BLASTX nr result
ID: Coptis25_contig00032274
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00032274
(472 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27189.3| unnamed protein product [Vitis vinifera] 65 2e-20
emb|CAN60953.1| hypothetical protein VITISV_008875 [Vitis vinifera] 65 2e-20
ref|XP_002526581.1| coatomer delta subunit, putative [Ricinus co... 65 2e-20
ref|XP_003540999.1| PREDICTED: coatomer subunit delta-like [Glyc... 65 3e-20
ref|XP_004156581.1| PREDICTED: coatomer subunit delta-like [Cucu... 64 3e-20
>emb|CBI27189.3| unnamed protein product [Vitis vinifera]
Length = 561
Score = 65.1 bits (157), Expect(4) = 2e-20
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +2
Query: 251 EAALQTSFELIFAFDEVITLGQNENVTFTDIKEYCKMVSPNENLHKLKMNNMI 409
E +T+FELIFAFDEVI+LG ENVT +K+YC+M S E LHKL + + I
Sbjct: 130 EGVCKTAFELIFAFDEVISLGHKENVTVAQVKQYCEMESHEEKLHKLVLQSKI 182
Score = 39.3 bits (90), Expect(4) = 2e-20
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 6/34 (17%)
Frame = +3
Query: 147 GKRHTSFEYEDVRYVF------YLLLVTDKQSNI 230
GK+HT E E+VRYV+ YLLLVT+KQSNI
Sbjct: 73 GKQHTYVETENVRYVYQPIEALYLLLVTNKQSNI 106
Score = 30.0 bits (66), Expect(4) = 2e-20
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 94 FVDTSRIRIERILGAFPK 147
FVD +RIRIE +L AFPK
Sbjct: 51 FVDMTRIRIEALLAAFPK 68
Score = 28.9 bits (63), Expect(4) = 2e-20
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3
Query: 423 RRASEIDKAKIDKNTG 470
R+ASEIDK+KI+KN G
Sbjct: 191 RKASEIDKSKIEKNRG 206
>emb|CAN60953.1| hypothetical protein VITISV_008875 [Vitis vinifera]
Length = 531
Score = 65.1 bits (157), Expect(4) = 2e-20
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +2
Query: 251 EAALQTSFELIFAFDEVITLGQNENVTFTDIKEYCKMVSPNENLHKLKMNNMI 409
E +T+FELIFAFDEVI+LG ENVT +K+YC+M S E LHKL + + I
Sbjct: 100 EGVCKTAFELIFAFDEVISLGHKENVTVAQVKQYCEMESHEEKLHKLVLQSKI 152
Score = 39.3 bits (90), Expect(4) = 2e-20
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 6/34 (17%)
Frame = +3
Query: 147 GKRHTSFEYEDVRYVF------YLLLVTDKQSNI 230
GK+HT E E+VRYV+ YLLLVT+KQSNI
Sbjct: 43 GKQHTYVETENVRYVYQPIEALYLLLVTNKQSNI 76
Score = 30.0 bits (66), Expect(4) = 2e-20
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 94 FVDTSRIRIERILGAFPK 147
FVD +RIRIE +L AFPK
Sbjct: 21 FVDMTRIRIEALLAAFPK 38
Score = 28.9 bits (63), Expect(4) = 2e-20
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3
Query: 423 RRASEIDKAKIDKNTG 470
R+ASEIDK+KI+KN G
Sbjct: 161 RKASEIDKSKIEKNRG 176
>ref|XP_002526581.1| coatomer delta subunit, putative [Ricinus communis]
gi|223534075|gb|EEF35793.1| coatomer delta subunit,
putative [Ricinus communis]
Length = 530
Score = 64.7 bits (156), Expect(4) = 2e-20
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +2
Query: 251 EAALQTSFELIFAFDEVITLGQNENVTFTDIKEYCKMVSPNENLHKLKMNNMI 409
E +T+FELIFAFDEVI+LG ENVT +K+YC+M S E LHKL + + I
Sbjct: 100 EGICKTAFELIFAFDEVISLGHKENVTVAQVKQYCEMESHEEKLHKLVLQSKI 152
Score = 39.7 bits (91), Expect(4) = 2e-20
Identities = 22/37 (59%), Positives = 26/37 (70%), Gaps = 6/37 (16%)
Frame = +3
Query: 138 IPQGKRHTSFEYEDVRYVF------YLLLVTDKQSNI 230
I GK+HT E E+VRYV+ YLLLVT+KQSNI
Sbjct: 40 IGTGKQHTYVETENVRYVYQPIEVLYLLLVTNKQSNI 76
Score = 29.6 bits (65), Expect(4) = 2e-20
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 94 FVDTSRIRIERILGAFPK 147
FVD SR+RIE +L AFPK
Sbjct: 21 FVDMSRMRIEGLLAAFPK 38
Score = 28.9 bits (63), Expect(4) = 2e-20
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3
Query: 423 RRASEIDKAKIDKNTG 470
R+ASEIDK+KI+KN G
Sbjct: 161 RKASEIDKSKIEKNRG 176
>ref|XP_003540999.1| PREDICTED: coatomer subunit delta-like [Glycine max]
Length = 530
Score = 64.7 bits (156), Expect(4) = 3e-20
Identities = 31/53 (58%), Positives = 37/53 (69%)
Frame = +2
Query: 251 EAALQTSFELIFAFDEVITLGQNENVTFTDIKEYCKMVSPNENLHKLKMNNMI 409
E Q +FELIFAFDEVI+LG ENVT +K+YC+M S E LHKL M + I
Sbjct: 100 EDICQNAFELIFAFDEVISLGHTENVTVAQVKQYCEMESHEEKLHKLVMQSKI 152
Score = 38.1 bits (87), Expect(4) = 3e-20
Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 6/37 (16%)
Frame = +3
Query: 138 IPQGKRHTSFEYEDVRYVF------YLLLVTDKQSNI 230
I GK+HT E E+VRYV+ YLLLVT+K SNI
Sbjct: 40 IGTGKQHTYVEMENVRYVYQPMEALYLLLVTNKHSNI 76
Score = 30.8 bits (68), Expect(4) = 3e-20
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1
Query: 94 FVDTSRIRIERILGAFPK 147
FVD SRIRIE +L AFPK
Sbjct: 21 FVDMSRIRIEGLLAAFPK 38
Score = 28.9 bits (63), Expect(4) = 3e-20
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3
Query: 423 RRASEIDKAKIDKNTG 470
R+ASEIDK+KI+KN G
Sbjct: 161 RKASEIDKSKIEKNRG 176
>ref|XP_004156581.1| PREDICTED: coatomer subunit delta-like [Cucumis sativus]
Length = 530
Score = 63.5 bits (153), Expect(4) = 3e-20
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = +2
Query: 251 EAALQTSFELIFAFDEVITLGQNENVTFTDIKEYCKMVSPNENLHKLKMNNMI 409
E +T+F+LIFAFDEVI+LG ENVT +K+YC+M S E LHKL + + I
Sbjct: 100 EGICKTAFDLIFAFDEVISLGHKENVTVAQVKQYCEMESHEEKLHKLVLQSKI 152
Score = 39.3 bits (90), Expect(4) = 3e-20
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 6/34 (17%)
Frame = +3
Query: 147 GKRHTSFEYEDVRYVF------YLLLVTDKQSNI 230
GK+HT E E+VRYV+ YLLLVT+KQSNI
Sbjct: 43 GKQHTYVETENVRYVYQPIEALYLLLVTNKQSNI 76
Score = 30.8 bits (68), Expect(4) = 3e-20
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1
Query: 94 FVDTSRIRIERILGAFPK 147
FVD SRIRIE +L AFPK
Sbjct: 21 FVDMSRIRIEGLLAAFPK 38
Score = 28.9 bits (63), Expect(4) = 3e-20
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3
Query: 423 RRASEIDKAKIDKNTG 470
R+ASEIDK+KI+KN G
Sbjct: 161 RKASEIDKSKIEKNRG 176