BLASTX nr result

ID: Coptis25_contig00032379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032379
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542610.1| PREDICTED: F-box/kelch-repeat protein At1g57...   112   5e-23
ref|NP_001241212.1| uncharacterized protein LOC100809651 [Glycin...   109   5e-22
gb|AFK44646.1| unknown [Medicago truncatula]                          108   1e-21
ref|XP_003554440.1| PREDICTED: F-box/kelch-repeat protein At1g57...   108   1e-21
gb|ACU18766.1| unknown [Glycine max]                                  108   1e-21

>ref|XP_003542610.1| PREDICTED: F-box/kelch-repeat protein At1g57790-like [Glycine max]
          Length = 376

 Score =  112 bits (281), Expect = 5e-23
 Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 10/230 (4%)
 Frame = -3

Query: 670 DYINSRLVCKTWASSLPPTIRWTVNPICSATQCPWLMFSNRGSRTCSFVDLTSNATHSFD 491
           D + + +VCK W S            +C   Q PWLM+  +      F D     T+S +
Sbjct: 55  DNVRASVVCKRWHS--------VATSVCVVNQSPWLMYFPKFGDWYEFYDPVHRKTYSIE 106

Query: 490 MPELLGAQICFSSDGWLLMSKGE-YSMFFFNPFTTVTIELPDLPQXXXXXXXXXXXLPTS 314
           +PEL G+++C++ DGWLL+ +   + +FFFNPFT   I+LP                PTS
Sbjct: 107 LPELSGSRVCYTKDGWLLLYRPRTHRVFFFNPFTQEIIKLPRFEM--SYQIVAFSCAPTS 164

Query: 313 AECVVFGIIPITYNFTDVCYLRLGEKAWTWIQCDHEIRITLSYTNP-VFYDGAFYCLSQE 137
           ++CV+F +  ++     +     G   WT +   + +    S  N  VF +G FYCLS  
Sbjct: 165 SDCVLFTVKHVSPTVVAISTCYPGATEWTTVSYQNRLPFVSSIWNKLVFCNGLFYCLSLT 224

Query: 136 RHIGIFDIKDGEYYWTVLCTTPS-------CSSIWK-RYLLEDNGEILLV 11
             +G+FD    E  W+VL   P          + WK +++ E  G+I+++
Sbjct: 225 GWLGVFD--SSERTWSVLSVPPPKCPENFFAKNWWKGKFMTEHEGDIIVI 272


>ref|NP_001241212.1| uncharacterized protein LOC100809651 [Glycine max]
           gi|255641457|gb|ACU21004.1| unknown [Glycine max]
          Length = 376

 Score =  109 bits (273), Expect = 5e-22
 Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 10/230 (4%)
 Frame = -3

Query: 670 DYINSRLVCKTWASSLPPTIRWTVNPICSATQCPWLMFSNRGSRTCSFVDLTSNATHSFD 491
           D + + +VCK W S            +C   Q PWLM+  +      F D     T+S +
Sbjct: 55  DNVRASVVCKRWHS--------VATSVCVVNQSPWLMYFPKFGDWYEFYDPAHRKTYSIE 106

Query: 490 MPELLGAQICFSSDGWLLMSKGE-YSMFFFNPFTTVTIELPDLPQXXXXXXXXXXXLPTS 314
           +PEL G+++C++ DGWLL+ +   + +FFFNPFT   I+LP                PTS
Sbjct: 107 LPELRGSRVCYTKDGWLLLYRPRTHRVFFFNPFTMEIIKLPRFEM--SYQIVAFSCAPTS 164

Query: 313 AECVVFGIIPITYNFTDVCYLRLGEKAWTWIQCDHEIRITLSYTNP-VFYDGAFYCLSQE 137
            +CV+F +  ++     +     G   WT +   + +    S  N  VF +G FYCLS  
Sbjct: 165 PDCVLFTVKHVSPTVVAISTCYPGATEWTTLSYQNRLPFVSSIWNKLVFCNGLFYCLSLT 224

Query: 136 RHIGIFDIKDGEYYWTVLCTTPS-------CSSIWK-RYLLEDNGEILLV 11
             +G+F+    E  W+VL   P          + WK +++ E  G+I+++
Sbjct: 225 GWLGVFN--SSERTWSVLSVPPPKCPENFFAKNWWKGKFMTEHEGDIIVI 272


>gb|AFK44646.1| unknown [Medicago truncatula]
          Length = 376

 Score =  108 bits (270), Expect = 1e-21
 Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 10/230 (4%)
 Frame = -3

Query: 670 DYINSRLVCKTWASSLPPTIRWTVNPICSATQCPWLMFSNRGSRTCSFVDLTSNATHSFD 491
           D + +  VCK+W         +  N +    Q PWLM+  +  +   F D     T+S +
Sbjct: 55  DNVRASAVCKSW--------NFVANAVRMVNQSPWLMYFPKFGQWYEFYDPVQRKTYSIE 106

Query: 490 MPELLGAQICFSSDGWLLMSKGEYS-MFFFNPFTTVTIELPDLPQXXXXXXXXXXXLPTS 314
            PEL G+++C++ DGWLL+ +     +FFFNPFT  TI++P                PTS
Sbjct: 107 FPELNGSRVCYTKDGWLLLYRPRTDRVFFFNPFTRETIKMPRFEM--TYQIVAFSCAPTS 164

Query: 313 AECVVFGIIPITYNFTDVCYLRLGEKAWTWIQCDHEIRITLSYTNP-VFYDGAFYCLSQE 137
            +CV+F +  ++     +     G   W  +   + +    S  N  VF +G FYCLS  
Sbjct: 165 PDCVLFTVKHVSPTIVAISTCHPGATEWVTVNYQNRLPFVSSIWNKLVFCNGLFYCLSLT 224

Query: 136 RHIGIFDIKDGEYYWTVLCTTPS-------CSSIWK-RYLLEDNGEILLV 11
             +G+FD    E  W+VL   P          + WK +++ E  G+++++
Sbjct: 225 GWLGVFD--PSERTWSVLSVPPPKCPENFFAKNWWKGKFMTEQEGDVIVM 272


>ref|XP_003554440.1| PREDICTED: F-box/kelch-repeat protein At1g57790-like [Glycine max]
          Length = 376

 Score =  108 bits (270), Expect = 1e-21
 Identities = 73/240 (30%), Positives = 112/240 (46%), Gaps = 10/240 (4%)
 Frame = -3

Query: 700 SITMKLPLPGDYINSRLVCKTWASSLPPTIRWTVNPICSATQCPWLMFSNRGSRTCSFVD 521
           SI  +L L  D I +  VC+ W S          + +    Q PWLM+  +      F D
Sbjct: 46  SILSRLIL-ADNIRASAVCRRWHS--------VASDVRVVNQSPWLMYFPKFGDCYEFYD 96

Query: 520 LTSNATHSFDMPELLGAQICFSSDGWLLMSKGE-YSMFFFNPFTTVTIELPDLPQXXXXX 344
                TH+F++PEL G+++C++ DGWLL+ +   + +FFFNPFT   I+LP         
Sbjct: 97  PVQRKTHTFELPELNGSRVCYTKDGWLLLYRPRTHRVFFFNPFTRELIKLPRFEM--TYQ 154

Query: 343 XXXXXXLPTSAECVVFGIIPITYNFTDVCYLRLGEKAWTWIQCDHEIRITLSYTNP-VFY 167
                  PTS  CV+F +  ++     +     G   WT +   + +    S  N  VF 
Sbjct: 155 IVAFSCAPTSPGCVLFTVKHVSPTVVAISTCYPGATEWTTVNYQNRLPFVSSIWNKLVFC 214

Query: 166 DGAFYCLSQERHIGIFDIKDGEYYWTVLCTTPS-------CSSIWK-RYLLEDNGEILLV 11
           +G FYCLS    +G+FD    E  W+VL   P          + WK +++ E  G+IL++
Sbjct: 215 NGLFYCLSLTGWLGVFD--PVECTWSVLAVPPPKCPENFFAKNWWKGKFMTEHEGDILVI 272


>gb|ACU18766.1| unknown [Glycine max]
          Length = 376

 Score =  108 bits (270), Expect = 1e-21
 Identities = 73/240 (30%), Positives = 112/240 (46%), Gaps = 10/240 (4%)
 Frame = -3

Query: 700 SITMKLPLPGDYINSRLVCKTWASSLPPTIRWTVNPICSATQCPWLMFSNRGSRTCSFVD 521
           SI  +L L  D I +  VC+ W S          + +    Q PWLM+  +      F D
Sbjct: 46  SILSRLIL-ADNIRASAVCRRWHS--------VASDVRVVNQSPWLMYFPKFGDCYEFYD 96

Query: 520 LTSNATHSFDMPELLGAQICFSSDGWLLMSKGE-YSMFFFNPFTTVTIELPDLPQXXXXX 344
                TH+F++PEL G+++C++ DGWLL+ +   + +FFFNPFT   I+LP         
Sbjct: 97  PVQRKTHTFELPELNGSRVCYTKDGWLLLYRPRTHRVFFFNPFTRELIKLPRFEM--IYQ 154

Query: 343 XXXXXXLPTSAECVVFGIIPITYNFTDVCYLRLGEKAWTWIQCDHEIRITLSYTNP-VFY 167
                  PTS  CV+F +  ++     +     G   WT +   + +    S  N  VF 
Sbjct: 155 IVAFSCAPTSPGCVLFTVKHVSPTVVAISTCYPGATEWTTVNYQNRLPFVSSIWNKLVFC 214

Query: 166 DGAFYCLSQERHIGIFDIKDGEYYWTVLCTTPS-------CSSIWK-RYLLEDNGEILLV 11
           +G FYCLS    +G+FD    E  W+VL   P          + WK +++ E  G+IL++
Sbjct: 215 NGLFYCLSLTGWLGVFD--PVECTWSVLAVPPPKCPENFFAKNWWKGKFMTEHEGDILVI 272


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