpa]
          Length = 557

 Score =  119 bits (299), Expect = 2e-25
 Identities = 61/114 (53%), Positives = 82/114 (71%)
 Frame = +3

Query: 96  ESKFMYELGTCSKHNNLQGALSLYQTALSQNLRLNHNHYNTLIYLCSNSLINTTNQHHHD 275
           ES+F Y L   SK  +L  A+SLY TA+SQN RLN +++NTL+YLCS SL + + +    
Sbjct: 17  ESQFSYNLNFYSKSKDLHSAISLYDTAISQNTRLNQHNFNTLLYLCSISLNDPSTKD--- 73

Query: 276 LLLLTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFQLVKGMGKY 437
              L+++ GF +F+ M+SN I P EA+IT+VARLAAAKGDGD+AF LVK +G Y
Sbjct: 74  ---LSLQYGFRVFDHMVSNGIKPNEASITAVARLAAAKGDGDYAFDLVKNIGVY 124


>ref|XP_002328164.1| predicted protein [Populus trichocarpa] gi|222837679|gb|EEE76044.1|
           predicted protein [Populus trichocarpa]
          Length = 557

 Score =  119 bits (299), Expect = 2e-25
 Identities = 61/114 (53%), Positives = 82/114 (71%)
 Frame = +3

Query: 96  ESKFMYELGTCSKHNNLQGALSLYQTALSQNLRLNHNHYNTLIYLCSNSLINTTNQHHHD 275
           ES+F Y L   SK  +L  A+SLY TA+SQN RLN +++NTL+YLCS SL + + +    
Sbjct: 17  ESQFSYNLNFYSKSKDLHSAISLYDTAISQNTRLNQHNFNTLLYLCSISLNDPSTKD--- 73

Query: 276 LLLLTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFQLVKGMGKY 437
              L+++ GF +F+ M+SN I P EA+IT+VARLAAAKGDGD+AF LVK +G Y
Sbjct: 74  ---LSLQYGFRVFDHMVSNGIKPNEASITAVARLAAAKGDGDYAFDLVKNIGVY 124


>ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 551

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/116 (48%), Positives = 85/116 (73%)
 Frame = +3

Query: 96  ESKFMYELGTCSKHNNLQGALSLYQTALSQNLRLNHNHYNTLIYLCSNSLINTTNQHHHD 275
           E KF ++L TCSK  +L GA++L+++A+SQN RL H H+N L+YLC+ S+   +++    
Sbjct: 12  EGKFRFDLDTCSKRRDLSGAVALFESAVSQNFRLIHYHFNALLYLCTISIDEPSSK---- 67

Query: 276 LLLLTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFQLVKGMGKYKI 443
              L ++ GF IF+ M+++ + P EATIT+VARLAAAK DGD AF++V+ MGKY++
Sbjct: 68  --ALALDYGFRIFDHMVNSGVTPNEATITAVARLAAAKSDGDLAFEVVRTMGKYEL 121


>emb|CAN79022.1| hypothetical protein VITISV_022893 [Vitis vinifera]
          Length = 509

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/116 (48%), Positives = 85/116 (73%)
 Frame = +3

Query: 96  ESKFMYELGTCSKHNNLQGALSLYQTALSQNLRLNHNHYNTLIYLCSNSLINTTNQHHHD 275
           E KF ++L TCSK  +L GA++L+++A+SQN RL H H+N L+YLC+ S+   +++    
Sbjct: 12  EGKFRFDLDTCSKRRDLSGAVALFESAVSQNFRLIHYHFNALLYLCTISIDEPSSK---- 67

Query: 276 LLLLTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFQLVKGMGKYKI 443
              L ++ GF IF+ M+++ + P EATIT+VARLAAAK DGD AF++V+ MGKY++
Sbjct: 68  --ALALDYGFRIFDHMVNSGVTPNEATITAVARLAAAKSDGDLAFEVVRTMGKYEL 121


>ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/113 (51%), Positives = 79/113 (69%)
 Frame = +3

Query: 96  ESKFMYELGTCSKHNNLQGALSLYQTALSQNLRLNHNHYNTLIYLCSNSLINTTNQHHHD 275
           E+KF +EL +CSK  +L+GA+SLY  A+S N RLN +H+N L+YLCSNS+ + +      
Sbjct: 16  ETKFQFELNSCSKAKDLRGAISLYDDAVSNNTRLNQHHFNALLYLCSNSVADPS------ 69

Query: 276 LLLLTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFQLVKGMGK 434
           L    ++ GF  F  M +  + P EAT+T+VARLAAAKGD D+AF+LVK MGK
Sbjct: 70  LKPTALDYGFRAFRHMSALAVLPNEATVTAVARLAAAKGDADYAFELVKSMGK 122