BLASTX nr result
ID: Coptis25_contig00032438
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00032438 (443 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002306233.1| predicted protein [Populus trichocarpa] gi|2... 119 2e-25 ref|XP_002328164.1| predicted protein [Populus trichocarpa] gi|2... 119 2e-25 ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containi... 119 3e-25 emb|CAN79022.1| hypothetical protein VITISV_022893 [Vitis vinifera] 119 3e-25 ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containi... 116 2e-24 >ref|XP_002306233.1| predicted protein [Populus trichocarpa] gi|222849197|gb|EEE86744.1| predicted protein [Populus trichocarpa] Length = 557 Score = 119 bits (299), Expect = 2e-25 Identities = 61/114 (53%), Positives = 82/114 (71%) Frame = +3 Query: 96 ESKFMYELGTCSKHNNLQGALSLYQTALSQNLRLNHNHYNTLIYLCSNSLINTTNQHHHD 275 ES+F Y L SK +L A+SLY TA+SQN RLN +++NTL+YLCS SL + + + Sbjct: 17 ESQFSYNLNFYSKSKDLHSAISLYDTAISQNTRLNQHNFNTLLYLCSISLNDPSTKD--- 73 Query: 276 LLLLTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFQLVKGMGKY 437 L+++ GF +F+ M+SN I P EA+IT+VARLAAAKGDGD+AF LVK +G Y Sbjct: 74 ---LSLQYGFRVFDHMVSNGIKPNEASITAVARLAAAKGDGDYAFDLVKNIGVY 124 >ref|XP_002328164.1| predicted protein [Populus trichocarpa] gi|222837679|gb|EEE76044.1| predicted protein [Populus trichocarpa] Length = 557 Score = 119 bits (299), Expect = 2e-25 Identities = 61/114 (53%), Positives = 82/114 (71%) Frame = +3 Query: 96 ESKFMYELGTCSKHNNLQGALSLYQTALSQNLRLNHNHYNTLIYLCSNSLINTTNQHHHD 275 ES+F Y L SK +L A+SLY TA+SQN RLN +++NTL+YLCS SL + + + Sbjct: 17 ESQFSYNLNFYSKSKDLHSAISLYDTAISQNTRLNQHNFNTLLYLCSISLNDPSTKD--- 73 Query: 276 LLLLTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFQLVKGMGKY 437 L+++ GF +F+ M+SN I P EA+IT+VARLAAAKGDGD+AF LVK +G Y Sbjct: 74 ---LSLQYGFRVFDHMVSNGIKPNEASITAVARLAAAKGDGDYAFDLVKNIGVY 124 >ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230, mitochondrial-like [Vitis vinifera] Length = 551 Score = 119 bits (298), Expect = 3e-25 Identities = 56/116 (48%), Positives = 85/116 (73%) Frame = +3 Query: 96 ESKFMYELGTCSKHNNLQGALSLYQTALSQNLRLNHNHYNTLIYLCSNSLINTTNQHHHD 275 E KF ++L TCSK +L GA++L+++A+SQN RL H H+N L+YLC+ S+ +++ Sbjct: 12 EGKFRFDLDTCSKRRDLSGAVALFESAVSQNFRLIHYHFNALLYLCTISIDEPSSK---- 67 Query: 276 LLLLTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFQLVKGMGKYKI 443 L ++ GF IF+ M+++ + P EATIT+VARLAAAK DGD AF++V+ MGKY++ Sbjct: 68 --ALALDYGFRIFDHMVNSGVTPNEATITAVARLAAAKSDGDLAFEVVRTMGKYEL 121 >emb|CAN79022.1| hypothetical protein VITISV_022893 [Vitis vinifera] Length = 509 Score = 119 bits (298), Expect = 3e-25 Identities = 56/116 (48%), Positives = 85/116 (73%) Frame = +3 Query: 96 ESKFMYELGTCSKHNNLQGALSLYQTALSQNLRLNHNHYNTLIYLCSNSLINTTNQHHHD 275 E KF ++L TCSK +L GA++L+++A+SQN RL H H+N L+YLC+ S+ +++ Sbjct: 12 EGKFRFDLDTCSKRRDLSGAVALFESAVSQNFRLIHYHFNALLYLCTISIDEPSSK---- 67 Query: 276 LLLLTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFQLVKGMGKYKI 443 L ++ GF IF+ M+++ + P EATIT+VARLAAAK DGD AF++V+ MGKY++ Sbjct: 68 --ALALDYGFRIFDHMVNSGVTPNEATITAVARLAAAKSDGDLAFEVVRTMGKYEL 121 >ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230, mitochondrial-like [Glycine max] Length = 550 Score = 116 bits (290), Expect = 2e-24 Identities = 58/113 (51%), Positives = 79/113 (69%) Frame = +3 Query: 96 ESKFMYELGTCSKHNNLQGALSLYQTALSQNLRLNHNHYNTLIYLCSNSLINTTNQHHHD 275 E+KF +EL +CSK +L+GA+SLY A+S N RLN +H+N L+YLCSNS+ + + Sbjct: 16 ETKFQFELNSCSKAKDLRGAISLYDDAVSNNTRLNQHHFNALLYLCSNSVADPS------ 69 Query: 276 LLLLTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFQLVKGMGK 434 L ++ GF F M + + P EAT+T+VARLAAAKGD D+AF+LVK MGK Sbjct: 70 LKPTALDYGFRAFRHMSALAVLPNEATVTAVARLAAAKGDADYAFELVKSMGK 122