BLASTX nr result

ID: Coptis25_contig00032364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032364
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530159.1| conserved hypothetical protein [Ricinus comm...   124   2e-26
ref|XP_003520709.1| PREDICTED: uncharacterized protein LOC100804...   122   7e-26
ref|XP_002308445.1| predicted protein [Populus trichocarpa] gi|2...   120   3e-25
ref|XP_003519129.1| PREDICTED: uncharacterized protein LOC100818...   120   3e-25
ref|XP_003535805.1| PREDICTED: uncharacterized protein LOC100786...   118   1e-24

>ref|XP_002530159.1| conserved hypothetical protein [Ricinus communis]
           gi|223530320|gb|EEF32214.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 209

 Score =  124 bits (311), Expect = 2e-26
 Identities = 59/75 (78%), Positives = 67/75 (89%)
 Frame = +1

Query: 391 GESVAVVKDSHDPYLDFRHSMLQMILEKEIYSKEELKELLDCFLSLNSPYHHEIILRAFS 570
           GESVAV KDS DPYLDFRHSMLQMILEKEIYSK++LKELL+CFL LNSPYHH II+RAF+
Sbjct: 111 GESVAVEKDSDDPYLDFRHSMLQMILEKEIYSKDDLKELLNCFLQLNSPYHHGIIVRAFT 170

Query: 571 EIWNGVFFSLATSQN 615
           EIWNGV+   ++S N
Sbjct: 171 EIWNGVYSVKSSSYN 185


>ref|XP_003520709.1| PREDICTED: uncharacterized protein LOC100804319 [Glycine max]
          Length = 158

 Score =  122 bits (307), Expect = 7e-26
 Identities = 67/142 (47%), Positives = 83/142 (58%), Gaps = 1/142 (0%)
 Frame = +1

Query: 169 TVAVDIGC-SCGKPKLSNLFFPKLKTKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 345
           TV+V +GC +C +P L  +F PK K K                                 
Sbjct: 12  TVSVKLGCGTCRRPSLRRIFHPKPKPK----------NLNNNTNYRKHKHSSSSSASSSF 61

Query: 346 XXXXYASKSSSTSRVGESVAVVKDSHDPYLDFRHSMLQMILEKEIYSKEELKELLDCFLS 525
               +   S+S +    SVAV KDS DPYLDFRHSMLQMILE EIYSK++L+ELL+CFL 
Sbjct: 62  FASQWGGDSTSATPTNTSVAVEKDSDDPYLDFRHSMLQMILENEIYSKQDLRELLNCFLQ 121

Query: 526 LNSPYHHEIILRAFSEIWNGVF 591
           LNSP+HH +I+RAF+EIWNGVF
Sbjct: 122 LNSPHHHGVIVRAFTEIWNGVF 143


>ref|XP_002308445.1| predicted protein [Populus trichocarpa] gi|222854421|gb|EEE91968.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  120 bits (302), Expect = 3e-25
 Identities = 55/67 (82%), Positives = 63/67 (94%)
 Frame = +1

Query: 391 GESVAVVKDSHDPYLDFRHSMLQMILEKEIYSKEELKELLDCFLSLNSPYHHEIILRAFS 570
           GESVAV KDS DPYLDFRHSMLQMILEKEIYSK++L++LLDCFL LNSPY+H +I+RAF+
Sbjct: 29  GESVAVEKDSDDPYLDFRHSMLQMILEKEIYSKDDLRQLLDCFLQLNSPYYHGVIIRAFT 88

Query: 571 EIWNGVF 591
           EIWNGVF
Sbjct: 89  EIWNGVF 95


>ref|XP_003519129.1| PREDICTED: uncharacterized protein LOC100818531 [Glycine max]
          Length = 169

 Score =  120 bits (301), Expect = 3e-25
 Identities = 69/143 (48%), Positives = 83/143 (58%), Gaps = 2/143 (1%)
 Frame = +1

Query: 169 TVAVDIGC-SCGKPKL-SNLFFPKLKTKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 342
           TV+V +GC SC +P L  ++F PK + K                                
Sbjct: 12  TVSVSLGCGSCRRPGLLRHIFHPKRRPKKPAYQAHGFHWDDTATSSSTTNASTAATFSPC 71

Query: 343 XXXXXYASKSSSTSRVGESVAVVKDSHDPYLDFRHSMLQMILEKEIYSKEELKELLDCFL 522
                YA  S+  S  G  VAV KDS DPYLDFRHSMLQMILE EIYSK++L+ELL+CFL
Sbjct: 72  -----YAEASAQFSNYGRGVAVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFL 126

Query: 523 SLNSPYHHEIILRAFSEIWNGVF 591
            LNSP HH +I+RAF+EIWNGVF
Sbjct: 127 QLNSPDHHGVIVRAFTEIWNGVF 149


>ref|XP_003535805.1| PREDICTED: uncharacterized protein LOC100786450 [Glycine max]
          Length = 177

 Score =  118 bits (296), Expect = 1e-24
 Identities = 67/145 (46%), Positives = 84/145 (57%), Gaps = 4/145 (2%)
 Frame = +1

Query: 169 TVAVDIGC-SCGKPKL-SNLFFPKLKTK--AXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 336
           TV+V +GC SC +P+L  ++F PK + K  A                             
Sbjct: 12  TVSVSLGCGSCRRPRLLRHIFHPKQRPKKPAGQVHGLHWDDTTTSSTTTNASTAATFSPC 71

Query: 337 XXXXXXXYASKSSSTSRVGESVAVVKDSHDPYLDFRHSMLQMILEKEIYSKEELKELLDC 516
                  ++  + +    G  VAV KDS DPYLDFRHSMLQMILE EIYSKE+L+ELL+C
Sbjct: 72  YAEASAQFSDFAETAKAFGRGVAVEKDSDDPYLDFRHSMLQMILENEIYSKEDLRELLNC 131

Query: 517 FLSLNSPYHHEIILRAFSEIWNGVF 591
           FL LNSP HH +I+RAF+EIWNGVF
Sbjct: 132 FLQLNSPDHHGVIVRAFTEIWNGVF 156


Top