BLASTX nr result
ID: Coptis25_contig00032409
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00032409 (1005 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002303333.1| predicted protein [Populus trichocarpa] gi|2... 291 2e-76 emb|CAN79607.1| hypothetical protein VITISV_027501 [Vitis vinifera] 278 1e-72 emb|CBI35792.3| unnamed protein product [Vitis vinifera] 278 2e-72 ref|XP_002271118.1| PREDICTED: pumilio homolog 23-like [Vitis vi... 278 2e-72 ref|XP_003521837.1| PREDICTED: pumilio homolog 23-like [Glycine ... 269 7e-70 >ref|XP_002303333.1| predicted protein [Populus trichocarpa] gi|222840765|gb|EEE78312.1| predicted protein [Populus trichocarpa] Length = 765 Score = 291 bits (745), Expect = 2e-76 Identities = 147/250 (58%), Positives = 184/250 (73%), Gaps = 6/250 (2%) Frame = +3 Query: 3 VCLPTESPSFVVPRILFLESYLWSEDKSNWKWASGERMHVLGCLMLQTIFKYPSEFIQSY 182 VCLP ESP VV RILFLESY +KSNWKW SG ++HV+G L+LQ +FK+ ++ IQ Y Sbjct: 467 VCLPNESPRSVVDRILFLESYFACVEKSNWKWPSGAKIHVMGSLILQAVFKFQNQLIQPY 526 Query: 183 AMSILSMEAEYALETAKDAGGGRVIESFLCSDASARQKRKFIAKLQGHFGELSMHPSGSY 362 MS+ SME ++ LE AKD GG R IE+FL SDAS +QK + I KL+GHFGEL+MH SGS+ Sbjct: 527 IMSLTSMEVDHVLEAAKDVGGARTIEAFLDSDASGKQKHRLINKLRGHFGELAMHSSGSF 586 Query: 363 TVEKCFSASNSSLKETIVSELLAVRPELSKTKQGPYLSKKLDIDGYATRPDQWKSRQESR 542 TVEKCFSASN SL+E I S+LL+V+ EL KTKQGPYL +KLDIDGYA RPDQW+SRQ S+ Sbjct: 587 TVEKCFSASNLSLREAIASDLLSVQSELPKTKQGPYLLRKLDIDGYANRPDQWRSRQASK 646 Query: 543 EKTHKEYYSIFGSGKTESSKRKSFSATEPPSDQQLPKGVKKVKQEMDQFLASS------G 704 + T+KE+Y+ FGSG+ +SSK SF A + L GVK V++E+D LASS Sbjct: 647 QSTYKEFYAAFGSGEVKSSKSDSFLA-DTSKSTSLAIGVKNVRKEIDHHLASSEKYAKHA 705 Query: 705 TSSDIMKRKD 734 D+MK K+ Sbjct: 706 VVDDVMKVKN 715 >emb|CAN79607.1| hypothetical protein VITISV_027501 [Vitis vinifera] Length = 1694 Score = 278 bits (712), Expect = 1e-72 Identities = 137/232 (59%), Positives = 174/232 (75%) Frame = +3 Query: 3 VCLPTESPSFVVPRILFLESYLWSEDKSNWKWASGERMHVLGCLMLQTIFKYPSEFIQSY 182 VC E P +VPRILFLESYL EDKSNW W G +MHVLG L+LQT+FK S FIQ Y Sbjct: 453 VCAANEPPKCIVPRILFLESYLCCEDKSNWTWPRGVKMHVLGSLILQTVFKCLSGFIQPY 512 Query: 183 AMSILSMEAEYALETAKDAGGGRVIESFLCSDASARQKRKFIAKLQGHFGELSMHPSGSY 362 SI SME ++ LE AKDAGG RVIE+FL S+AS + K++ + KL+GHFGEL+MHPSGS+ Sbjct: 513 VSSITSMETDHVLEAAKDAGGARVIEAFLSSNASKKHKQRLVVKLRGHFGELAMHPSGSF 572 Query: 363 TVEKCFSASNSSLKETIVSELLAVRPELSKTKQGPYLSKKLDIDGYATRPDQWKSRQESR 542 TVEKCF+A N SL+ETI+ ELLAVR ELSKTK GP+L ++LD+D +A PDQW+ +Q S+ Sbjct: 573 TVEKCFTACNVSLRETIMHELLAVRTELSKTKHGPHLLRRLDVDRFAAWPDQWRLKQSSK 632 Query: 543 EKTHKEYYSIFGSGKTESSKRKSFSATEPPSDQQLPKGVKKVKQEMDQFLAS 698 E +K++Y+ FGS +T+SSK SF +P PK VK +++E+DQ LAS Sbjct: 633 ESAYKDFYATFGSKETQSSKTDSF--VDPSYHSSHPKSVKAMRKEIDQCLAS 682 >emb|CBI35792.3| unnamed protein product [Vitis vinifera] Length = 755 Score = 278 bits (710), Expect = 2e-72 Identities = 137/232 (59%), Positives = 174/232 (75%) Frame = +3 Query: 3 VCLPTESPSFVVPRILFLESYLWSEDKSNWKWASGERMHVLGCLMLQTIFKYPSEFIQSY 182 VC E P +VPRILFLESYL EDKSNW W G +MHVLG L+LQT+FK S FIQ Y Sbjct: 438 VCPANEPPKCIVPRILFLESYLCCEDKSNWTWPRGVKMHVLGSLILQTVFKCLSGFIQPY 497 Query: 183 AMSILSMEAEYALETAKDAGGGRVIESFLCSDASARQKRKFIAKLQGHFGELSMHPSGSY 362 SI SME ++ LE AKDAGG RVIE+FL S+AS + K++ + KL+GHFGEL+MHPSGS+ Sbjct: 498 VSSITSMETDHVLEAAKDAGGARVIEAFLSSNASKKHKQRLVVKLRGHFGELAMHPSGSF 557 Query: 363 TVEKCFSASNSSLKETIVSELLAVRPELSKTKQGPYLSKKLDIDGYATRPDQWKSRQESR 542 TVEKCF+A N SL+ETI+ ELLAVR ELSKTK GP+L ++LD+D +A PDQW+ +Q S+ Sbjct: 558 TVEKCFTACNVSLRETIMHELLAVRTELSKTKHGPHLLRRLDVDRFAAWPDQWRLKQSSK 617 Query: 543 EKTHKEYYSIFGSGKTESSKRKSFSATEPPSDQQLPKGVKKVKQEMDQFLAS 698 E +K++Y+ FGS +T+SSK SF +P PK VK +++E+DQ LAS Sbjct: 618 ESAYKDFYATFGSKETQSSKTDSF--VDPSYHSSHPKSVKAMRKEIDQCLAS 667 >ref|XP_002271118.1| PREDICTED: pumilio homolog 23-like [Vitis vinifera] Length = 857 Score = 278 bits (710), Expect = 2e-72 Identities = 137/232 (59%), Positives = 174/232 (75%) Frame = +3 Query: 3 VCLPTESPSFVVPRILFLESYLWSEDKSNWKWASGERMHVLGCLMLQTIFKYPSEFIQSY 182 VC E P +VPRILFLESYL EDKSNW W G +MHVLG L+LQT+FK S FIQ Y Sbjct: 462 VCPANEPPKCIVPRILFLESYLCCEDKSNWTWPRGVKMHVLGSLILQTVFKCLSGFIQPY 521 Query: 183 AMSILSMEAEYALETAKDAGGGRVIESFLCSDASARQKRKFIAKLQGHFGELSMHPSGSY 362 SI SME ++ LE AKDAGG RVIE+FL S+AS + K++ + KL+GHFGEL+MHPSGS+ Sbjct: 522 VSSITSMETDHVLEAAKDAGGARVIEAFLSSNASKKHKQRLVVKLRGHFGELAMHPSGSF 581 Query: 363 TVEKCFSASNSSLKETIVSELLAVRPELSKTKQGPYLSKKLDIDGYATRPDQWKSRQESR 542 TVEKCF+A N SL+ETI+ ELLAVR ELSKTK GP+L ++LD+D +A PDQW+ +Q S+ Sbjct: 582 TVEKCFTACNVSLRETIMHELLAVRTELSKTKHGPHLLRRLDVDRFAAWPDQWRLKQSSK 641 Query: 543 EKTHKEYYSIFGSGKTESSKRKSFSATEPPSDQQLPKGVKKVKQEMDQFLAS 698 E +K++Y+ FGS +T+SSK SF +P PK VK +++E+DQ LAS Sbjct: 642 ESAYKDFYATFGSKETQSSKTDSF--VDPSYHSSHPKSVKAMRKEIDQCLAS 691 >ref|XP_003521837.1| PREDICTED: pumilio homolog 23-like [Glycine max] Length = 745 Score = 269 bits (688), Expect = 7e-70 Identities = 132/253 (52%), Positives = 182/253 (71%) Frame = +3 Query: 3 VCLPTESPSFVVPRILFLESYLWSEDKSNWKWASGERMHVLGCLMLQTIFKYPSEFIQSY 182 VC ESP ++VPR+LFL+S SEDKSNW W SG +MHV+G L+LQT+F++ SE IQ Y Sbjct: 434 VCPVDESPKWIVPRLLFLDSCFTSEDKSNWSWQSGSKMHVMGSLILQTVFRFRSECIQPY 493 Query: 183 AMSILSMEAEYALETAKDAGGGRVIESFLCSDASARQKRKFIAKLQGHFGELSMHPSGSY 362 +SI SMEA + LE DA G VIE+FLCS AS +QKR+ + KLQGHFGE+++ SG++ Sbjct: 494 IISITSMEATHVLEAVVDARGSHVIEAFLCSGASGKQKRRLVTKLQGHFGEVALTSSGAF 553 Query: 363 TVEKCFSASNSSLKETIVSELLAVRPELSKTKQGPYLSKKLDIDGYATRPDQWKSRQESR 542 T+EKCF+ASN SL+E IVSE+LAVR +LSK KQG YL +KLDIDGYA PD W+S+Q S+ Sbjct: 554 TIEKCFTASNLSLREAIVSEMLAVRSDLSKAKQGSYLLRKLDIDGYAANPDHWRSKQASK 613 Query: 543 EKTHKEYYSIFGSGKTESSKRKSFSATEPPSDQQLPKGVKKVKQEMDQFLASSGTSSDIM 722 E T+K++Y++FGS T+ ++ +F A + +++ K VK++++E+DQ L S Sbjct: 614 ESTYKDFYTMFGSSDTKLTENDAFLA-DTSNNKSNKKTVKEMRKEIDQSLGSGAPFLSTQ 672 Query: 723 KRKDNGKGKIRKA 761 K N K + K+ Sbjct: 673 NFKKNPKKEKHKS 685