BLASTX nr result
ID: Coptis25_contig00032278
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00032278 (356 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280849.1| PREDICTED: UPF0136 membrane protein At2g2624... 110 1e-22 ref|NP_001235243.1| uncharacterized protein LOC100306195 [Glycin... 105 5e-21 ref|XP_002317590.1| predicted protein [Populus trichocarpa] gi|2... 103 1e-20 ref|XP_002522968.1| transmembrane protein 14, putative [Ricinus ... 103 1e-20 ref|XP_003617491.1| hypothetical protein MTR_5g092160 [Medicago ... 102 3e-20 >ref|XP_002280849.1| PREDICTED: UPF0136 membrane protein At2g26240 [Vitis vinifera] gi|297737418|emb|CBI26619.3| unnamed protein product [Vitis vinifera] Length = 119 Score = 110 bits (275), Expect = 1e-22 Identities = 52/60 (86%), Positives = 56/60 (93%) Frame = +1 Query: 1 LALVVEIVCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 180 LAL++E VCA LTWVMGQRY+QTSKIMPAG+VAGISALMT FYLYKIATGGNHIPTKAE Sbjct: 60 LALILETVCAAALTWVMGQRYMQTSKIMPAGIVAGISALMTTFYLYKIATGGNHIPTKAE 119 >ref|NP_001235243.1| uncharacterized protein LOC100306195 [Glycine max] gi|255627833|gb|ACU14261.1| unknown [Glycine max] Length = 119 Score = 105 bits (261), Expect = 5e-21 Identities = 50/60 (83%), Positives = 55/60 (91%) Frame = +1 Query: 1 LALVVEIVCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 180 LAL +E VCA +LTWVMGQRYL TSKIMPAG+VAGISALMT FYLYK+ATGGNH+PTKAE Sbjct: 60 LALFLETVCAAILTWVMGQRYLGTSKIMPAGLVAGISALMTLFYLYKLATGGNHLPTKAE 119 >ref|XP_002317590.1| predicted protein [Populus trichocarpa] gi|222860655|gb|EEE98202.1| predicted protein [Populus trichocarpa] Length = 119 Score = 103 bits (258), Expect = 1e-20 Identities = 50/60 (83%), Positives = 54/60 (90%) Frame = +1 Query: 1 LALVVEIVCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 180 L L +E VCA VLT+VMGQRY+QTSKIMPAG+VAGISALMT FYLYKIATGGNHIP KAE Sbjct: 60 LGLAIETVCAAVLTFVMGQRYMQTSKIMPAGIVAGISALMTVFYLYKIATGGNHIPAKAE 119 >ref|XP_002522968.1| transmembrane protein 14, putative [Ricinus communis] gi|223537780|gb|EEF39398.1| transmembrane protein 14, putative [Ricinus communis] Length = 119 Score = 103 bits (257), Expect = 1e-20 Identities = 49/60 (81%), Positives = 54/60 (90%) Frame = +1 Query: 1 LALVVEIVCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 180 LAL +E VCA VLT+VMGQRY+QTSKIMPAG+V GISALMTGFYL+KIAT GNHIP KAE Sbjct: 60 LALAIETVCAAVLTFVMGQRYMQTSKIMPAGIVGGISALMTGFYLFKIATSGNHIPAKAE 119 >ref|XP_003617491.1| hypothetical protein MTR_5g092160 [Medicago truncatula] gi|217071360|gb|ACJ84040.1| unknown [Medicago truncatula] gi|355518826|gb|AET00450.1| hypothetical protein MTR_5g092160 [Medicago truncatula] gi|388495030|gb|AFK35581.1| unknown [Medicago truncatula] Length = 121 Score = 102 bits (254), Expect = 3e-20 Identities = 47/60 (78%), Positives = 55/60 (91%) Frame = +1 Query: 1 LALVVEIVCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 180 LAL +EI+CA VLTW+MGQRYLQTSKIMPAG++AG+SALMT FYLYK+ATGGNHIP A+ Sbjct: 60 LALAIEILCAGVLTWIMGQRYLQTSKIMPAGMIAGLSALMTLFYLYKLATGGNHIPATAK 119