BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032368
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889710.1| hypothetical protein ARALYDRAFT_311923 [Arab...    63   3e-08
gb|AAF99761.1|AC003981_11 F22O13.19 [Arabidopsis thaliana]             62   6e-08
ref|NP_001077493.1| F-box protein SKIP24 [Arabidopsis thaliana] ...    62   6e-08
ref|NP_172347.2| F-box protein SKIP24 [Arabidopsis thaliana] gi|...    62   6e-08
ref|XP_003624776.1| F-box protein SKIP24 [Medicago truncatula] g...    60   2e-07

>ref|XP_002889710.1| hypothetical protein ARALYDRAFT_311923 [Arabidopsis lyrata subsp.
           lyrata] gi|297335552|gb|EFH65969.1| hypothetical protein
           ARALYDRAFT_311923 [Arabidopsis lyrata subsp. lyrata]
          Length = 294

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/66 (43%), Positives = 41/66 (62%)
 Frame = +3

Query: 105 MEAVELPDQIWTKILELGINKWILNHPDICSFSMSCKHFNNLSNQNTLWDSLLTLVFPDH 284
           M A E+PD+IW KI+E+G+     ++ D+C  S+S +    LS  ++LWD LL L FP H
Sbjct: 1   MSANEIPDEIWRKIMEIGVKSSTFSYKDLCCISISSRRLCRLSCDDSLWDLLLFLDFPTH 60

Query: 285 TSSLSS 302
             S SS
Sbjct: 61  IVSASS 66


>gb|AAF99761.1|AC003981_11 F22O13.19 [Arabidopsis thaliana]
          Length = 313

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/66 (42%), Positives = 41/66 (62%)
 Frame = +3

Query: 105 MEAVELPDQIWTKILELGINKWILNHPDICSFSMSCKHFNNLSNQNTLWDSLLTLVFPDH 284
           M A E+PD++W KILE+G+     ++ D+C  S+S +    LS  ++LWD LL   FP+H
Sbjct: 1   MSANEIPDELWRKILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNH 60

Query: 285 TSSLSS 302
             S SS
Sbjct: 61  IVSASS 66


>ref|NP_001077493.1| F-box protein SKIP24 [Arabidopsis thaliana]
           gi|238055474|sp|Q9CAZ0.2|SKI24_ARATH RecName: Full=F-box
           protein SKIP24; AltName: Full=SKP1-interacting partner
           24 gi|332190217|gb|AEE28338.1| F-box protein SKIP24
           [Arabidopsis thaliana]
          Length = 295

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/66 (42%), Positives = 41/66 (62%)
 Frame = +3

Query: 105 MEAVELPDQIWTKILELGINKWILNHPDICSFSMSCKHFNNLSNQNTLWDSLLTLVFPDH 284
           M A E+PD++W KILE+G+     ++ D+C  S+S +    LS  ++LWD LL   FP+H
Sbjct: 1   MSANEIPDELWRKILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNH 60

Query: 285 TSSLSS 302
             S SS
Sbjct: 61  IVSASS 66


>ref|NP_172347.2| F-box protein SKIP24 [Arabidopsis thaliana]
           gi|17529082|gb|AAL38751.1| unknown protein [Arabidopsis
           thaliana] gi|22136746|gb|AAM91692.1| unknown protein
           [Arabidopsis thaliana] gi|332190216|gb|AEE28337.1| F-box
           protein SKIP24 [Arabidopsis thaliana]
          Length = 274

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/66 (42%), Positives = 41/66 (62%)
 Frame = +3

Query: 105 MEAVELPDQIWTKILELGINKWILNHPDICSFSMSCKHFNNLSNQNTLWDSLLTLVFPDH 284
           M A E+PD++W KILE+G+     ++ D+C  S+S +    LS  ++LWD LL   FP+H
Sbjct: 1   MSANEIPDELWRKILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNH 60

Query: 285 TSSLSS 302
             S SS
Sbjct: 61  IVSASS 66


>ref|XP_003624776.1| F-box protein SKIP24 [Medicago truncatula]
           gi|355499791|gb|AES80994.1| F-box protein SKIP24
           [Medicago truncatula]
          Length = 269

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/61 (44%), Positives = 43/61 (70%)
 Frame = +3

Query: 120 LPDQIWTKILELGINKWILNHPDICSFSMSCKHFNNLSNQNTLWDSLLTLVFPDHTSSLS 299
           LP ++WTKILE+GI    L++ D+C  S+SC+  + LS +++LW+ LL+  FP  ++S S
Sbjct: 4   LPIELWTKILEIGIQDCGLSYKDLCCISISCRLLHRLSVEDSLWNRLLSSDFPSSSTSSS 63

Query: 300 S 302
           S
Sbjct: 64  S 64