BLASTX nr result

ID: Coptis25_contig00032374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032374
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB72466.1| putative protein [Arabidopsis thaliana]               101   7e-20
ref|XP_003548771.1| PREDICTED: uncharacterized protein LOC100781...    99   4e-19
ref|XP_003516389.1| PREDICTED: uncharacterized protein LOC100780...    99   4e-19
gb|AEJ07903.1| putative PIFa transposase [Zea mays subsp. mexicana]    99   5e-19
ref|XP_003556924.1| PREDICTED: putative nuclease HARBI1-like [Gl...    99   5e-19

>emb|CAB72466.1| putative protein [Arabidopsis thaliana]
          Length = 377

 Score =  101 bits (251), Expect = 7e-20
 Identities = 44/87 (50%), Positives = 59/87 (67%)
 Frame = -2

Query: 271 DVVGAVDGTHFPINLPLAQQARYRNRKGVVTQNVLVACTFDMRFTYVLVRWEGSTHDGRL 92
           D +GA+DGTH    +P    A +RNRKG ++QNVL AC FD++F Y+L  W+GS HD ++
Sbjct: 145 DCIGAIDGTHIFAMVPTCDAASFRNRKGFISQNVLAACNFDLQFIYILSGWKGSAHDSKV 204

Query: 91  LRSDVARPGNKLTVPNGKYYLVDAGSA 11
           L   + R  N+L VP GK+YLVD G A
Sbjct: 205 LNDALTRNTNRLQVPEGKFYLVDCGYA 231


>ref|XP_003548771.1| PREDICTED: uncharacterized protein LOC100781080 [Glycine max]
          Length = 454

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/83 (57%), Positives = 61/83 (73%)
 Frame = -2

Query: 265 VGAVDGTHFPINLPLAQQARYRNRKGVVTQNVLVACTFDMRFTYVLVRWEGSTHDGRLLR 86
           +GA+DGTH P+ +   +++RYRNRKG V++NVL AC  D+RF YVL  WEGS  D R+LR
Sbjct: 178 IGALDGTHIPVIVSPDERSRYRNRKGDVSKNVLAACGPDLRFIYVLPGWEGSAGDSRVLR 237

Query: 85  SDVARPGNKLTVPNGKYYLVDAG 17
            D  R  NKL +P GKY+LVDAG
Sbjct: 238 -DALRRQNKLEIPTGKYFLVDAG 259


>ref|XP_003516389.1| PREDICTED: uncharacterized protein LOC100780713 [Glycine max]
          Length = 450

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/83 (57%), Positives = 59/83 (71%)
 Frame = -2

Query: 265 VGAVDGTHFPINLPLAQQARYRNRKGVVTQNVLVACTFDMRFTYVLVRWEGSTHDGRLLR 86
           +GA+DGTH P+ +   ++ RYRNRKG V+ NVL AC  D+RF YVL  WEGS  D R+LR
Sbjct: 150 IGALDGTHIPVTISPDERPRYRNRKGDVSTNVLAACGPDLRFIYVLPGWEGSAGDSRVLR 209

Query: 85  SDVARPGNKLTVPNGKYYLVDAG 17
            D  R  NKL +P GKY+LVDAG
Sbjct: 210 -DALRRQNKLEIPTGKYFLVDAG 231


>gb|AEJ07903.1| putative PIFa transposase [Zea mays subsp. mexicana]
          Length = 558

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/85 (55%), Positives = 58/85 (68%)
 Frame = -2

Query: 271 DVVGAVDGTHFPINLPLAQQARYRNRKGVVTQNVLVACTFDMRFTYVLVRWEGSTHDGRL 92
           D +GA+DGTH  +N+PL  Q RYRNRK  +T NVL  C   M+F YVL  WEGS  D R+
Sbjct: 147 DCLGALDGTHIDVNVPLTDQGRYRNRKQRITTNVLGVCDRQMKFLYVLAGWEGSASDSRI 206

Query: 91  LRSDVARPGNKLTVPNGKYYLVDAG 17
           LR  ++R  +   VP+GKYYLVDAG
Sbjct: 207 LRDAMSRE-DSFVVPSGKYYLVDAG 230


>ref|XP_003556924.1| PREDICTED: putative nuclease HARBI1-like [Glycine max]
          Length = 308

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/83 (57%), Positives = 59/83 (71%)
 Frame = -2

Query: 265 VGAVDGTHFPINLPLAQQARYRNRKGVVTQNVLVACTFDMRFTYVLVRWEGSTHDGRLLR 86
           +GA+DGTH P+ +   ++ RYRNRKG V+ NVL AC  D+RF YVL  WEGS  D R+LR
Sbjct: 178 IGALDGTHIPVTVSPDERPRYRNRKGDVSTNVLAACGPDLRFIYVLPGWEGSAGDSRVLR 237

Query: 85  SDVARPGNKLTVPNGKYYLVDAG 17
            D  R  NKL +P GKY+LVDAG
Sbjct: 238 -DALRRQNKLEIPTGKYFLVDAG 259


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