BLASTX nr result

ID: Coptis25_contig00032339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032339
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269642.2| PREDICTED: putative receptor-like protein ki...   152   3e-35
ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|2...   151   5e-35
ref|XP_002331306.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
ref|XP_002331324.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
ref|XP_002512884.1| serine-threonine protein kinase, plant-type,...   147   9e-34

>ref|XP_002269642.2| PREDICTED: putative receptor-like protein kinase At3g47110-like
            [Vitis vinifera]
          Length = 1372

 Score =  152 bits (384), Expect = 3e-35
 Identities = 79/131 (60%), Positives = 102/131 (77%)
 Frame = +3

Query: 18   VYWRKRHKPVIPSSNLFLESIEYPGHRLKSVSYNELWQATNGFSSENLIGIGSYGSVYKG 197
            V + +R K  + SS+  L      G+    VSYNEL +AT GF+S NLIG+GS+GSVYKG
Sbjct: 992  VLFYRRKKTTMKSSSTSL------GYGYLRVSYNELLKATCGFASSNLIGMGSFGSVYKG 1045

Query: 198  VLRQDESPIAVKVLNLMEHGATKSFMAECEVLRRVRHRNLLKIITVCSSLDSKGNEFKAL 377
            VL Q +  +AVKVLNL +HGA+KSFMAEC+VLR++RHRNLL IIT CSS+D+KG++FKAL
Sbjct: 1046 VLSQGKRLVAVKVLNLQQHGASKSFMAECKVLRQIRHRNLLGIITSCSSVDNKGSDFKAL 1105

Query: 378  VFEFMSNGSVE 410
            VFEFM NG+++
Sbjct: 1106 VFEFMPNGNLD 1116


>ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|222860074|gb|EEE97621.1|
            predicted protein [Populus trichocarpa]
          Length = 1017

 Score =  151 bits (382), Expect = 5e-35
 Identities = 80/133 (60%), Positives = 98/133 (73%)
 Frame = +3

Query: 12   FVVYWRKRHKPVIPSSNLFLESIEYPGHRLKSVSYNELWQATNGFSSENLIGIGSYGSVY 191
            FV+ +  R K    SS L L+        L  VSY  L +ATNGFSS+NLIG G +GSVY
Sbjct: 672  FVLLYLSRRKRKEQSSELSLKE------PLPKVSYEMLLKATNGFSSDNLIGEGGFGSVY 725

Query: 192  KGVLRQDESPIAVKVLNLMEHGATKSFMAECEVLRRVRHRNLLKIITVCSSLDSKGNEFK 371
            +G+L QD++ +A+KVLNL   GA+KSF+AECE LR VRHRNLLKIIT CSS+D +GNEFK
Sbjct: 726  RGILDQDDTVVAIKVLNLQTRGASKSFVAECEALRNVRHRNLLKIITSCSSVDFQGNEFK 785

Query: 372  ALVFEFMSNGSVE 410
            ALV+EFM NGS+E
Sbjct: 786  ALVYEFMPNGSLE 798


>ref|XP_002331306.1| predicted protein [Populus trichocarpa] gi|222873889|gb|EEF11020.1|
            predicted protein [Populus trichocarpa]
          Length = 1021

 Score =  148 bits (373), Expect = 5e-34
 Identities = 70/107 (65%), Positives = 89/107 (83%)
 Frame = +3

Query: 93   HRLKSVSYNELWQATNGFSSENLIGIGSYGSVYKGVLRQDESPIAVKVLNLMEHGATKSF 272
            + L  VSY  L +ATNGFSS NL+GIGS+GSVYKG+L Q+   IAVKVLNLM  GA++SF
Sbjct: 682  NELLEVSYQILLKATNGFSSSNLVGIGSFGSVYKGMLDQNGMVIAVKVLNLMRQGASRSF 741

Query: 273  MAECEVLRRVRHRNLLKIITVCSSLDSKGNEFKALVFEFMSNGSVED 413
            +AECE LR +RHRNL+K++T CSS+D  GN+FKA+V+EFM+NGS+ED
Sbjct: 742  IAECEALRNIRHRNLVKVLTACSSIDYHGNDFKAIVYEFMANGSLED 788


>ref|XP_002331324.1| predicted protein [Populus trichocarpa] gi|222873907|gb|EEF11038.1|
           predicted protein [Populus trichocarpa]
          Length = 768

 Score =  147 bits (372), Expect = 7e-34
 Identities = 77/134 (57%), Positives = 95/134 (70%)
 Frame = +3

Query: 9   LFVVYWRKRHKPVIPSSNLFLESIEYPGHRLKSVSYNELWQATNGFSSENLIGIGSYGSV 188
           LF+ + RK+ +   PSS+         G+ L  VSY  L +ATNGFSS NLIG GS+GSV
Sbjct: 429 LFLFWSRKKRREFTPSSD---------GNVLLKVSYQSLLKATNGFSSINLIGTGSFGSV 479

Query: 189 YKGVLRQDESPIAVKVLNLMEHGATKSFMAECEVLRRVRHRNLLKIITVCSSLDSKGNEF 368
           YKG L  +   +AVKVLNL   GA+KSFMAECE LR VRHRNL+K++T CS +D  GN+F
Sbjct: 480 YKGTLDHNGIAVAVKVLNLTRQGASKSFMAECEALRNVRHRNLVKVVTACSGVDYHGNDF 539

Query: 369 KALVFEFMSNGSVE 410
           KALV+EFM NGS+E
Sbjct: 540 KALVYEFMVNGSLE 553


>ref|XP_002512884.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223547895|gb|EEF49387.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 600

 Score =  147 bits (371), Expect = 9e-34
 Identities = 71/102 (69%), Positives = 85/102 (83%)
 Frame = +3

Query: 108 VSYNELWQATNGFSSENLIGIGSYGSVYKGVLRQDESPIAVKVLNLMEHGATKSFMAECE 287
           VSY++L  ATNGFSS NLIG GS+GSVYKG + Q ESP+A+KVL L + GA+KSFMAEC 
Sbjct: 261 VSYHDLHLATNGFSSVNLIGSGSFGSVYKGFINQMESPVAIKVLKLQQKGASKSFMAECN 320

Query: 288 VLRRVRHRNLLKIITVCSSLDSKGNEFKALVFEFMSNGSVED 413
            LR VRHRNL+K++T CSSLD K NEFKAL+FEFM NGS+E+
Sbjct: 321 ALRNVRHRNLVKLLTYCSSLDYKQNEFKALIFEFMENGSLEN 362


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