BLASTX nr result

ID: Coptis25_contig00032396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032396
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520550.1| eukaryotic translation initiation factor 2c,...   151   6e-35
ref|XP_002274220.2| PREDICTED: protein argonaute 2-like [Vitis v...   144   7e-33
emb|CBI29068.3| unnamed protein product [Vitis vinifera]              144   7e-33
emb|CAN66699.1| hypothetical protein VITISV_007817 [Vitis vinifera]   144   7e-33
ref|XP_002332150.1| argonaute protein group [Populus trichocarpa...   139   3e-31

>ref|XP_002520550.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223540264|gb|EEF41836.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 492

 Score =  151 bits (381), Expect = 6e-35
 Identities = 76/131 (58%), Positives = 94/131 (71%)
 Frame = +2

Query: 2   CEPSNMNVLSDTIALRDLLKHLNQRADQAGKGRLQILICVMSRRDPGYKNLKKICETEIG 181
           C PS M+ L++   L  LL+ +  RA+QAGKGRLQILICVMSR+DPGYK LK I ET++G
Sbjct: 112 CHPSTMHKLTNIDLLHHLLEIVIDRANQAGKGRLQILICVMSRKDPGYKYLKWISETKVG 171

Query: 182 IMTQCCLVSHANIGKDIYXXXXXXXXXXXXGGSNMELFDRLPRLEDDCHVMFIGADVNHP 361
           ++TQCCL  +AN G D Y            GG+N+EL DRLP  E + HVMF+GADVNHP
Sbjct: 172 VVTQCCLSDYANKGHDQYFANLALKINAKLGGNNVELNDRLPYFEGEDHVMFLGADVNHP 231

Query: 362 GAWNTSSPSIA 394
           G+ NT+SPSIA
Sbjct: 232 GSRNTTSPSIA 242


>ref|XP_002274220.2| PREDICTED: protein argonaute 2-like [Vitis vinifera]
          Length = 1038

 Score =  144 bits (363), Expect = 7e-33
 Identities = 71/130 (54%), Positives = 88/130 (67%)
 Frame = +2

Query: 5    EPSNMNVLSDTIALRDLLKHLNQRADQAGKGRLQILICVMSRRDPGYKNLKKICETEIGI 184
            + S MN  S+   LR+LL  +  RA  + K +LQIL+CVM+R+DPGY  LK  CET IGI
Sbjct: 665  QSSRMNAFSNVAMLRELLLGVAGRAHDSTKNQLQILVCVMARKDPGYNYLKWFCETNIGI 724

Query: 185  MTQCCLVSHANIGKDIYXXXXXXXXXXXXGGSNMELFDRLPRLEDDCHVMFIGADVNHPG 364
            +TQCCL S AN   D Y            GGSN+EL DRLP  E++ +VMF+GADVNHPG
Sbjct: 725  VTQCCLSSPANKANDQYLANLALKMNAKLGGSNVELIDRLPHFENEGYVMFVGADVNHPG 784

Query: 365  AWNTSSPSIA 394
            AWN++SPSIA
Sbjct: 785  AWNSASPSIA 794


>emb|CBI29068.3| unnamed protein product [Vitis vinifera]
          Length = 994

 Score =  144 bits (363), Expect = 7e-33
 Identities = 71/130 (54%), Positives = 88/130 (67%)
 Frame = +2

Query: 5    EPSNMNVLSDTIALRDLLKHLNQRADQAGKGRLQILICVMSRRDPGYKNLKKICETEIGI 184
            + S MN  S+   LR+LL  +  RA  + K +LQIL+CVM+R+DPGY  LK  CET IGI
Sbjct: 621  QSSRMNAFSNVAMLRELLLGVAGRAHDSTKNQLQILVCVMARKDPGYNYLKWFCETNIGI 680

Query: 185  MTQCCLVSHANIGKDIYXXXXXXXXXXXXGGSNMELFDRLPRLEDDCHVMFIGADVNHPG 364
            +TQCCL S AN   D Y            GGSN+EL DRLP  E++ +VMF+GADVNHPG
Sbjct: 681  VTQCCLSSPANKANDQYLANLALKMNAKLGGSNVELIDRLPHFENEGYVMFVGADVNHPG 740

Query: 365  AWNTSSPSIA 394
            AWN++SPSIA
Sbjct: 741  AWNSASPSIA 750


>emb|CAN66699.1| hypothetical protein VITISV_007817 [Vitis vinifera]
          Length = 1059

 Score =  144 bits (363), Expect = 7e-33
 Identities = 71/130 (54%), Positives = 88/130 (67%)
 Frame = +2

Query: 5    EPSNMNVLSDTIALRDLLKHLNQRADQAGKGRLQILICVMSRRDPGYKNLKKICETEIGI 184
            + S MN  S+   LR+LL  +  RA  + K +LQIL+CVM+R+DPGY  LK  CET IGI
Sbjct: 686  QSSRMNAFSNVAMLRELLLGVAGRAHDSTKNQLQILVCVMARKDPGYNYLKWFCETNIGI 745

Query: 185  MTQCCLVSHANIGKDIYXXXXXXXXXXXXGGSNMELFDRLPRLEDDCHVMFIGADVNHPG 364
            +TQCCL S AN   D Y            GGSN+EL DRLP  E++ +VMF+GADVNHPG
Sbjct: 746  VTQCCLSSPANKANDQYLANLALKMNAKLGGSNVELIDRLPHFENEGYVMFVGADVNHPG 805

Query: 365  AWNTSSPSIA 394
            AWN++SPSIA
Sbjct: 806  AWNSASPSIA 815


>ref|XP_002332150.1| argonaute protein group [Populus trichocarpa]
            gi|222875200|gb|EEF12331.1| argonaute protein group
            [Populus trichocarpa]
          Length = 1020

 Score =  139 bits (349), Expect = 3e-31
 Identities = 71/132 (53%), Positives = 91/132 (68%), Gaps = 2/132 (1%)
 Frame = +2

Query: 5    EPSNMNVLSDTIA--LRDLLKHLNQRADQAGKGRLQILICVMSRRDPGYKNLKKICETEI 178
            EP++M + S++    LR+LL+ +N RA +  +G+LQ L+CVMS++DPGYK LK ICET++
Sbjct: 641  EPTSMRLFSNSNVDRLRELLERVNGRARKISRGQLQFLLCVMSKKDPGYKYLKWICETKV 700

Query: 179  GIMTQCCLVSHANIGKDIYXXXXXXXXXXXXGGSNMELFDRLPRLEDDCHVMFIGADVNH 358
            GI+TQCCL   AN   D Y            GGSN EL DRLP   D+ H+MFIGADVNH
Sbjct: 701  GIVTQCCLSRSANKVNDQYLANIGLKINAKLGGSNAELSDRLPYFGDENHIMFIGADVNH 760

Query: 359  PGAWNTSSPSIA 394
            P A NT+SPSIA
Sbjct: 761  PAARNTTSPSIA 772


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