BLASTX nr result

ID: Coptis25_contig00032398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032398
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634649.1| PREDICTED: lactase-phlorizin hydrolase [Viti...   182   4e-44
emb|CBI20346.3| unnamed protein product [Vitis vinifera]              182   4e-44
emb|CBI20347.3| unnamed protein product [Vitis vinifera]              176   2e-42
ref|XP_002329151.1| predicted protein [Populus trichocarpa] gi|2...   174   1e-41
ref|XP_003547247.1| PREDICTED: beta-glucosidase 47-like [Glycine...   167   1e-39

>ref|XP_003634649.1| PREDICTED: lactase-phlorizin hydrolase [Vitis vinifera]
          Length = 1032

 Score =  182 bits (462), Expect = 4e-44
 Identities = 86/130 (66%), Positives = 100/130 (76%), Gaps = 4/130 (3%)
 Frame = +3

Query: 9    YVVPNGMEKIIGYLKRRYNNKPMFVTENGFPQKNVPIEQVKELIHDVKRVEFHKSYLASL 188
            ++VP GMEKII Y+K RYNN PMFVTENG+       EQ ++L+ D KR+EFHK+YLA+L
Sbjct: 891  FIVPRGMEKIIEYVKERYNNMPMFVTENGYSPPEKEDEQEEDLVQDAKRIEFHKAYLAAL 950

Query: 189  ARAIEDGADVRGYFIWSLMDNFEWTSGYNLRFGLHYVDFQTLKRTPKSSATWYKNFLSNG 368
            ARAI +GADVRGYFIWSLMDNFEW  GYN RFGL+YVD QTL+RTPK SA WY NFL+N 
Sbjct: 951  ARAIRNGADVRGYFIWSLMDNFEWVYGYNTRFGLYYVDRQTLRRTPKLSARWYANFLTNS 1010

Query: 369  ----TEDKQP 386
                 ED  P
Sbjct: 1011 GHNHVEDANP 1020



 Score =  176 bits (447), Expect = 2e-42
 Identities = 79/122 (64%), Positives = 102/122 (83%)
 Frame = +3

Query: 9   YVVPNGMEKIIGYLKRRYNNKPMFVTENGFPQKNVPIEQVKELIHDVKRVEFHKSYLASL 188
           YVVP+G+EK+I YLK RYNNKP+FVTENG  Q + P E+ + L++D KRVE+HK YLASL
Sbjct: 391 YVVPSGLEKLIDYLKTRYNNKPIFVTENGLSQMDQPEERNRVLLNDTKRVEYHKGYLASL 450

Query: 189 ARAIEDGADVRGYFIWSLMDNFEWTSGYNLRFGLHYVDFQTLKRTPKSSATWYKNFLSNG 368
           A+AI  GADVRGYF+WSL+DNFEWT+GY++RFGL+YVD++TL R PK S+ WY +FLS  
Sbjct: 451 AQAIRKGADVRGYFVWSLLDNFEWTNGYSIRFGLYYVDYKTLCRIPKFSSKWYTSFLSYN 510

Query: 369 TE 374
           ++
Sbjct: 511 SQ 512


>emb|CBI20346.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score =  182 bits (462), Expect = 4e-44
 Identities = 86/130 (66%), Positives = 100/130 (76%), Gaps = 4/130 (3%)
 Frame = +3

Query: 9   YVVPNGMEKIIGYLKRRYNNKPMFVTENGFPQKNVPIEQVKELIHDVKRVEFHKSYLASL 188
           ++VP GMEKII Y+K RYNN PMFVTENG+       EQ ++L+ D KR+EFHK+YLA+L
Sbjct: 386 FIVPRGMEKIIEYVKERYNNMPMFVTENGYSPPEKEDEQEEDLVQDAKRIEFHKAYLAAL 445

Query: 189 ARAIEDGADVRGYFIWSLMDNFEWTSGYNLRFGLHYVDFQTLKRTPKSSATWYKNFLSNG 368
           ARAI +GADVRGYFIWSLMDNFEW  GYN RFGL+YVD QTL+RTPK SA WY NFL+N 
Sbjct: 446 ARAIRNGADVRGYFIWSLMDNFEWVYGYNTRFGLYYVDRQTLRRTPKLSARWYANFLTNS 505

Query: 369 ----TEDKQP 386
                ED  P
Sbjct: 506 GHNHVEDANP 515


>emb|CBI20347.3| unnamed protein product [Vitis vinifera]
          Length = 529

 Score =  176 bits (447), Expect = 2e-42
 Identities = 79/122 (64%), Positives = 102/122 (83%)
 Frame = +3

Query: 9   YVVPNGMEKIIGYLKRRYNNKPMFVTENGFPQKNVPIEQVKELIHDVKRVEFHKSYLASL 188
           YVVP+G+EK+I YLK RYNNKP+FVTENG  Q + P E+ + L++D KRVE+HK YLASL
Sbjct: 382 YVVPSGLEKLIDYLKTRYNNKPIFVTENGLSQMDQPEERNRVLLNDTKRVEYHKGYLASL 441

Query: 189 ARAIEDGADVRGYFIWSLMDNFEWTSGYNLRFGLHYVDFQTLKRTPKSSATWYKNFLSNG 368
           A+AI  GADVRGYF+WSL+DNFEWT+GY++RFGL+YVD++TL R PK S+ WY +FLS  
Sbjct: 442 AQAIRKGADVRGYFVWSLLDNFEWTNGYSIRFGLYYVDYKTLCRIPKFSSKWYTSFLSYN 501

Query: 369 TE 374
           ++
Sbjct: 502 SQ 503


>ref|XP_002329151.1| predicted protein [Populus trichocarpa] gi|222869820|gb|EEF06951.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score =  174 bits (440), Expect = 1e-41
 Identities = 82/119 (68%), Positives = 97/119 (81%), Gaps = 2/119 (1%)
 Frame = +3

Query: 9   YVVPNGMEKIIGYLKRRYNNKPMFVTENGF--PQKNVPIEQVKELIHDVKRVEFHKSYLA 182
           +VVP GMEKI+ Y+K RYNN PMFVTENGF  PQ+N   +QV+ L+ D  RV FHKSYLA
Sbjct: 354 FVVPEGMEKIVNYMKERYNNMPMFVTENGFSPPQQN---DQVQALLQDTNRVNFHKSYLA 410

Query: 183 SLARAIEDGADVRGYFIWSLMDNFEWTSGYNLRFGLHYVDFQTLKRTPKSSATWYKNFL 359
           +LARAI +GADVRGYF+WSL+DNFEW  GY+ R+GL+YVD QTL+R PK SA WYKNFL
Sbjct: 411 ALARAIRNGADVRGYFVWSLVDNFEWIDGYSQRYGLYYVDRQTLERVPKLSAKWYKNFL 469


>ref|XP_003547247.1| PREDICTED: beta-glucosidase 47-like [Glycine max]
          Length = 525

 Score =  167 bits (424), Expect = 1e-39
 Identities = 75/120 (62%), Positives = 94/120 (78%)
 Frame = +3

Query: 3   YMYVVPNGMEKIIGYLKRRYNNKPMFVTENGFPQKNVPIEQVKELIHDVKRVEFHKSYLA 182
           ++YV P GMEKI+ YLK RYNN PMF+TENG   +       KE+I+DV+RVE+ + YL 
Sbjct: 391 WLYVHPQGMEKILTYLKHRYNNIPMFITENGIGMRENSNHATKEIINDVERVEYLRGYLD 450

Query: 183 SLARAIEDGADVRGYFIWSLMDNFEWTSGYNLRFGLHYVDFQTLKRTPKSSATWYKNFLS 362
           SLA AI  GADVRGYF+WSL+DNFEWT GY++RFGLH+VD+ TL RTP+ SA WYKNF++
Sbjct: 451 SLATAIRKGADVRGYFVWSLLDNFEWTDGYSIRFGLHHVDYATLNRTPRMSAFWYKNFIA 510


Top