BLASTX nr result

ID: Coptis25_contig00032278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032278
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280849.1| PREDICTED: UPF0136 membrane protein At2g2624...   110   1e-22
ref|NP_001235243.1| uncharacterized protein LOC100306195 [Glycin...   105   5e-21
ref|XP_002317590.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002522968.1| transmembrane protein 14, putative [Ricinus ...   103   1e-20
ref|XP_003617491.1| hypothetical protein MTR_5g092160 [Medicago ...   102   3e-20

>ref|XP_002280849.1| PREDICTED: UPF0136 membrane protein At2g26240 [Vitis vinifera]
           gi|297737418|emb|CBI26619.3| unnamed protein product
           [Vitis vinifera]
          Length = 119

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/60 (86%), Positives = 56/60 (93%)
 Frame = +1

Query: 1   LALVVEIVCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 180
           LAL++E VCA  LTWVMGQRY+QTSKIMPAG+VAGISALMT FYLYKIATGGNHIPTKAE
Sbjct: 60  LALILETVCAAALTWVMGQRYMQTSKIMPAGIVAGISALMTTFYLYKIATGGNHIPTKAE 119


>ref|NP_001235243.1| uncharacterized protein LOC100306195 [Glycine max]
           gi|255627833|gb|ACU14261.1| unknown [Glycine max]
          Length = 119

 Score =  105 bits (261), Expect = 5e-21
 Identities = 50/60 (83%), Positives = 55/60 (91%)
 Frame = +1

Query: 1   LALVVEIVCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 180
           LAL +E VCA +LTWVMGQRYL TSKIMPAG+VAGISALMT FYLYK+ATGGNH+PTKAE
Sbjct: 60  LALFLETVCAAILTWVMGQRYLGTSKIMPAGLVAGISALMTLFYLYKLATGGNHLPTKAE 119


>ref|XP_002317590.1| predicted protein [Populus trichocarpa] gi|222860655|gb|EEE98202.1|
           predicted protein [Populus trichocarpa]
          Length = 119

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/60 (83%), Positives = 54/60 (90%)
 Frame = +1

Query: 1   LALVVEIVCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 180
           L L +E VCA VLT+VMGQRY+QTSKIMPAG+VAGISALMT FYLYKIATGGNHIP KAE
Sbjct: 60  LGLAIETVCAAVLTFVMGQRYMQTSKIMPAGIVAGISALMTVFYLYKIATGGNHIPAKAE 119


>ref|XP_002522968.1| transmembrane protein 14, putative [Ricinus communis]
           gi|223537780|gb|EEF39398.1| transmembrane protein 14,
           putative [Ricinus communis]
          Length = 119

 Score =  103 bits (257), Expect = 1e-20
 Identities = 49/60 (81%), Positives = 54/60 (90%)
 Frame = +1

Query: 1   LALVVEIVCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 180
           LAL +E VCA VLT+VMGQRY+QTSKIMPAG+V GISALMTGFYL+KIAT GNHIP KAE
Sbjct: 60  LALAIETVCAAVLTFVMGQRYMQTSKIMPAGIVGGISALMTGFYLFKIATSGNHIPAKAE 119


>ref|XP_003617491.1| hypothetical protein MTR_5g092160 [Medicago truncatula]
           gi|217071360|gb|ACJ84040.1| unknown [Medicago
           truncatula] gi|355518826|gb|AET00450.1| hypothetical
           protein MTR_5g092160 [Medicago truncatula]
           gi|388495030|gb|AFK35581.1| unknown [Medicago
           truncatula]
          Length = 121

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/60 (78%), Positives = 55/60 (91%)
 Frame = +1

Query: 1   LALVVEIVCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 180
           LAL +EI+CA VLTW+MGQRYLQTSKIMPAG++AG+SALMT FYLYK+ATGGNHIP  A+
Sbjct: 60  LALAIEILCAGVLTWIMGQRYLQTSKIMPAGMIAGLSALMTLFYLYKLATGGNHIPATAK 119


Top