BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032414
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307065.1| predicted protein [Populus trichocarpa] gi|2...   154   7e-36
ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein lig...   144   7e-33
ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein lig...   144   7e-33
ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   141   5e-32
ref|NP_680156.2| regulator of chromosome condensation repeat-con...   139   3e-31

>ref|XP_002307065.1| predicted protein [Populus trichocarpa] gi|222856514|gb|EEE94061.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score =  154 bits (389), Expect = 7e-36
 Identities = 71/99 (71%), Positives = 84/99 (84%)
 Frame = -2

Query: 299 HQSSILGFLRSSSEFTPRLIKSLEGHKVEHVSTGFLHSACIDENGSVYIFGERTIDKPVF 120
           HQSS+LGF RSSSE+TPR IK LEG KV++++ G LHSACIDENGSVYIFGE+ +DK  F
Sbjct: 207 HQSSLLGFFRSSSEYTPRHIKKLEGVKVKNIAAGLLHSACIDENGSVYIFGEKAVDKLAF 266

Query: 119 RKSNDATSPSLISKLPNCQEVVCGGYHTCVVTSGGELYT 3
             +N+AT+PS+I KLP  QEV CGGYHTCV+TSGGELYT
Sbjct: 267 GDANNATTPSMIGKLPYSQEVACGGYHTCVITSGGELYT 305


>ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Cucumis sativus]
          Length = 386

 Score =  144 bits (363), Expect = 7e-33
 Identities = 65/99 (65%), Positives = 83/99 (83%)
 Frame = -2

Query: 299 HQSSILGFLRSSSEFTPRLIKSLEGHKVEHVSTGFLHSACIDENGSVYIFGERTIDKPVF 120
           H+S+ LGFL+S+SE TPRLIK LEG KV+HV+ G LHSAC+DENG+VYIFGER  ++  F
Sbjct: 254 HESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERATNRVSF 313

Query: 119 RKSNDATSPSLISKLPNCQEVVCGGYHTCVVTSGGELYT 3
            ++N AT+PSLIS L +C+EV CGGYHTCV+T GG+LY+
Sbjct: 314 GEANKATTPSLISTLLDCEEVACGGYHTCVLTKGGDLYS 352


>ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
           sativus]
          Length = 481

 Score =  144 bits (363), Expect = 7e-33
 Identities = 65/99 (65%), Positives = 83/99 (83%)
 Frame = -2

Query: 299 HQSSILGFLRSSSEFTPRLIKSLEGHKVEHVSTGFLHSACIDENGSVYIFGERTIDKPVF 120
           H+S+ LGFL+S+SE TPRLIK LEG KV+HV+ G LHSAC+DENG+VYIFGER  ++  F
Sbjct: 271 HESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERATNRVSF 330

Query: 119 RKSNDATSPSLISKLPNCQEVVCGGYHTCVVTSGGELYT 3
            ++N AT+PSLIS L +C+EV CGGYHTCV+T GG+LY+
Sbjct: 331 GEANKATTPSLISTLLDCEEVACGGYHTCVLTKGGDLYS 369


>ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
           gi|296082630|emb|CBI21635.3| unnamed protein product
           [Vitis vinifera]
          Length = 420

 Score =  141 bits (356), Expect = 5e-32
 Identities = 64/99 (64%), Positives = 85/99 (85%)
 Frame = -2

Query: 299 HQSSILGFLRSSSEFTPRLIKSLEGHKVEHVSTGFLHSACIDENGSVYIFGERTIDKPVF 120
           H+SS+LGF R+SSE+ PRLI+ LEG KV++V+ G LHSACIDENGSV+IFGER +DK  F
Sbjct: 208 HESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACIDENGSVFIFGERAMDKFGF 267

Query: 119 RKSNDATSPSLISKLPNCQEVVCGGYHTCVVTSGGELYT 3
           R++ +AT+PS+IS+LP  ++V CGGYHTCV++S GEL+T
Sbjct: 268 REAKNATAPSMISELPYSKQVACGGYHTCVISSSGELFT 306


>ref|NP_680156.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana] gi|26452773|dbj|BAC43467.1|
           unknown protein [Arabidopsis thaliana]
           gi|28973187|gb|AAO63918.1| putative UVB-resistance
           protein UVR8 [Arabidopsis thaliana]
           gi|332003957|gb|AED91340.1| regulator of chromosome
           condensation repeat-containing protein [Arabidopsis
           thaliana]
          Length = 434

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/99 (65%), Positives = 80/99 (80%)
 Frame = -2

Query: 299 HQSSILGFLRSSSEFTPRLIKSLEGHKVEHVSTGFLHSACIDENGSVYIFGERTIDKPVF 120
           HQSS+ G LRS+SEFTPRLIK LEG KV +V+ G LHSAC DENGS ++FGE++I+K  F
Sbjct: 224 HQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGF 283

Query: 119 RKSNDATSPSLISKLPNCQEVVCGGYHTCVVTSGGELYT 3
               +AT+PS+IS++P  +EV CGGYHTCVVT GGELYT
Sbjct: 284 GGVRNATTPSIISEVPYAEEVACGGYHTCVVTRGGELYT 322