BLASTX nr result
ID: Coptis25_contig00032414
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00032414 (336 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002307065.1| predicted protein [Populus trichocarpa] gi|2... 154 7e-36 ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein lig... 144 7e-33 ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein lig... 144 7e-33 ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 141 5e-32 ref|NP_680156.2| regulator of chromosome condensation repeat-con... 139 3e-31 >ref|XP_002307065.1| predicted protein [Populus trichocarpa] gi|222856514|gb|EEE94061.1| predicted protein [Populus trichocarpa] Length = 419 Score = 154 bits (389), Expect = 7e-36 Identities = 71/99 (71%), Positives = 84/99 (84%) Frame = -2 Query: 299 HQSSILGFLRSSSEFTPRLIKSLEGHKVEHVSTGFLHSACIDENGSVYIFGERTIDKPVF 120 HQSS+LGF RSSSE+TPR IK LEG KV++++ G LHSACIDENGSVYIFGE+ +DK F Sbjct: 207 HQSSLLGFFRSSSEYTPRHIKKLEGVKVKNIAAGLLHSACIDENGSVYIFGEKAVDKLAF 266 Query: 119 RKSNDATSPSLISKLPNCQEVVCGGYHTCVVTSGGELYT 3 +N+AT+PS+I KLP QEV CGGYHTCV+TSGGELYT Sbjct: 267 GDANNATTPSMIGKLPYSQEVACGGYHTCVITSGGELYT 305 >ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial [Cucumis sativus] Length = 386 Score = 144 bits (363), Expect = 7e-33 Identities = 65/99 (65%), Positives = 83/99 (83%) Frame = -2 Query: 299 HQSSILGFLRSSSEFTPRLIKSLEGHKVEHVSTGFLHSACIDENGSVYIFGERTIDKPVF 120 H+S+ LGFL+S+SE TPRLIK LEG KV+HV+ G LHSAC+DENG+VYIFGER ++ F Sbjct: 254 HESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERATNRVSF 313 Query: 119 RKSNDATSPSLISKLPNCQEVVCGGYHTCVVTSGGELYT 3 ++N AT+PSLIS L +C+EV CGGYHTCV+T GG+LY+ Sbjct: 314 GEANKATTPSLISTLLDCEEVACGGYHTCVLTKGGDLYS 352 >ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis sativus] Length = 481 Score = 144 bits (363), Expect = 7e-33 Identities = 65/99 (65%), Positives = 83/99 (83%) Frame = -2 Query: 299 HQSSILGFLRSSSEFTPRLIKSLEGHKVEHVSTGFLHSACIDENGSVYIFGERTIDKPVF 120 H+S+ LGFL+S+SE TPRLIK LEG KV+HV+ G LHSAC+DENG+VYIFGER ++ F Sbjct: 271 HESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERATNRVSF 330 Query: 119 RKSNDATSPSLISKLPNCQEVVCGGYHTCVVTSGGELYT 3 ++N AT+PSLIS L +C+EV CGGYHTCV+T GG+LY+ Sbjct: 331 GEANKATTPSLISTLLDCEEVACGGYHTCVLTKGGDLYS 369 >ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera] gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera] Length = 420 Score = 141 bits (356), Expect = 5e-32 Identities = 64/99 (64%), Positives = 85/99 (85%) Frame = -2 Query: 299 HQSSILGFLRSSSEFTPRLIKSLEGHKVEHVSTGFLHSACIDENGSVYIFGERTIDKPVF 120 H+SS+LGF R+SSE+ PRLI+ LEG KV++V+ G LHSACIDENGSV+IFGER +DK F Sbjct: 208 HESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACIDENGSVFIFGERAMDKFGF 267 Query: 119 RKSNDATSPSLISKLPNCQEVVCGGYHTCVVTSGGELYT 3 R++ +AT+PS+IS+LP ++V CGGYHTCV++S GEL+T Sbjct: 268 REAKNATAPSMISELPYSKQVACGGYHTCVISSSGELFT 306 >ref|NP_680156.2| regulator of chromosome condensation repeat-containing protein [Arabidopsis thaliana] gi|26452773|dbj|BAC43467.1| unknown protein [Arabidopsis thaliana] gi|28973187|gb|AAO63918.1| putative UVB-resistance protein UVR8 [Arabidopsis thaliana] gi|332003957|gb|AED91340.1| regulator of chromosome condensation repeat-containing protein [Arabidopsis thaliana] Length = 434 Score = 139 bits (349), Expect = 3e-31 Identities = 65/99 (65%), Positives = 80/99 (80%) Frame = -2 Query: 299 HQSSILGFLRSSSEFTPRLIKSLEGHKVEHVSTGFLHSACIDENGSVYIFGERTIDKPVF 120 HQSS+ G LRS+SEFTPRLIK LEG KV +V+ G LHSAC DENGS ++FGE++I+K F Sbjct: 224 HQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGF 283 Query: 119 RKSNDATSPSLISKLPNCQEVVCGGYHTCVVTSGGELYT 3 +AT+PS+IS++P +EV CGGYHTCVVT GGELYT Sbjct: 284 GGVRNATTPSIISEVPYAEEVACGGYHTCVVTRGGELYT 322