BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032389
         (1190 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160219.1| PREDICTED: splicing factor U2af large subuni...    85   3e-14
ref|XP_004138355.1| PREDICTED: splicing factor U2af large subuni...    85   3e-14
ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Sela...    85   4e-14
ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Sela...    85   4e-14
ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni...    84   5e-14

>ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
            sativus]
          Length = 587

 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 50/120 (41%), Positives = 69/120 (57%), Gaps = 7/120 (5%)
 Frame = +1

Query: 820  TGPPMGT--TVPKTTGTSQVRRHARRVYVDGFSSQTDVQAITIFFNSRISG----SRDPG 981
            TG P G    +P    T Q  RHARRVYV G     + Q++  FF+  ++     +  PG
Sbjct: 230  TGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPG 289

Query: 982  -AVLHVYLNKQKSFAIVELRSEEEAIAALELDCKLFKGTMLRIRHPSDYNRMLDPDFIPS 1158
             AV++VY+N +K FA VE+RS EEA  A+ LD  +F+G  +++R PSDYN  L     PS
Sbjct: 290  DAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPS 349


>ref|XP_004138355.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
            sativus]
          Length = 587

 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 50/120 (41%), Positives = 69/120 (57%), Gaps = 7/120 (5%)
 Frame = +1

Query: 820  TGPPMGT--TVPKTTGTSQVRRHARRVYVDGFSSQTDVQAITIFFNSRISG----SRDPG 981
            TG P G    +P    T Q  RHARRVYV G     + Q++  FF+  ++     +  PG
Sbjct: 230  TGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPG 289

Query: 982  -AVLHVYLNKQKSFAIVELRSEEEAIAALELDCKLFKGTMLRIRHPSDYNRMLDPDFIPS 1158
             AV++VY+N +K FA VE+RS EEA  A+ LD  +F+G  +++R PSDYN  L     PS
Sbjct: 290  DAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPS 349


>ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
            gi|300142484|gb|EFJ09184.1| hypothetical protein
            SELMODRAFT_160385 [Selaginella moellendorffii]
          Length = 421

 Score = 84.7 bits (208), Expect = 4e-14
 Identities = 48/111 (43%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
 Frame = +1

Query: 841  TVPKTTGTSQVRRHARRVYVDGFSSQTDVQAITIFFNSRISG----SRDPG-AVLHVYLN 1005
            T+P    T Q  RHARRVYV G     + Q I  FF+  +S     +  PG AV++VY+N
Sbjct: 48   TMPAQAMTQQATRHARRVYVGGLPPLANEQTIATFFSQVMSAIGGNTAGPGDAVVNVYIN 107

Query: 1006 KQKSFAIVELRSEEEAIAALELDCKLFKGTMLRIRHPSDYNRMLDPDFIPS 1158
            ++K FA VE+R+ EEA  A+ LD  +F+G  +R+R PSDYN  +     PS
Sbjct: 108  QEKKFAFVEMRTVEEASNAMALDGIIFEGVSVRVRRPSDYNPSMAATLGPS 158


>ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
            gi|300140455|gb|EFJ07178.1| hypothetical protein
            SELMODRAFT_161898 [Selaginella moellendorffii]
          Length = 420

 Score = 84.7 bits (208), Expect = 4e-14
 Identities = 48/111 (43%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
 Frame = +1

Query: 841  TVPKTTGTSQVRRHARRVYVDGFSSQTDVQAITIFFNSRISG----SRDPG-AVLHVYLN 1005
            T+P    T Q  RHARRVYV G     + Q I  FF+  +S     +  PG AV++VY+N
Sbjct: 48   TMPAQAMTQQATRHARRVYVGGLPPLANEQTIATFFSQVMSAIGGNTAGPGDAVVNVYIN 107

Query: 1006 KQKSFAIVELRSEEEAIAALELDCKLFKGTMLRIRHPSDYNRMLDPDFIPS 1158
            ++K FA VE+R+ EEA  A+ LD  +F+G  +R+R PSDYN  +     PS
Sbjct: 108  QEKKFAFVEMRTVEEASNAMALDGIIFEGVSVRVRRPSDYNPSMAATLGPS 158


>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis vinifera]
          Length = 568

 Score = 84.3 bits (207), Expect = 5e-14
 Identities = 48/110 (43%), Positives = 66/110 (60%), Gaps = 5/110 (4%)
 Frame = +1

Query: 844  VPKTTGTSQVRRHARRVYVDGFSSQTDVQAITIFFNSRISG----SRDPG-AVLHVYLNK 1008
            +P    T Q  RHARRVYV G S   + Q++  FF+  +S     +  PG AV++VY+N 
Sbjct: 220  MPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSAIGGNTAGPGDAVVNVYINH 279

Query: 1009 QKSFAIVELRSEEEAIAALELDCKLFKGTMLRIRHPSDYNRMLDPDFIPS 1158
            +K FA VE+RS EEA  A+ LD  +F+G  +++R PSDYN  L     PS
Sbjct: 280  EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPS 329