BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032314
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514271.1| F-box and wd40 domain protein, putative [Ric...   101   7e-20
ref|XP_004155724.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ...   100   2e-19
ref|XP_004142566.1| PREDICTED: putative E3 ubiquitin-protein lig...   100   2e-19
emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera]    94   9e-18
ref|XP_002325007.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16

>ref|XP_002514271.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223546727|gb|EEF48225.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 1268

 Score =  101 bits (251), Expect = 7e-20
 Identities = 57/124 (45%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
 Frame = +1

Query: 1   ILDHTSTFIDEVLSNSDLRSSLFSTLKQKIHPDQ--IIFKPLNVATETIENAIXXXXXXX 174
           IL   S+F+ E LS  DLR  LFS L+    P       KPLN+A ET+E A+       
Sbjct: 10  ILHQISSFLSEALSQPDLRRHLFSILRNGTSPSNKTTSVKPLNLALETLEKALSATNPFV 69

Query: 175 XXXXXXXXXXXXXXYPESASSSFLLSLIYGLGQKTINAAISLLEVFYFDPLLARSEVAPI 354
                         YPE+  SSFLLSL+Y L Q+  NA+ISLL +FY DPLLARSE+AP+
Sbjct: 70  QSSSLRLAESLLLSYPETPFSSFLLSLLYSLTQQPTNASISLLNIFYLDPLLARSEIAPL 129

Query: 355 IFED 366
           IF++
Sbjct: 130 IFQE 133


>ref|XP_004155724.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ubiquitin-protein
           ligase LIN-2-like [Cucumis sativus]
          Length = 1230

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 57/123 (46%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
 Frame = +1

Query: 1   ILDHTSTFIDEVLSNSDLRSSLFSTLKQKIH-PDQIIFKPLNVATETIENAIXXXXXXXX 177
           IL H STFI E+L  SDLR  L ST+       D+I  KPL +A E +ENAI        
Sbjct: 12  ILHHISTFISEILVQSDLRKRLLSTVYDNFSLSDEIALKPLGLAAEALENAISADNSSIK 71

Query: 178 XXXXXXXXXXXXXYPESASSSFLLSLIYGLGQKTINAAISLLEVFYFDPLLARSEVAPII 357
                         PE+  SSFLLSLIYGL  + +N+A+SLL++F   P LARSE+API+
Sbjct: 72  TSSLRCAEELLLSLPENPISSFLLSLIYGLKHQNLNSALSLLDLFLLYPSLARSEIAPIL 131

Query: 358 FED 366
           FE+
Sbjct: 132 FEE 134


>ref|XP_004142566.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Cucumis
           sativus]
          Length = 1336

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 57/123 (46%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
 Frame = +1

Query: 1   ILDHTSTFIDEVLSNSDLRSSLFSTLKQKIH-PDQIIFKPLNVATETIENAIXXXXXXXX 177
           IL H STFI E+L  SDLR  L ST+       D+I  KPL +A E +ENAI        
Sbjct: 12  ILHHISTFISEILVQSDLRKRLLSTVYDNFSLSDEIALKPLGLAAEALENAISADNSSIK 71

Query: 178 XXXXXXXXXXXXXYPESASSSFLLSLIYGLGQKTINAAISLLEVFYFDPLLARSEVAPII 357
                         PE+  SSFLLSLIYGL  + +N+A+SLL++F   P LARSE+API+
Sbjct: 72  TSSLRCAEELLLSLPENPISSFLLSLIYGLKHQNLNSALSLLDLFLLYPSLARSEIAPIL 131

Query: 358 FED 366
           FE+
Sbjct: 132 FEE 134


>emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera]
          Length = 1618

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 56/136 (41%), Positives = 74/136 (54%), Gaps = 1/136 (0%)
 Frame = +1

Query: 1   ILDHTSTFIDEVLSNSDLRSSLFSTLKQKIHP-DQIIFKPLNVATETIENAIXXXXXXXX 177
           IL HT+ F  E LS S LR  L S L++K+   DQ + + LN+A ET+ENAI        
Sbjct: 311 ILRHTTAFTSETLSQSKLRLRLLSALRRKLPTSDQNVLRQLNLAAETLENAISTSSSFNR 370

Query: 178 XXXXXXXXXXXXXYPESASSSFLLSLIYGLGQKTINAAISLLEVFYFDPLLARSEVAPII 357
                        +P++  SSFLLSL+Y L  +   AA SLL +F  DP LARSE+AP++
Sbjct: 371 SSSLRVAEKLLHSHPDTLFSSFLLSLLYALLNRHTEAAXSLLNIFSSDPSLARSEIAPVV 430

Query: 358 FEDXXXXXXXXXXQSF 405
           FE+          QSF
Sbjct: 431 FEEFFLIHLLPVLQSF 446


>ref|XP_002325007.1| predicted protein [Populus trichocarpa] gi|222866441|gb|EEF03572.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 53/125 (42%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
 Frame = +1

Query: 1   ILDHTSTFIDEVLSNS-DLRSSLFSTLKQKIHPDQ--IIFKPLNVATETIENAIXXXXXX 171
           IL HT+ F+ E LS   D R  L STL+++          KPLN+A E +ENAI      
Sbjct: 9   ILHHTTAFLSETLSQPHDHRHHLLSTLRREAPSSNKTTTIKPLNLAVENLENAISTTNPS 68

Query: 172 XXXXXXXXXXXXXXXYPESASSSFLLSLIYGLGQKTINAAISLLEVFYFDPLLARSEVAP 351
                          YP+S  SS LLSLIY L  +  NA+ISLL +F+ DP LARS++AP
Sbjct: 69  IRSSSLRLAQKVLLSYPDSLLSSLLLSLIYTLNNRPTNASISLLNIFHLDPSLARSQIAP 128

Query: 352 IIFED 366
           ++FE+
Sbjct: 129 VLFEE 133