BLASTX nr result

ID: Coptis25_contig00032317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032317
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160609.1| PREDICTED: 26S proteasome non-ATPase regulat...    72   5e-11
ref|XP_004141249.1| PREDICTED: 26S proteasome non-ATPase regulat...    72   6e-11
gb|AAM64349.1| 26S proteasome non-ATPase regulatory subunit [Ara...    72   6e-11
emb|CBI19542.3| unnamed protein product [Vitis vinifera]               72   6e-11
ref|XP_002510253.1| 26S proteasome non-ATPase regulatory subunit...    72   6e-11

>ref|XP_004160609.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 14-like
           [Cucumis sativus]
          Length = 309

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/52 (69%), Positives = 42/52 (80%)
 Frame = -3

Query: 431 LNRHYYSINIISGRMN*FEGKMLLNLHRKKWTNGLTLWRFDTYAKINKQAVQ 276
           LNRHYYSI  I+ R N  E KMLLNLH+KKWT+GLTL RFDT++K N+Q VQ
Sbjct: 196 LNRHYYSI-AINYRKNELEEKMLLNLHKKKWTDGLTLQRFDTHSKTNEQTVQ 246


>ref|XP_004141249.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 14-like
           [Cucumis sativus] gi|449498695|ref|XP_004160608.1|
           PREDICTED: 26S proteasome non-ATPase regulatory subunit
           14-like [Cucumis sativus]
          Length = 309

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/52 (69%), Positives = 42/52 (80%)
 Frame = -3

Query: 431 LNRHYYSINIISGRMN*FEGKMLLNLHRKKWTNGLTLWRFDTYAKINKQAVQ 276
           LNRHYYSI  I+ R N  E KMLLNLH+KKWT+GLTL RFDT++K N+Q VQ
Sbjct: 196 LNRHYYSI-AINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKTNEQTVQ 246


>gb|AAM64349.1| 26S proteasome non-ATPase regulatory subunit [Arabidopsis thaliana]
          Length = 308

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/52 (69%), Positives = 42/52 (80%)
 Frame = -3

Query: 431 LNRHYYSINIISGRMN*FEGKMLLNLHRKKWTNGLTLWRFDTYAKINKQAVQ 276
           LNRHYYSI  I+ R N  E KMLLNLH+KKWT+GLTL RFDT++K N+Q VQ
Sbjct: 195 LNRHYYSI-AINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKTNEQTVQ 245


>emb|CBI19542.3| unnamed protein product [Vitis vinifera]
          Length = 303

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/52 (69%), Positives = 42/52 (80%)
 Frame = -3

Query: 431 LNRHYYSINIISGRMN*FEGKMLLNLHRKKWTNGLTLWRFDTYAKINKQAVQ 276
           LNRHYYSI  I+ R N  E KMLLNLH+KKWT+GLTL RFDT++K N+Q VQ
Sbjct: 190 LNRHYYSI-AINYRKNELEEKMLLNLHKKKWTDGLTLKRFDTHSKTNEQTVQ 240


>ref|XP_002510253.1| 26S proteasome non-ATPase regulatory subunit, putative [Ricinus
           communis] gi|223550954|gb|EEF52440.1| 26S proteasome
           non-ATPase regulatory subunit, putative [Ricinus
           communis]
          Length = 312

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/52 (69%), Positives = 42/52 (80%)
 Frame = -3

Query: 431 LNRHYYSINIISGRMN*FEGKMLLNLHRKKWTNGLTLWRFDTYAKINKQAVQ 276
           LNRHYYSI  I+ R N  E KMLLNLH+KKWT+GLTL RFDT++K N+Q VQ
Sbjct: 199 LNRHYYSI-AINYRKNELEEKMLLNLHKKKWTDGLTLKRFDTHSKTNEQTVQ 249


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