BLASTX nr result

ID: Coptis25_contig00032380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032380
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529221.1| leucine-rich repeat-containing protein, puta...   160   8e-38
ref|XP_002269571.2| PREDICTED: putative disease resistance prote...   103   2e-20
ref|XP_002265429.1| PREDICTED: putative disease resistance prote...   102   2e-20
ref|XP_003632256.1| PREDICTED: putative disease resistance prote...   102   3e-20
emb|CBI24355.3| unnamed protein product [Vitis vinifera]              102   3e-20

>ref|XP_002529221.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223531339|gb|EEF33177.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 386

 Score =  160 bits (406), Expect = 8e-38
 Identities = 80/119 (67%), Positives = 95/119 (79%)
 Frame = +3

Query: 3   KLKCLRVLDLSHTSISELPNSVGNLKHLRYLDLSWTRIERLPESITTLVNLQTLNLIKCX 182
           KLK LR LDLSHTSI+ELP+S+GN KHLR+LDLSWT I+ LP++I +L NLQTLNL KC 
Sbjct: 254 KLKSLRTLDLSHTSITELPSSIGNSKHLRFLDLSWTCIQILPDTICSLCNLQTLNLKKCL 313

Query: 183 XXXXXPSDMRNLVNLRHLNISYSTILLRILPFSDRRLLELPKYLRNLINLRDIDTSFSS 359
                P +M +L+NLR  N+SYST LLRILPFSDRR L+LPK +RNLINLRDID S  +
Sbjct: 314 ELRTLPDNMSSLINLRPFNVSYSTALLRILPFSDRRFLDLPKCIRNLINLRDIDISLGT 372


>ref|XP_002269571.2| PREDICTED: putative disease resistance protein At3g14460-like
           [Vitis vinifera]
          Length = 1330

 Score =  103 bits (256), Expect = 2e-20
 Identities = 61/117 (52%), Positives = 71/117 (60%)
 Frame = +3

Query: 6   LKCLRVLDLSHTSISELPNSVGNLKHLRYLDLSWTRIERLPESITTLVNLQTLNLIKCXX 185
           LKCLRVL L+H  I ELP S+G LKHLRYLDLS T I RLPESIT L NLQTL L  C  
Sbjct: 591 LKCLRVLSLAHYHIVELPRSIGTLKHLRYLDLSRTSIRRLPESITNLFNLQTLMLSNCHS 650

Query: 186 XXXXPSDMRNLVNLRHLNISYSTILLRILPFSDRRLLELPKYLRNLINLRDIDTSFS 356
               P+ M  L+NLRHL+I            SD  L E+P  +  L  LR + T+F+
Sbjct: 651 LTHLPTKMGKLINLRHLDI------------SDTSLKEMPMGMEGLKRLRTL-TAFA 694


>ref|XP_002265429.1| PREDICTED: putative disease resistance protein At3g14460 [Vitis
           vinifera]
          Length = 1322

 Score =  102 bits (255), Expect = 2e-20
 Identities = 57/99 (57%), Positives = 65/99 (65%)
 Frame = +3

Query: 6   LKCLRVLDLSHTSISELPNSVGNLKHLRYLDLSWTRIERLPESITTLVNLQTLNLIKCXX 185
           L+CLRVL LSH  I ELP+S+ NLKHLRYLDLS TRI  LPESITTL NLQTL L +C  
Sbjct: 584 LRCLRVLSLSHYDIKELPHSIENLKHLRYLDLSHTRIRTLPESITTLFNLQTLMLSECRF 643

Query: 186 XXXXPSDMRNLVNLRHLNISYSTILLRILPFSDRRLLEL 302
               P+ M  L+NLRHL I    I L  +P    R+  L
Sbjct: 644 LVDLPTKMGRLINLRHLKI--DGIKLERMPMEMSRMKNL 680


>ref|XP_003632256.1| PREDICTED: putative disease resistance protein At3g14460-like
           [Vitis vinifera]
          Length = 1357

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/99 (52%), Positives = 72/99 (72%)
 Frame = +3

Query: 6   LKCLRVLDLSHTSISELPNSVGNLKHLRYLDLSWTRIERLPESITTLVNLQTLNLIKCXX 185
           LKCLRVL LSH  I++LP+S+GNL+HLRYLD+S+T I+++ ES++TLVNLQTL L  C  
Sbjct: 583 LKCLRVLSLSHYQITDLPDSIGNLRHLRYLDISYTAIKKISESVSTLVNLQTLVLSHCYH 642

Query: 186 XXXXPSDMRNLVNLRHLNISYSTILLRILPFSDRRLLEL 302
               P +M NL+NLRHL  S ++  L+ +P   ++L  L
Sbjct: 643 MNELPKNMGNLINLRHLENSGTS--LKGMPMEMKKLKNL 679


>emb|CBI24355.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/99 (52%), Positives = 72/99 (72%)
 Frame = +3

Query: 6   LKCLRVLDLSHTSISELPNSVGNLKHLRYLDLSWTRIERLPESITTLVNLQTLNLIKCXX 185
           LKCLRVL LSH  I++LP+S+GNL+HLRYLD+S+T I+++ ES++TLVNLQTL L  C  
Sbjct: 102 LKCLRVLSLSHYQITDLPDSIGNLRHLRYLDISYTAIKKISESVSTLVNLQTLVLSHCYH 161

Query: 186 XXXXPSDMRNLVNLRHLNISYSTILLRILPFSDRRLLEL 302
               P +M NL+NLRHL  S ++  L+ +P   ++L  L
Sbjct: 162 MNELPKNMGNLINLRHLENSGTS--LKGMPMEMKKLKNL 198


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