BLASTX nr result

ID: Coptis25_contig00032255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032255
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140108.1| PREDICTED: elongation of fatty acids protein...   285   8e-75
ref|XP_002275577.1| PREDICTED: putative elongation of fatty acid...   273   2e-71
ref|XP_002303157.1| predicted protein [Populus trichocarpa] gi|2...   267   2e-69
ref|XP_004158640.1| PREDICTED: putative elongation of fatty acid...   263   2e-68
ref|XP_004140230.1| PREDICTED: putative elongation of fatty acid...   263   2e-68

>ref|XP_004140108.1| PREDICTED: elongation of fatty acids protein 1-like [Cucumis
           sativus] gi|449490493|ref|XP_004158621.1| PREDICTED:
           elongation of fatty acids protein 1-like [Cucumis
           sativus]
          Length = 272

 Score =  285 bits (728), Expect = 8e-75
 Identities = 130/219 (59%), Positives = 168/219 (76%)
 Frame = +3

Query: 33  MESMYSITRYWLSEHPLVSKFEWKEGETFGASYHFLLTTVLSYLSITLILXXXXXXXXXX 212
           M  + S+ RYWL  HP++  FEW +G+TF ++  FL+ TV +YL +T +L          
Sbjct: 1   MNQILSVLRYWLVNHPIILNFEWIQGQTFASTPLFLIVTVFTYLFLTFLLSHIPIPSISS 60

Query: 213 XXXXLRFISTIHNFILVILSFIMAVGCTISTITQMPNHRWVFCFPPNQTPPSGPVFFWAY 392
               L+ IS +HNF+L+ILSFIMA+GCT+S+I  +P+  W+ CFPP +TPP GP+FFWAY
Sbjct: 61  HF--LKSISALHNFVLLILSFIMALGCTLSSIYHVPHLHWIICFPP-RTPPVGPLFFWAY 117

Query: 393 IFYLSKFLEFIDTLLIILSGDVRRLSFLHVYHHAVVVIMCYIWLHTSQSLFPIALVTNAS 572
           +FYLSK LEFIDTLLIIL+G  +RL+FLHVYHH+ V+IMCY+WLHTSQSLFPIALVTNA+
Sbjct: 118 VFYLSKILEFIDTLLIILTGSFQRLTFLHVYHHSTVLIMCYLWLHTSQSLFPIALVTNAT 177

Query: 573 VHTLMYAYYMMCGLGKRPPWKKLVTNCQIVQFVFSFGIS 689
           VH +MY YY +C  G RP WK+LVT+CQI+QFVFSF +S
Sbjct: 178 VHVIMYGYYFLCTFGIRPKWKRLVTDCQILQFVFSFVVS 216


>ref|XP_002275577.1| PREDICTED: putative elongation of fatty acids protein
           DDB_G0272012-like [Vitis vinifera]
          Length = 265

 Score =  273 bits (699), Expect = 2e-71
 Identities = 127/210 (60%), Positives = 159/210 (75%)
 Frame = +3

Query: 60  YWLSEHPLVSKFEWKEGETFGASYHFLLTTVLSYLSITLILXXXXXXXXXXXXXXLRFIS 239
           ++L +HP ++ FEWK+G T+GAS  FL  T+  YL++T +L              LR IS
Sbjct: 6   HYLVDHPTLANFEWKQGHTWGASTQFLTLTIFCYLTLTYLLSHSQIPTLHPLL--LRPIS 63

Query: 240 TIHNFILVILSFIMAVGCTISTITQMPNHRWVFCFPPNQTPPSGPVFFWAYIFYLSKFLE 419
             HN +L++LS  M VGC++S  +Q P+ RW+FCFPP+ TPPSGP FFWAY+FYLSK +E
Sbjct: 64  AAHNLLLLLLSLAMVVGCSLSAASQTPDTRWIFCFPPD-TPPSGPTFFWAYVFYLSKIVE 122

Query: 420 FIDTLLIILSGDVRRLSFLHVYHHAVVVIMCYIWLHTSQSLFPIALVTNASVHTLMYAYY 599
           FIDT LIILSG ++RLSFLHVYHH VV+IMCYIWLHTSQSL P+ALVTNASVH LMY YY
Sbjct: 123 FIDTFLIILSGSIKRLSFLHVYHHTVVLIMCYIWLHTSQSLMPVALVTNASVHVLMYTYY 182

Query: 600 MMCGLGKRPPWKKLVTNCQIVQFVFSFGIS 689
           + C LG RP WK++VT+ QIVQF+FSF +S
Sbjct: 183 LSCTLGWRPRWKRVVTDVQIVQFMFSFAVS 212


>ref|XP_002303157.1| predicted protein [Populus trichocarpa] gi|222840589|gb|EEE78136.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score =  267 bits (682), Expect = 2e-69
 Identities = 125/221 (56%), Positives = 160/221 (72%), Gaps = 2/221 (0%)
 Frame = +3

Query: 33  MESMYSITRYWLSEHPLVSKFEWKEGETFGASYHFLLTTVLSYLSITLILXXXXXXXXXX 212
           M  + S  +YWL  HP +  F W  G+TFG+SY FL  TV +YL +T +L          
Sbjct: 1   MNPILSTLQYWLVNHPKILHFSWTPGQTFGSSYQFLALTVAAYLFLTFLLSRIPLPSSLR 60

Query: 213 XXXXLRFISTIHNFILVILSFIMAVGCTISTI--TQMPNHRWVFCFPPNQTPPSGPVFFW 386
               L+ I+ +H+F+L +LSFIMA+GCT+S I  T  P+   + CFPP+ TP SGP+FFW
Sbjct: 61  RPHILKPITALHSFVLFLLSFIMALGCTLSIISPTARPHFHHIICFPPH-TPQSGPLFFW 119

Query: 387 AYIFYLSKFLEFIDTLLIILSGDVRRLSFLHVYHHAVVVIMCYIWLHTSQSLFPIALVTN 566
           AY+FYLSK LEF+DTLLIILS  ++RL+FLHVYHHA VV+MCY+WL TSQSLFP+AL+TN
Sbjct: 120 AYVFYLSKILEFVDTLLIILSNSIQRLTFLHVYHHATVVVMCYLWLMTSQSLFPVALITN 179

Query: 567 ASVHTLMYAYYMMCGLGKRPPWKKLVTNCQIVQFVFSFGIS 689
           + VH +MY YY+   +G RP WK+LVT+CQIVQFVFSF IS
Sbjct: 180 SLVHMVMYYYYLWSAMGVRPKWKRLVTDCQIVQFVFSFAIS 220


>ref|XP_004158640.1| PREDICTED: putative elongation of fatty acids protein
           DDB_G0272012-like [Cucumis sativus]
          Length = 273

 Score =  263 bits (673), Expect = 2e-68
 Identities = 124/207 (59%), Positives = 151/207 (72%)
 Frame = +3

Query: 60  YWLSEHPLVSKFEWKEGETFGASYHFLLTTVLSYLSITLILXXXXXXXXXXXXXXLRFIS 239
           YWL  HP +  F W +GET G+S  FL  TV++YLS+T +L              L+ IS
Sbjct: 11  YWLVNHPKILNFSWSQGETLGSSPLFLTVTVIAYLSLTFLLSNLSLPLLPPTI--LKRIS 68

Query: 240 TIHNFILVILSFIMAVGCTISTITQMPNHRWVFCFPPNQTPPSGPVFFWAYIFYLSKFLE 419
            +HN IL+ LSF MA+GCT+ST +  P+  ++ C P  +TPP GP+FFWAYIFYLSK LE
Sbjct: 69  VVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLPL-KTPPRGPLFFWAYIFYLSKILE 127

Query: 420 FIDTLLIILSGDVRRLSFLHVYHHAVVVIMCYIWLHTSQSLFPIALVTNASVHTLMYAYY 599
           FIDT LIILSG  +RL+FLHVYHHA VVIMCY+WLH+SQSLFP+ LVTN+SVH LMY YY
Sbjct: 128 FIDTFLIILSGSTKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVHVLMYTYY 187

Query: 600 MMCGLGKRPPWKKLVTNCQIVQFVFSF 680
           + C LG RP WK++VT CQIVQF FSF
Sbjct: 188 LSCALGIRPRWKRIVTECQIVQFQFSF 214


>ref|XP_004140230.1| PREDICTED: putative elongation of fatty acids protein
           DDB_G0272012-like [Cucumis sativus]
          Length = 273

 Score =  263 bits (673), Expect = 2e-68
 Identities = 124/207 (59%), Positives = 151/207 (72%)
 Frame = +3

Query: 60  YWLSEHPLVSKFEWKEGETFGASYHFLLTTVLSYLSITLILXXXXXXXXXXXXXXLRFIS 239
           YWL  HP +  F W +GET G+S  FL  TV++YLS+T +L              L+ IS
Sbjct: 11  YWLLNHPKILNFSWSQGETLGSSPLFLTVTVIAYLSLTFLLSNLSLPLLPPTI--LKRIS 68

Query: 240 TIHNFILVILSFIMAVGCTISTITQMPNHRWVFCFPPNQTPPSGPVFFWAYIFYLSKFLE 419
            +HN IL+ LSF MA+GCT+ST +  P+  ++ C P  +TPP GP+FFWAYIFYLSK LE
Sbjct: 69  VVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLPL-KTPPRGPLFFWAYIFYLSKILE 127

Query: 420 FIDTLLIILSGDVRRLSFLHVYHHAVVVIMCYIWLHTSQSLFPIALVTNASVHTLMYAYY 599
           FIDT LIILSG  +RL+FLHVYHHA VVIMCY+WLH+SQSLFP+ LVTN+SVH LMY YY
Sbjct: 128 FIDTFLIILSGSTKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVHVLMYTYY 187

Query: 600 MMCGLGKRPPWKKLVTNCQIVQFVFSF 680
           + C LG RP WK++VT CQIVQF FSF
Sbjct: 188 LSCALGIRPRWKRIVTECQIVQFQFSF 214


Top