BLASTX nr result

ID: Coptis25_contig00032409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032409
         (1005 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303333.1| predicted protein [Populus trichocarpa] gi|2...   291   2e-76
emb|CAN79607.1| hypothetical protein VITISV_027501 [Vitis vinifera]   278   1e-72
emb|CBI35792.3| unnamed protein product [Vitis vinifera]              278   2e-72
ref|XP_002271118.1| PREDICTED: pumilio homolog 23-like [Vitis vi...   278   2e-72
ref|XP_003521837.1| PREDICTED: pumilio homolog 23-like [Glycine ...   269   7e-70

>ref|XP_002303333.1| predicted protein [Populus trichocarpa] gi|222840765|gb|EEE78312.1|
            predicted protein [Populus trichocarpa]
          Length = 765

 Score =  291 bits (745), Expect = 2e-76
 Identities = 147/250 (58%), Positives = 184/250 (73%), Gaps = 6/250 (2%)
 Frame = +3

Query: 3    VCLPTESPSFVVPRILFLESYLWSEDKSNWKWASGERMHVLGCLMLQTIFKYPSEFIQSY 182
            VCLP ESP  VV RILFLESY    +KSNWKW SG ++HV+G L+LQ +FK+ ++ IQ Y
Sbjct: 467  VCLPNESPRSVVDRILFLESYFACVEKSNWKWPSGAKIHVMGSLILQAVFKFQNQLIQPY 526

Query: 183  AMSILSMEAEYALETAKDAGGGRVIESFLCSDASARQKRKFIAKLQGHFGELSMHPSGSY 362
             MS+ SME ++ LE AKD GG R IE+FL SDAS +QK + I KL+GHFGEL+MH SGS+
Sbjct: 527  IMSLTSMEVDHVLEAAKDVGGARTIEAFLDSDASGKQKHRLINKLRGHFGELAMHSSGSF 586

Query: 363  TVEKCFSASNSSLKETIVSELLAVRPELSKTKQGPYLSKKLDIDGYATRPDQWKSRQESR 542
            TVEKCFSASN SL+E I S+LL+V+ EL KTKQGPYL +KLDIDGYA RPDQW+SRQ S+
Sbjct: 587  TVEKCFSASNLSLREAIASDLLSVQSELPKTKQGPYLLRKLDIDGYANRPDQWRSRQASK 646

Query: 543  EKTHKEYYSIFGSGKTESSKRKSFSATEPPSDQQLPKGVKKVKQEMDQFLASS------G 704
            + T+KE+Y+ FGSG+ +SSK  SF A +      L  GVK V++E+D  LASS       
Sbjct: 647  QSTYKEFYAAFGSGEVKSSKSDSFLA-DTSKSTSLAIGVKNVRKEIDHHLASSEKYAKHA 705

Query: 705  TSSDIMKRKD 734
               D+MK K+
Sbjct: 706  VVDDVMKVKN 715


>emb|CAN79607.1| hypothetical protein VITISV_027501 [Vitis vinifera]
          Length = 1694

 Score =  278 bits (712), Expect = 1e-72
 Identities = 137/232 (59%), Positives = 174/232 (75%)
 Frame = +3

Query: 3    VCLPTESPSFVVPRILFLESYLWSEDKSNWKWASGERMHVLGCLMLQTIFKYPSEFIQSY 182
            VC   E P  +VPRILFLESYL  EDKSNW W  G +MHVLG L+LQT+FK  S FIQ Y
Sbjct: 453  VCAANEPPKCIVPRILFLESYLCCEDKSNWTWPRGVKMHVLGSLILQTVFKCLSGFIQPY 512

Query: 183  AMSILSMEAEYALETAKDAGGGRVIESFLCSDASARQKRKFIAKLQGHFGELSMHPSGSY 362
              SI SME ++ LE AKDAGG RVIE+FL S+AS + K++ + KL+GHFGEL+MHPSGS+
Sbjct: 513  VSSITSMETDHVLEAAKDAGGARVIEAFLSSNASKKHKQRLVVKLRGHFGELAMHPSGSF 572

Query: 363  TVEKCFSASNSSLKETIVSELLAVRPELSKTKQGPYLSKKLDIDGYATRPDQWKSRQESR 542
            TVEKCF+A N SL+ETI+ ELLAVR ELSKTK GP+L ++LD+D +A  PDQW+ +Q S+
Sbjct: 573  TVEKCFTACNVSLRETIMHELLAVRTELSKTKHGPHLLRRLDVDRFAAWPDQWRLKQSSK 632

Query: 543  EKTHKEYYSIFGSGKTESSKRKSFSATEPPSDQQLPKGVKKVKQEMDQFLAS 698
            E  +K++Y+ FGS +T+SSK  SF   +P      PK VK +++E+DQ LAS
Sbjct: 633  ESAYKDFYATFGSKETQSSKTDSF--VDPSYHSSHPKSVKAMRKEIDQCLAS 682


>emb|CBI35792.3| unnamed protein product [Vitis vinifera]
          Length = 755

 Score =  278 bits (710), Expect = 2e-72
 Identities = 137/232 (59%), Positives = 174/232 (75%)
 Frame = +3

Query: 3    VCLPTESPSFVVPRILFLESYLWSEDKSNWKWASGERMHVLGCLMLQTIFKYPSEFIQSY 182
            VC   E P  +VPRILFLESYL  EDKSNW W  G +MHVLG L+LQT+FK  S FIQ Y
Sbjct: 438  VCPANEPPKCIVPRILFLESYLCCEDKSNWTWPRGVKMHVLGSLILQTVFKCLSGFIQPY 497

Query: 183  AMSILSMEAEYALETAKDAGGGRVIESFLCSDASARQKRKFIAKLQGHFGELSMHPSGSY 362
              SI SME ++ LE AKDAGG RVIE+FL S+AS + K++ + KL+GHFGEL+MHPSGS+
Sbjct: 498  VSSITSMETDHVLEAAKDAGGARVIEAFLSSNASKKHKQRLVVKLRGHFGELAMHPSGSF 557

Query: 363  TVEKCFSASNSSLKETIVSELLAVRPELSKTKQGPYLSKKLDIDGYATRPDQWKSRQESR 542
            TVEKCF+A N SL+ETI+ ELLAVR ELSKTK GP+L ++LD+D +A  PDQW+ +Q S+
Sbjct: 558  TVEKCFTACNVSLRETIMHELLAVRTELSKTKHGPHLLRRLDVDRFAAWPDQWRLKQSSK 617

Query: 543  EKTHKEYYSIFGSGKTESSKRKSFSATEPPSDQQLPKGVKKVKQEMDQFLAS 698
            E  +K++Y+ FGS +T+SSK  SF   +P      PK VK +++E+DQ LAS
Sbjct: 618  ESAYKDFYATFGSKETQSSKTDSF--VDPSYHSSHPKSVKAMRKEIDQCLAS 667


>ref|XP_002271118.1| PREDICTED: pumilio homolog 23-like [Vitis vinifera]
          Length = 857

 Score =  278 bits (710), Expect = 2e-72
 Identities = 137/232 (59%), Positives = 174/232 (75%)
 Frame = +3

Query: 3    VCLPTESPSFVVPRILFLESYLWSEDKSNWKWASGERMHVLGCLMLQTIFKYPSEFIQSY 182
            VC   E P  +VPRILFLESYL  EDKSNW W  G +MHVLG L+LQT+FK  S FIQ Y
Sbjct: 462  VCPANEPPKCIVPRILFLESYLCCEDKSNWTWPRGVKMHVLGSLILQTVFKCLSGFIQPY 521

Query: 183  AMSILSMEAEYALETAKDAGGGRVIESFLCSDASARQKRKFIAKLQGHFGELSMHPSGSY 362
              SI SME ++ LE AKDAGG RVIE+FL S+AS + K++ + KL+GHFGEL+MHPSGS+
Sbjct: 522  VSSITSMETDHVLEAAKDAGGARVIEAFLSSNASKKHKQRLVVKLRGHFGELAMHPSGSF 581

Query: 363  TVEKCFSASNSSLKETIVSELLAVRPELSKTKQGPYLSKKLDIDGYATRPDQWKSRQESR 542
            TVEKCF+A N SL+ETI+ ELLAVR ELSKTK GP+L ++LD+D +A  PDQW+ +Q S+
Sbjct: 582  TVEKCFTACNVSLRETIMHELLAVRTELSKTKHGPHLLRRLDVDRFAAWPDQWRLKQSSK 641

Query: 543  EKTHKEYYSIFGSGKTESSKRKSFSATEPPSDQQLPKGVKKVKQEMDQFLAS 698
            E  +K++Y+ FGS +T+SSK  SF   +P      PK VK +++E+DQ LAS
Sbjct: 642  ESAYKDFYATFGSKETQSSKTDSF--VDPSYHSSHPKSVKAMRKEIDQCLAS 691


>ref|XP_003521837.1| PREDICTED: pumilio homolog 23-like [Glycine max]
          Length = 745

 Score =  269 bits (688), Expect = 7e-70
 Identities = 132/253 (52%), Positives = 182/253 (71%)
 Frame = +3

Query: 3    VCLPTESPSFVVPRILFLESYLWSEDKSNWKWASGERMHVLGCLMLQTIFKYPSEFIQSY 182
            VC   ESP ++VPR+LFL+S   SEDKSNW W SG +MHV+G L+LQT+F++ SE IQ Y
Sbjct: 434  VCPVDESPKWIVPRLLFLDSCFTSEDKSNWSWQSGSKMHVMGSLILQTVFRFRSECIQPY 493

Query: 183  AMSILSMEAEYALETAKDAGGGRVIESFLCSDASARQKRKFIAKLQGHFGELSMHPSGSY 362
             +SI SMEA + LE   DA G  VIE+FLCS AS +QKR+ + KLQGHFGE+++  SG++
Sbjct: 494  IISITSMEATHVLEAVVDARGSHVIEAFLCSGASGKQKRRLVTKLQGHFGEVALTSSGAF 553

Query: 363  TVEKCFSASNSSLKETIVSELLAVRPELSKTKQGPYLSKKLDIDGYATRPDQWKSRQESR 542
            T+EKCF+ASN SL+E IVSE+LAVR +LSK KQG YL +KLDIDGYA  PD W+S+Q S+
Sbjct: 554  TIEKCFTASNLSLREAIVSEMLAVRSDLSKAKQGSYLLRKLDIDGYAANPDHWRSKQASK 613

Query: 543  EKTHKEYYSIFGSGKTESSKRKSFSATEPPSDQQLPKGVKKVKQEMDQFLASSGTSSDIM 722
            E T+K++Y++FGS  T+ ++  +F A +  +++   K VK++++E+DQ L S        
Sbjct: 614  ESTYKDFYTMFGSSDTKLTENDAFLA-DTSNNKSNKKTVKEMRKEIDQSLGSGAPFLSTQ 672

Query: 723  KRKDNGKGKIRKA 761
              K N K +  K+
Sbjct: 673  NFKKNPKKEKHKS 685


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