BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032264
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631273.1| PREDICTED: probable polygalacturonase At1g80...   185   3e-45
emb|CBI28554.3| unnamed protein product [Vitis vinifera]              185   3e-45
ref|XP_002328587.1| predicted protein [Populus trichocarpa] gi|2...   181   5e-44
ref|NP_173760.2| polygalacturonase [Arabidopsis thaliana] gi|332...   181   7e-44
ref|XP_002317091.1| predicted protein [Populus trichocarpa] gi|2...   180   9e-44

>ref|XP_003631273.1| PREDICTED: probable polygalacturonase At1g80170-like [Vitis
           vinifera]
          Length = 462

 Score =  185 bits (470), Expect = 3e-45
 Identities = 92/129 (71%), Positives = 99/129 (76%)
 Frame = -3

Query: 388 QAFLSAWNKSCSIPKSVFLVPERRRYLLKPAAFKGPCADKLIIQIDGTIVAXXXXXXXXX 209
           QAFLSAW+K+CS PKSV LVP+ R YL+    FKGPCADKL+IQIDGTIVA         
Sbjct: 80  QAFLSAWDKACSTPKSVLLVPQGRSYLVNATRFKGPCADKLLIQIDGTIVAPDEPKNWDP 139

Query: 208 XXPRTWLHFSKLKGVSFQGAGVIDGSGGKWWDSSCKRNKSNPCREAPTALTIQSSSAVSV 29
             PR WL FSKLKGV FQG G+IDGSG KWW SSCKRNKSNPCR APTALTI SSS+V V
Sbjct: 140 KNPRNWLDFSKLKGVLFQGGGIIDGSGSKWWASSCKRNKSNPCRGAPTALTIDSSSSVWV 199

Query: 28  NGLNIQNSQ 2
            GL IQNSQ
Sbjct: 200 KGLTIQNSQ 208


>emb|CBI28554.3| unnamed protein product [Vitis vinifera]
          Length = 1125

 Score =  185 bits (470), Expect = 3e-45
 Identities = 92/129 (71%), Positives = 99/129 (76%)
 Frame = -3

Query: 388  QAFLSAWNKSCSIPKSVFLVPERRRYLLKPAAFKGPCADKLIIQIDGTIVAXXXXXXXXX 209
            QAFLSAW+K+CS PKSV LVP+ R YL+    FKGPCADKL+IQIDGTIVA         
Sbjct: 729  QAFLSAWDKACSTPKSVLLVPQGRSYLVNATRFKGPCADKLLIQIDGTIVAPDEPKNWDP 788

Query: 208  XXPRTWLHFSKLKGVSFQGAGVIDGSGGKWWDSSCKRNKSNPCREAPTALTIQSSSAVSV 29
              PR WL FSKLKGV FQG G+IDGSG KWW SSCKRNKSNPCR APTALTI SSS+V V
Sbjct: 789  KNPRNWLDFSKLKGVLFQGGGIIDGSGSKWWASSCKRNKSNPCRGAPTALTIDSSSSVWV 848

Query: 28   NGLNIQNSQ 2
             GL IQNSQ
Sbjct: 849  KGLTIQNSQ 857


>ref|XP_002328587.1| predicted protein [Populus trichocarpa] gi|222838569|gb|EEE76934.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  181 bits (459), Expect = 5e-44
 Identities = 88/129 (68%), Positives = 97/129 (75%)
 Frame = -3

Query: 388 QAFLSAWNKSCSIPKSVFLVPERRRYLLKPAAFKGPCADKLIIQIDGTIVAXXXXXXXXX 209
           QAF  AWN +C+ PKSVFLVP  R Y++    FKGPCAD+L+IQIDGTIVA         
Sbjct: 81  QAFEKAWNTACTTPKSVFLVPPGRHYMVNATRFKGPCADRLVIQIDGTIVAPDEPKNWDP 140

Query: 208 XXPRTWLHFSKLKGVSFQGAGVIDGSGGKWWDSSCKRNKSNPCREAPTALTIQSSSAVSV 29
             PR WL+FSKL GV FQG GVIDGSG KWW SSCK+NKSNPCR APTALTI SSSAV +
Sbjct: 141 NLPRLWLYFSKLNGVLFQGNGVIDGSGSKWWASSCKKNKSNPCRGAPTALTIDSSSAVKI 200

Query: 28  NGLNIQNSQ 2
           NGL IQNSQ
Sbjct: 201 NGLTIQNSQ 209


>ref|NP_173760.2| polygalacturonase [Arabidopsis thaliana]
           gi|332192268|gb|AEE30389.1| polygalacturonase
           [Arabidopsis thaliana]
          Length = 460

 Score =  181 bits (458), Expect = 7e-44
 Identities = 88/129 (68%), Positives = 97/129 (75%)
 Frame = -3

Query: 388 QAFLSAWNKSCSIPKSVFLVPERRRYLLKPAAFKGPCADKLIIQIDGTIVAXXXXXXXXX 209
           QAF+SAW+K+CS  KSVFLVPE RRYL+    F GPC  KLIIQIDGTIVA         
Sbjct: 84  QAFVSAWSKACSTSKSVFLVPEGRRYLVNATKFNGPCEQKLIIQIDGTIVAPDEPSNWDS 143

Query: 208 XXPRTWLHFSKLKGVSFQGAGVIDGSGGKWWDSSCKRNKSNPCREAPTALTIQSSSAVSV 29
              R WL FSKLKGV FQG GVIDGSG KWW +SCK+NKSNPC+ APTALTI+SSS V V
Sbjct: 144 KFQRIWLEFSKLKGVVFQGKGVIDGSGSKWWAASCKKNKSNPCKSAPTALTIESSSGVKV 203

Query: 28  NGLNIQNSQ 2
           +GL IQNSQ
Sbjct: 204 SGLTIQNSQ 212


>ref|XP_002317091.1| predicted protein [Populus trichocarpa] gi|222860156|gb|EEE97703.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score =  180 bits (457), Expect = 9e-44
 Identities = 89/129 (68%), Positives = 95/129 (73%)
 Frame = -3

Query: 388 QAFLSAWNKSCSIPKSVFLVPERRRYLLKPAAFKGPCADKLIIQIDGTIVAXXXXXXXXX 209
           QAF+ AW  +C+IPKSVFLVP  RRYL+    FKGPC DKLIIQIDGTIVA         
Sbjct: 51  QAFVKAWGTACAIPKSVFLVPSGRRYLVNATRFKGPCEDKLIIQIDGTIVAPDEPKNWDP 110

Query: 208 XXPRTWLHFSKLKGVSFQGAGVIDGSGGKWWDSSCKRNKSNPCREAPTALTIQSSSAVSV 29
              R WL FSKL GV FQG GVIDGSG KWW SSCK+NKSNPCR APTALTI SSSAV V
Sbjct: 111 DLARLWLDFSKLNGVLFQGNGVIDGSGSKWWASSCKKNKSNPCRGAPTALTIDSSSAVKV 170

Query: 28  NGLNIQNSQ 2
            GL I+NSQ
Sbjct: 171 KGLTIKNSQ 179