BLASTX nr result

ID: Coptis25_contig00032385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032385
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29897.3| unnamed protein product [Vitis vinifera]              135   3e-30
ref|XP_002275450.1| PREDICTED: UDP-N-acetylmuramoylalanine--D-gl...   100   2e-19
ref|XP_002960083.1| hypothetical protein SELMODRAFT_229823 [Sela...    91   1e-16
ref|XP_002984052.1| hypothetical protein SELMODRAFT_119124 [Sela...    91   1e-16
ref|XP_002984056.1| hypothetical protein SELMODRAFT_119501 [Sela...    88   6e-16

>emb|CBI29897.3| unnamed protein product [Vitis vinifera]
          Length = 479

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/89 (71%), Positives = 82/89 (92%)
 Frame = +1

Query: 16  FEKHGYLKTILGHCEREVLENADRVVVSPGVPIQNYGLSSLLQSGRRVMSELDFAAEVLP 195
           FEKHG+LKT+LGH + ++L++AD VVVSPGVP++++GLS LLQSG+RV+SELDFAAE+LP
Sbjct: 55  FEKHGHLKTVLGHFDTKLLKDADMVVVSPGVPLESHGLSFLLQSGKRVLSELDFAAEILP 114

Query: 196 KSMKILAVTGTNGKSTVTTFAGQILRQLG 282
           +S+KILAVTGTNGKSTV TF+GQ+L  LG
Sbjct: 115 RSIKILAVTGTNGKSTVATFSGQMLSHLG 143


>ref|XP_002275450.1| PREDICTED: UDP-N-acetylmuramoylalanine--D-glutamate ligase-like
           [Vitis vinifera]
          Length = 307

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/65 (70%), Positives = 60/65 (92%)
 Frame = +1

Query: 88  VVVSPGVPIQNYGLSSLLQSGRRVMSELDFAAEVLPKSMKILAVTGTNGKSTVTTFAGQI 267
           VVVSPGVP++++GLS LLQSG+R++S+LDFAAE+LP+S+KILA TGTNGKST+ TF+GQ+
Sbjct: 2   VVVSPGVPLESHGLSFLLQSGKRILSKLDFAAEILPRSIKILAATGTNGKSTIATFSGQM 61

Query: 268 LRQLG 282
           L  LG
Sbjct: 62  LSHLG 66


>ref|XP_002960083.1| hypothetical protein SELMODRAFT_229823 [Selaginella moellendorffii]
           gi|300171022|gb|EFJ37622.1| hypothetical protein
           SELMODRAFT_229823 [Selaginella moellendorffii]
          Length = 492

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 50/90 (55%), Positives = 61/90 (67%), Gaps = 4/90 (4%)
 Frame = +1

Query: 25  HGY----LKTILGHCEREVLENADRVVVSPGVPIQNYGLSSLLQSGRRVMSELDFAAEVL 192
           HGY    + T LG  + E   +A R+VVSPGVP+    L+  + SG   +SEL FAAE  
Sbjct: 64  HGYEMDRVSTELGPHQLETFLSASRIVVSPGVPLSEPILAYAMDSGIPTISELGFAAEAF 123

Query: 193 PKSMKILAVTGTNGKSTVTTFAGQILRQLG 282
           PK++KI AVTGTNGKSTVTTF GQIL+Q G
Sbjct: 124 PKAVKIAAVTGTNGKSTVTTFTGQILQQAG 153


>ref|XP_002984052.1| hypothetical protein SELMODRAFT_119124 [Selaginella moellendorffii]
           gi|300148404|gb|EFJ15064.1| hypothetical protein
           SELMODRAFT_119124 [Selaginella moellendorffii]
          Length = 492

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 50/90 (55%), Positives = 61/90 (67%), Gaps = 4/90 (4%)
 Frame = +1

Query: 25  HGY----LKTILGHCEREVLENADRVVVSPGVPIQNYGLSSLLQSGRRVMSELDFAAEVL 192
           HGY    + T LG  + E   +A R+VVSPGVP+    L+  + SG   +SEL FAAE  
Sbjct: 64  HGYEMDRVSTELGPHQLETFLSASRIVVSPGVPLSEPILAYAMDSGIPTISELGFAAEAF 123

Query: 193 PKSMKILAVTGTNGKSTVTTFAGQILRQLG 282
           PK++KI AVTGTNGKSTVTTF GQIL+Q G
Sbjct: 124 PKAVKIAAVTGTNGKSTVTTFTGQILQQAG 153


>ref|XP_002984056.1| hypothetical protein SELMODRAFT_119501 [Selaginella moellendorffii]
           gi|300148408|gb|EFJ15068.1| hypothetical protein
           SELMODRAFT_119501 [Selaginella moellendorffii]
          Length = 492

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 49/90 (54%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
 Frame = +1

Query: 25  HGY----LKTILGHCEREVLENADRVVVSPGVPIQNYGLSSLLQSGRRVMSELDFAAEVL 192
           HGY    + T LG  + E   +A R+VVSPGVP+    L+  + SG   +SEL  AAE  
Sbjct: 64  HGYEMDRVSTELGPHQLETFLSASRIVVSPGVPLSEPILAYAMDSGIPTISELGLAAEAF 123

Query: 193 PKSMKILAVTGTNGKSTVTTFAGQILRQLG 282
           PK++KI AVTGTNGKSTVTTF GQIL+Q G
Sbjct: 124 PKAVKIAAVTGTNGKSTVTTFTGQILQQAG 153


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