BLASTX nr result

ID: Coptis25_contig00032340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032340
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280971.2| PREDICTED: uncharacterized protein LOC100268...   155   8e-36
ref|XP_002531180.1| hypothetical protein RCOM_0012650 [Ricinus c...   150   4e-34
gb|ABK96495.1| unknown [Populus trichocarpa x Populus deltoides]      147   3e-33
ref|XP_002527786.1| hypothetical protein RCOM_0629030 [Ricinus c...   144   2e-32
emb|CBI26867.3| unnamed protein product [Vitis vinifera]              142   1e-31

>ref|XP_002280971.2| PREDICTED: uncharacterized protein LOC100268019 [Vitis vinifera]
          Length = 1055

 Score =  155 bits (392), Expect = 8e-36
 Identities = 81/159 (50%), Positives = 95/159 (59%), Gaps = 6/159 (3%)
 Frame = +1

Query: 130 MEANKFATMLHRNTNKISIILIYAVXXXXXXXXXXXXXXXXXXXTRFARYFGLKTPCLWC 309
           M ANKFATMLHRNTNKI++ILIYAV                    +FA YFGLK PCLWC
Sbjct: 1   MAANKFATMLHRNTNKITLILIYAVLEWILIVLLLLNSLFSYLIVKFADYFGLKRPCLWC 60

Query: 310 SRIDHCFGPENSKNCYQDLVCEIHASEISQLGYCSQHKKLAKSQRMCNDCSLAQ--SYCP 483
           SR+DH F PE  K  Y+ LVCE HA+EIS+LGYCS H+KLA+ Q MC DCS +    YC 
Sbjct: 61  SRLDHIFEPEKGKTSYRGLVCETHAAEISKLGYCSNHRKLAELQDMCEDCSSSSRPDYCE 120

Query: 484 QSSDHNEENITFPSGVV----EKKTENNDANSKCSCCGV 588
            S            G++    EK  EN + N +CSCC V
Sbjct: 121 LSKKIAFIPWVKQIGMIQSDGEKIVENGEVNLRCSCCDV 159


>ref|XP_002531180.1| hypothetical protein RCOM_0012650 [Ricinus communis]
           gi|223529221|gb|EEF31195.1| hypothetical protein
           RCOM_0012650 [Ricinus communis]
          Length = 520

 Score =  150 bits (378), Expect = 4e-34
 Identities = 79/161 (49%), Positives = 97/161 (60%), Gaps = 10/161 (6%)
 Frame = +1

Query: 130 MEANKFATMLHRNTNKISIILIYAVXXXXXXXXXXXXXXXXXXXTRFARYFGLKTPCLWC 309
           M  NKFATML RNT+K+++IL+YAV                   T+FA YFGLK PCLWC
Sbjct: 1   MAGNKFATMLQRNTHKLTVILVYAVLEWILIILLLLNSFFAYLITKFANYFGLKPPCLWC 60

Query: 310 SRIDHCFGPENSK--NCYQDLVCEIHASEISQLGYCSQHKKLAKSQRMCNDCSLAQSYCP 483
           SR+DH   P NS   N Y+DLVCE HA+EIS+LGYCS H++LA++Q MCNDC        
Sbjct: 61  SRVDHVLEPGNSNTNNSYRDLVCETHATEISKLGYCSNHRRLAETQNMCNDC-----LAS 115

Query: 484 QSSDHNE-------ENITFPSGVVEKKT-ENNDANSKCSCC 582
           + +DHN+         I F S V  + T EN D   KCSCC
Sbjct: 116 RPNDHNDYESVGMTRRIAFISWVSCRDTLENGDKMVKCSCC 156


>gb|ABK96495.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 264

 Score =  147 bits (370), Expect = 3e-33
 Identities = 78/165 (47%), Positives = 96/165 (58%), Gaps = 12/165 (7%)
 Frame = +1

Query: 130 MEANKFATMLHRNTNKISIILIYAVXXXXXXXXXXXXXXXXXXXTRFARYFGLKTPCLWC 309
           M  NKFAT+L RNTNKI++IL+YA+                    +FA YFGLK PCLWC
Sbjct: 1   MAGNKFATVLQRNTNKITLILVYAILEWILIILLLLNSLFSYLIIKFADYFGLKRPCLWC 60

Query: 310 SRIDHCFGPENSKNCYQDLVCEIHASEISQLGYCSQHKKLAKSQRMCNDCSLAQSYCPQS 489
           SR+DH F P N +N Y+ LVC+ HA EIS+LGYCS H+KLA+SQ MC  CS        S
Sbjct: 61  SRLDHFFEPANFQNSYRSLVCDDHAKEISKLGYCSSHRKLAESQDMCEGCS--------S 112

Query: 490 SDHNEENITF-------PSGVV-----EKKTENNDANSKCSCCGV 588
           S H E    F         GV+     +K +EN + + KCSCCGV
Sbjct: 113 SSHGESLSKFAFFPWMTQLGVLQDLGGDKVSENGEEDLKCSCCGV 157


>ref|XP_002527786.1| hypothetical protein RCOM_0629030 [Ricinus communis]
           gi|223532821|gb|EEF34596.1| hypothetical protein
           RCOM_0629030 [Ricinus communis]
          Length = 1014

 Score =  144 bits (363), Expect = 2e-32
 Identities = 77/163 (47%), Positives = 99/163 (60%), Gaps = 10/163 (6%)
 Frame = +1

Query: 130 MEANKFATMLHRNTNKISIILIYAVXXXXXXXXXXXXXXXXXXXTRFARYFGLKTPCLWC 309
           M ANKFATMLH+NTNK+++IL+YA+                    +FA YFGLK PCLWC
Sbjct: 1   MAANKFATMLHKNTNKLTLILVYAMLEWVLIILLLLNSLFSYLIIKFADYFGLKRPCLWC 60

Query: 310 SRIDHCFGPENSKNCYQDLVCEIHASEISQLGYCSQHKKLAKSQRMCNDCSLAQSYCPQS 489
           SR+DH F P   +N Y+ L+CE HA EIS+L YCS H+KL +SQ MC DC  + S  PQ 
Sbjct: 61  SRLDHFFEPSKFQNSYRSLICETHALEISKLSYCSSHRKLTESQDMCEDCLSSSS--PQ- 117

Query: 490 SDHNEENITFP----SGVV------EKKTENNDANSKCSCCGV 588
           S+ +++   FP     GV+      +K  EN +  S CSCCGV
Sbjct: 118 SELSKKFAFFPWIKKLGVLQDCCAGDKVCENVEIISNCSCCGV 160


>emb|CBI26867.3| unnamed protein product [Vitis vinifera]
          Length = 908

 Score =  142 bits (357), Expect = 1e-31
 Identities = 67/111 (60%), Positives = 76/111 (68%)
 Frame = +1

Query: 130 MEANKFATMLHRNTNKISIILIYAVXXXXXXXXXXXXXXXXXXXTRFARYFGLKTPCLWC 309
           M ANKFATMLHRNTNKI++ILIYAV                    +FA YFGLK PCLWC
Sbjct: 1   MAANKFATMLHRNTNKITLILIYAVLEWILIVLLLLNSLFSYLIVKFADYFGLKRPCLWC 60

Query: 310 SRIDHCFGPENSKNCYQDLVCEIHASEISQLGYCSQHKKLAKSQRMCNDCS 462
           SR+DH F PE  K  Y+ LVCE HA+EIS+LGYCS H+KLA+ Q MC DCS
Sbjct: 61  SRLDHIFEPEKGKTSYRGLVCETHAAEISKLGYCSNHRKLAELQDMCEDCS 111


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