BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032284
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containi...   188   3e-46
emb|CBI31095.3| unnamed protein product [Vitis vinifera]              188   3e-46
ref|XP_002533770.1| pentatricopeptide repeat-containing protein,...   169   3e-40
ref|XP_003610950.1| Pentatricopeptide repeat-containing protein ...   160   1e-37
ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37

>ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Vitis vinifera]
          Length = 847

 Score =  188 bits (478), Expect = 3e-46
 Identities = 87/135 (64%), Positives = 110/135 (81%)
 Frame = -1

Query: 405 GQQVHGLATKLGYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQ 226
           GQQVH L  K G+E+++H+ NSL+DMYAK+GN+ +AEM+F   PEV+VVSWNV+IAGYGQ
Sbjct: 271 GQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQ 330

Query: 225 EGQSDKALELFQRMQLHGFEPDEVTYVSMLRACVKSGDIETACEMFDRIVSPIVSSWNAI 46
           + QS KA+E  QRMQ HGFEPDE+TYV+ML AC+KSGDIE   +MFD + SP +SSWN I
Sbjct: 331 KSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTI 390

Query: 45  LSGYSQKGCHEEAIE 1
           LSGYSQ   H+EA++
Sbjct: 391 LSGYSQNENHKEAVK 405



 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 51/138 (36%), Positives = 80/138 (57%), Gaps = 5/138 (3%)
 Frame = -1

Query: 405 GQQVHGLATKLGYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQ 226
           G+QVH    + GY  +  VG++LIDMY+K G++ AA  VF      N V+WN +I GY Q
Sbjct: 539 GRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQ 598

Query: 225 EGQSDKALELFQRMQLHGFEPDEVTYVSMLRACVKSGDIETACEMFDRI-----VSPIVS 61
            G  D+A+ L++ M   G +PD +T+V++L AC  SG ++T  ++F+ +     V P+V 
Sbjct: 599 NGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVD 658

Query: 60  SWNAILSGYSQKGCHEEA 7
            +  I+    + G   EA
Sbjct: 659 HYTCIIDSLGRAGRLHEA 676



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 35/169 (20%)
 Frame = -1

Query: 405 GQQVHGLATKLGYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQ 226
           G+QVH ++ K  +  +I++ + LI MY+K G +  A+ +F    E+++V WN ++AG   
Sbjct: 438 GRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSL 497

Query: 225 EGQSDKALELFQRMQLHGFEPDEVTYVSMLRACV-------------------------- 124
                +A   F++M+  G  P + +Y ++L  C                           
Sbjct: 498 NSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFV 557

Query: 123 ---------KSGDIETACEMFDRIVSPIVSSWNAILSGYSQKGCHEEAI 4
                    K GD++ A  +FD ++     +WN ++ GY+Q GC +EA+
Sbjct: 558 GSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAV 606



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 49/184 (26%), Positives = 77/184 (41%), Gaps = 49/184 (26%)
 Frame = -1

Query: 405 GQQVHGLATKLGYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQ 226
           G++ HG++ K+G +  I+VGN+L+ MYAK   +  A   F   PE N VS+  ++ G   
Sbjct: 156 GRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLAD 215

Query: 225 EGQSDKALELFQRMQ--------------------------------------------- 181
             Q ++A  LF+ M                                              
Sbjct: 216 SDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVH 275

Query: 180 ----LHGFEPDEVTYVSMLRACVKSGDIETACEMFDRIVSPIVSSWNAILSGYSQKGCHE 13
                HGFE D     S+L    K+G++++A  +F  +    V SWN +++GY QK    
Sbjct: 276 CLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSS 335

Query: 12  EAIE 1
           +AIE
Sbjct: 336 KAIE 339



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
 Frame = -1

Query: 360 EIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQEGQSDKALELFQRMQ 181
           +I+  N+++  Y K   L  A ++FA  PE N+VSWN LI+   + G   KAL ++ RM 
Sbjct: 70  DIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMS 129

Query: 180 LHGFEPDEVTYVSMLRACVKSGDIETACEMFDRIVSPIVSS----WNAILSGYSQKGCHE 13
             GF P   T  S+L AC    D+E         +   + +     NA+L  Y++  C  
Sbjct: 130 REGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIG 189

Query: 12  EAIE 1
           +AI+
Sbjct: 190 DAIQ 193


>emb|CBI31095.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  188 bits (478), Expect = 3e-46
 Identities = 87/135 (64%), Positives = 110/135 (81%)
 Frame = -1

Query: 405 GQQVHGLATKLGYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQ 226
           GQQVH L  K G+E+++H+ NSL+DMYAK+GN+ +AEM+F   PEV+VVSWNV+IAGYGQ
Sbjct: 242 GQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQ 301

Query: 225 EGQSDKALELFQRMQLHGFEPDEVTYVSMLRACVKSGDIETACEMFDRIVSPIVSSWNAI 46
           + QS KA+E  QRMQ HGFEPDE+TYV+ML AC+KSGDIE   +MFD + SP +SSWN I
Sbjct: 302 KSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTI 361

Query: 45  LSGYSQKGCHEEAIE 1
           LSGYSQ   H+EA++
Sbjct: 362 LSGYSQNENHKEAVK 376



 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 51/138 (36%), Positives = 80/138 (57%), Gaps = 5/138 (3%)
 Frame = -1

Query: 405 GQQVHGLATKLGYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQ 226
           G+QVH    + GY  +  VG++LIDMY+K G++ AA  VF      N V+WN +I GY Q
Sbjct: 510 GRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQ 569

Query: 225 EGQSDKALELFQRMQLHGFEPDEVTYVSMLRACVKSGDIETACEMFDRI-----VSPIVS 61
            G  D+A+ L++ M   G +PD +T+V++L AC  SG ++T  ++F+ +     V P+V 
Sbjct: 570 NGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVD 629

Query: 60  SWNAILSGYSQKGCHEEA 7
            +  I+    + G   EA
Sbjct: 630 HYTCIIDSLGRAGRLHEA 647



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 35/169 (20%)
 Frame = -1

Query: 405 GQQVHGLATKLGYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQ 226
           G+QVH ++ K  +  +I++ + LI MY+K G +  A+ +F    E+++V WN ++AG   
Sbjct: 409 GRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSL 468

Query: 225 EGQSDKALELFQRMQLHGFEPDEVTYVSMLRACV-------------------------- 124
                +A   F++M+  G  P + +Y ++L  C                           
Sbjct: 469 NSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFV 528

Query: 123 ---------KSGDIETACEMFDRIVSPIVSSWNAILSGYSQKGCHEEAI 4
                    K GD++ A  +FD ++     +WN ++ GY+Q GC +EA+
Sbjct: 529 GSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAV 577



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 49/184 (26%), Positives = 77/184 (41%), Gaps = 49/184 (26%)
 Frame = -1

Query: 405 GQQVHGLATKLGYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQ 226
           G++ HG++ K+G +  I+VGN+L+ MYAK   +  A   F   PE N VS+  ++ G   
Sbjct: 127 GRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLAD 186

Query: 225 EGQSDKALELFQRMQ--------------------------------------------- 181
             Q ++A  LF+ M                                              
Sbjct: 187 SDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVH 246

Query: 180 ----LHGFEPDEVTYVSMLRACVKSGDIETACEMFDRIVSPIVSSWNAILSGYSQKGCHE 13
                HGFE D     S+L    K+G++++A  +F  +    V SWN +++GY QK    
Sbjct: 247 CLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSS 306

Query: 12  EAIE 1
           +AIE
Sbjct: 307 KAIE 310


>ref|XP_002533770.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526307|gb|EEF28615.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 617

 Score =  169 bits (427), Expect = 3e-40
 Identities = 82/135 (60%), Positives = 106/135 (78%)
 Frame = -1

Query: 405 GQQVHGLATKLGYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQ 226
           G+  HGLA KLG+E+++H+ NSL+DMYAK G++ +AE VFA  PE++VVSWNV+IAGYGQ
Sbjct: 269 GKLAHGLAIKLGFESDLHLCNSLLDMYAKDGDMDSAEEVFANLPEMSVVSWNVMIAGYGQ 328

Query: 225 EGQSDKALELFQRMQLHGFEPDEVTYVSMLRACVKSGDIETACEMFDRIVSPIVSSWNAI 46
           + +S KA+E  QRMQ  GFEPDEVTY++ML ACV+SGDIE   ++FD +  P VSSWN +
Sbjct: 329 KCKSGKAIEYLQRMQSCGFEPDEVTYINMLTACVRSGDIEIGRQIFDCMACPGVSSWNGM 388

Query: 45  LSGYSQKGCHEEAIE 1
           LSGY Q   H EAI+
Sbjct: 389 LSGYFQIENHNEAIK 403



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 35/169 (20%)
 Frame = -1

Query: 405 GQQVHGLATKLGYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQ 226
           G+QVH ++ K  +  +I+V + LI MY+K G +  A+ +F    + + V WN +IAG   
Sbjct: 436 GKQVHAISQKAAFHEDIYVASGLIGMYSKCGKMDIADCIFKKISKQDTVCWNSMIAGLSL 495

Query: 225 EGQSDKALELFQRMQLHGFEPDEVTYVSMLRACV-------------------------- 124
               ++AL  FQ+M+  G  P + +Y ++L  C                           
Sbjct: 496 NSLDNEALAFFQQMRQSGMSPTQFSYATILSCCAKLSSLIHGKQIHAQIAKEGFVNDVYV 555

Query: 123 ---------KSGDIETACEMFDRIVSPIVSSWNAILSGYSQKGCHEEAI 4
                    K G++  A + FD + S    +WN ++ GY+Q G   EA+
Sbjct: 556 GSALVDMYCKCGEVGEARQFFDIMSSKNTVTWNEMIHGYAQNGHGHEAV 604



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 46/181 (25%)
 Frame = -1

Query: 405 GQQVHGLATKLGYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQ 226
           G++ H L  K+G +  ++V N+L+ +Y+K G +  A  +F    E N V++  +++G+ Q
Sbjct: 157 GRKCHTLIVKIGLDNNVYVSNALLSVYSKCGLVRDAVRLFEEMQEPNEVTYTAMMSGFTQ 216

Query: 225 EGQSDKALELFQRMQLHGFEPDEVTYVSMLRAC--------------------------- 127
             +  +ALE+F+ M   G   D V+  S+L  C                           
Sbjct: 217 TDRVVEALEMFRLMCRQGICIDSVSLSSVLGVCTKGGCGESDQSDGSLRNALGKLAHGLA 276

Query: 126 -------------------VKSGDIETACEMFDRIVSPIVSSWNAILSGYSQKGCHEEAI 4
                               K GD+++A E+F  +    V SWN +++GY QK    +AI
Sbjct: 277 IKLGFESDLHLCNSLLDMYAKDGDMDSAEEVFANLPEMSVVSWNVMIAGYGQKCKSGKAI 336

Query: 3   E 1
           E
Sbjct: 337 E 337



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/74 (36%), Positives = 43/74 (58%)
 Frame = -1

Query: 405 GQQVHGLATKLGYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQ 226
           G+Q+H    K G+  +++VG++L+DMY K G +  A   F      N V+WN +I GY Q
Sbjct: 537 GKQIHAQIAKEGFVNDVYVGSALVDMYCKCGEVGEARQFFDIMSSKNTVTWNEMIHGYAQ 596

Query: 225 EGQSDKALELFQRM 184
            G   +A+ L++ M
Sbjct: 597 NGHGHEAVCLYRDM 610



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
 Frame = -1

Query: 357 IHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQEGQSDKALELFQRMQL 178
           I+  N+++  Y K GNL  A  +F+  PE N+VSWN LI+   +     +AL+++  M  
Sbjct: 72  IYSWNAILTEYCKAGNLQNAHRLFSEMPERNIVSWNNLISALVRGRLEQQALDVYNEMIW 131

Query: 177 HGFEPDEVTYVSMLRACVKSGDIETACEMFDRIV----SPIVSSWNAILSGYSQKGCHEE 10
            G  P   T  S+L AC    ++E+  +    IV       V   NA+LS YS+ G   +
Sbjct: 132 EGLMPTHFTLASILSACGTLLNMESGRKCHTLIVKIGLDNNVYVSNALLSVYSKCGLVRD 191

Query: 9   AI 4
           A+
Sbjct: 192 AV 193


>ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512285|gb|AES93908.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 831

 Score =  160 bits (405), Expect = 1e-37
 Identities = 75/135 (55%), Positives = 103/135 (76%)
 Frame = -1

Query: 405 GQQVHGLATKLGYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQ 226
           G+Q+H LA K G+E ++H+ NSL+DMYAK G++ +AE VF    + +VVSWN++I+GYG 
Sbjct: 270 GKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGN 329

Query: 225 EGQSDKALELFQRMQLHGFEPDEVTYVSMLRACVKSGDIETACEMFDRIVSPIVSSWNAI 46
              S+KALE FQRMQ  G+EPD+VTY++ML ACVKSGD++   ++FD + SP + SWNAI
Sbjct: 330 RCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQIFDCMSSPSLISWNAI 389

Query: 45  LSGYSQKGCHEEAIE 1
           LSGY+Q   H EA+E
Sbjct: 390 LSGYNQSADHGEAVE 404



 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/110 (37%), Positives = 66/110 (60%)
 Frame = -1

Query: 405 GQQVHGLATKLGYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQ 226
           GQQ+H    K GY   + VG+SL++MY K G++ AA   F   P  N+V+WN +I GY  
Sbjct: 538 GQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAH 597

Query: 225 EGQSDKALELFQRMQLHGFEPDEVTYVSMLRACVKSGDIETACEMFDRIV 76
            G   +A+ L++ M   G +PD++T+V++L AC  S  ++   E+F  ++
Sbjct: 598 NGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSML 647



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 35/169 (20%)
 Frame = -1

Query: 405 GQQVHGLATKLGYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQ 226
           G+QVH ++ KLG+  +++V +SLI++Y+K G +  ++ VF+   E++VV WN +IAG+  
Sbjct: 437 GKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSI 496

Query: 225 EGQSDKALELFQRMQLHGFEPDEVTYVSMLRACV-------------------------- 124
                 AL  F+RM+  GF P E ++ ++  +C                           
Sbjct: 497 NSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFV 556

Query: 123 ---------KSGDIETACEMFDRIVSPIVSSWNAILSGYSQKGCHEEAI 4
                    K GD+  A   FD +    + +WN ++ GY+  G   EA+
Sbjct: 557 GSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAV 605



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 47/182 (25%)
 Frame = -1

Query: 405 GQQVHGLATKLGYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQ 226
           G++ HGL  K+G+++ I+V N+L+ MY K G    A  VF    E N V++  ++ G  Q
Sbjct: 157 GRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQ 216

Query: 225 EGQSDKALELFQRM---------------------------------------------- 184
             Q  + LELF+ M                                              
Sbjct: 217 TNQVKEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTL 276

Query: 183 -QLHGFEPDEVTYVSMLRACVKSGDIETACEMFDRIVSPIVSSWNAILSGYSQKGCHEEA 7
              HGFE D     S+L    K+GD+++A  +F+ +    V SWN ++SGY  +   E+A
Sbjct: 277 AVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKA 336

Query: 6   IE 1
           +E
Sbjct: 337 LE 338



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/158 (20%), Positives = 65/158 (41%), Gaps = 35/158 (22%)
 Frame = -1

Query: 372 GYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQEGQSDKALELF 193
           GYE +     +++    K G++     +F      +++SWN +++GY Q     +A+ELF
Sbjct: 347 GYEPDDVTYINMLTACVKSGDVKVGRQIFDCMSSPSLISWNAILSGYNQSADHGEAVELF 406

Query: 192 QRMQLHGFEPDEVTYVSMLRACV-----------------------------------KS 118
           ++MQ     PD  T   +L +C                                    K 
Sbjct: 407 RKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKC 466

Query: 117 GDIETACEMFDRIVSPIVSSWNAILSGYSQKGCHEEAI 4
           G +E +  +F ++    V  WN++++G+S     ++A+
Sbjct: 467 GKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDAL 504


>ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Glycine max]
          Length = 770

 Score =  159 bits (403), Expect = 2e-37
 Identities = 74/135 (54%), Positives = 101/135 (74%)
 Frame = -1

Query: 405 GQQVHGLATKLGYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQ 226
           G+Q+H L+ KLG+E ++H+ NSL+DMYAK G++ +AE VF      +VVSWN++IAGYG 
Sbjct: 268 GKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMIAGYGN 327

Query: 225 EGQSDKALELFQRMQLHGFEPDEVTYVSMLRACVKSGDIETACEMFDRIVSPIVSSWNAI 46
              S+KA E  QRMQ  G+EPD+VTY++ML ACVKSGD+ T  ++FD +  P ++SWNAI
Sbjct: 328 RCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACVKSGDVRTGRQIFDCMPCPSLTSWNAI 387

Query: 45  LSGYSQKGCHEEAIE 1
           LSGY+Q   H EA+E
Sbjct: 388 LSGYNQNADHREAVE 402



 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 51/137 (37%), Positives = 74/137 (54%), Gaps = 5/137 (3%)
 Frame = -1

Query: 405 GQQVHGLATKLGYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQ 226
           GQQ H    K G+  +I VG+SLI+MY K G++  A   F   P  N V+WN +I GY Q
Sbjct: 536 GQQFHAQIVKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQ 595

Query: 225 EGQSDKALELFQRMQLHGFEPDEVTYVSMLRACVKSGDIETACEMFDRI-----VSPIVS 61
            G    AL L+  M   G +PD++TYV++L AC  S  ++   E+F+ +     V P V+
Sbjct: 596 NGDGHNALCLYNDMISSGEKPDDITYVAVLTACSHSALVDEGLEIFNAMLQKYGVVPKVA 655

Query: 60  SWNAILSGYSQKGCHEE 10
            +  I+   S+ G   E
Sbjct: 656 HYTCIIDCLSRAGRFNE 672



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 35/169 (20%)
 Frame = -1

Query: 405 GQQVHGLATKLGYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQ 226
           G++VH  + K G+  +++V +SLI++Y+K G +  ++ VF+  PE++VV WN ++AG+  
Sbjct: 435 GKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLPELDVVCWNSMLAGFSI 494

Query: 225 EGQSDKALELFQRMQLHGFEPDEVTYVSMLRACV-------------------------- 124
                 AL  F++M+  GF P E ++ +++ +C                           
Sbjct: 495 NSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHAQIVKDGFLDDIFV 554

Query: 123 ---------KSGDIETACEMFDRIVSPIVSSWNAILSGYSQKGCHEEAI 4
                    K GD+  A   FD +      +WN ++ GY+Q G    A+
Sbjct: 555 GSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQNGDGHNAL 603



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 51/180 (28%), Positives = 77/180 (42%), Gaps = 45/180 (25%)
 Frame = -1

Query: 405 GQQVHGLATKLGYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQ 226
           G++ HG+  K+G E+ I+V N+L+ MYAK G    A  VF   PE N V++  ++ G  Q
Sbjct: 157 GRRTHGVVIKVGLESNIYVVNALLCMYAKCGLNADALRVFRDIPEPNEVTFTTMMGGLAQ 216

Query: 225 EGQSDKALELFQRMQLHGFEPDEVTYVSMLRACVKS------------------------ 118
             Q  +A ELF+ M   G   D V+  SML  C K                         
Sbjct: 217 TNQIKEAAELFRLMLRKGIRVDSVSLSSMLGVCAKGERDVGPCHGISTNAQGKQMHTLSV 276

Query: 117 ---------------------GDIETACEMFDRIVSPIVSSWNAILSGYSQKGCHEEAIE 1
                                GD+++A ++F  +    V SWN +++GY  +   E+A E
Sbjct: 277 KLGFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAE 336



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/94 (28%), Positives = 48/94 (51%)
 Frame = -1

Query: 372 GYEAEIHVGNSLIDMYAKHGNLVAAEMVFATSPEVNVVSWNVLIAGYGQEGQSDKALELF 193
           GYE +     +++    K G++     +F   P  ++ SWN +++GY Q     +A+ELF
Sbjct: 345 GYEPDDVTYINMLTACVKSGDVRTGRQIFDCMPCPSLTSWNAILSGYNQNADHREAVELF 404

Query: 192 QRMQLHGFEPDEVTYVSMLRACVKSGDIETACEM 91
           ++MQ     PD  T   +L +C + G +E   E+
Sbjct: 405 RKMQFQCQHPDRTTLAVILSSCAELGFLEAGKEV 438