BLASTX nr result

ID: Coptis25_contig00032224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032224
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABS32230.1| transducin family protein [Carica papaya] gi|1645...    77   4e-15
ref|XP_004138371.1| PREDICTED: vegetative incompatibility protei...    73   7e-14
ref|XP_004162166.1| PREDICTED: vegetative incompatibility protei...    72   1e-13
ref|XP_002326013.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_002282186.1| PREDICTED: angio-associated migratory cell p...    64   3e-11

>gb|ABS32230.1| transducin family protein [Carica papaya]
           gi|164522082|gb|ABY60781.1| transducin family protein
           [Carica papaya]
          Length = 408

 Score = 77.0 bits (188), Expect(2) = 4e-15
 Identities = 38/81 (46%), Positives = 46/81 (56%)
 Frame = -2

Query: 284 AVACSPTDSTLVAAGGSGTGAFLWNINQGDQRQVIIGHXXXXXXXXXXXDGKFLACGTGQ 105
           AVACSPTD+ LVA GG     FLW I +GD    ++GH           DG+FLA G   
Sbjct: 65  AVACSPTDARLVATGGGDDKGFLWKIGRGDWGSELLGHKDSVSCLAFSTDGQFLASGGLD 124

Query: 104 GRVQVWDICSSSHKCTFDGPE 42
           G VQ+WD  S + KC  +GPE
Sbjct: 125 GLVQIWDASSGNIKCALEGPE 145



 Score = 28.9 bits (63), Expect(2) = 4e-15
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -3

Query: 37  LRWHPRGHFVLA 2
           +RWHPRGH VLA
Sbjct: 151 VRWHPRGHLVLA 162


>ref|XP_004138371.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Cucumis
           sativus]
          Length = 392

 Score = 72.8 bits (177), Expect(2) = 7e-14
 Identities = 34/82 (41%), Positives = 45/82 (54%)
 Frame = -2

Query: 290 ICAVACSPTDSTLVAAGGSGTGAFLWNINQGDQRQVIIGHXXXXXXXXXXXDGKFLACGT 111
           +  V CSP D+TLVA GG     F+W I +GD  Q + GH           DG+ LA G+
Sbjct: 65  VYTVVCSPVDATLVATGGGDDKGFMWKIGRGDFAQELSGHKDSVSSLAFSADGQLLASGS 124

Query: 110 GQGRVQVWDICSSSHKCTFDGP 45
             G +Q+WD  S + KCT +GP
Sbjct: 125 FDGIIQIWDTSSGNLKCTLEGP 146



 Score = 28.9 bits (63), Expect(2) = 7e-14
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -3

Query: 37  LRWHPRGHFVLA 2
           +RWHPRGH VLA
Sbjct: 153 VRWHPRGHLVLA 164


>ref|XP_004162166.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Cucumis
           sativus]
          Length = 392

 Score = 72.4 bits (176), Expect(2) = 1e-13
 Identities = 34/82 (41%), Positives = 45/82 (54%)
 Frame = -2

Query: 290 ICAVACSPTDSTLVAAGGSGTGAFLWNINQGDQRQVIIGHXXXXXXXXXXXDGKFLACGT 111
           +  V CSP D+TLVA GG     F+W I +GD  Q + GH           DG+ LA G+
Sbjct: 65  VYTVVCSPLDATLVATGGGDDKGFMWKIGRGDFAQELSGHKDSVSSLAFSADGQLLASGS 124

Query: 110 GQGRVQVWDICSSSHKCTFDGP 45
             G +Q+WD  S + KCT +GP
Sbjct: 125 FDGIIQIWDTSSGNLKCTLEGP 146



 Score = 28.9 bits (63), Expect(2) = 1e-13
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -3

Query: 37  LRWHPRGHFVLA 2
           +RWHPRGH VLA
Sbjct: 153 VRWHPRGHLVLA 164


>ref|XP_002326013.1| predicted protein [Populus trichocarpa] gi|222862888|gb|EEF00395.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/81 (43%), Positives = 43/81 (53%)
 Frame = -2

Query: 281 VACSPTDSTLVAAGGSGTGAFLWNINQGDQRQVIIGHXXXXXXXXXXXDGKFLACGTGQG 102
           V+CSPTD  LVA GG     FLW I  GD    + GH           DG+ LA G   G
Sbjct: 66  VSCSPTDPLLVATGGGDDKGFLWKIGLGDWASELKGHKDSVSCLAFSSDGQLLASGGFDG 125

Query: 101 RVQVWDICSSSHKCTFDGPED 39
            VQ+WD  S +HKC  +GP++
Sbjct: 126 LVQIWDASSGNHKCVLEGPDE 146


>ref|XP_002282186.1| PREDICTED: angio-associated migratory cell protein-like [Vitis
           vinifera]
          Length = 391

 Score = 64.3 bits (155), Expect(2) = 3e-11
 Identities = 33/79 (41%), Positives = 40/79 (50%)
 Frame = -2

Query: 281 VACSPTDSTLVAAGGSGTGAFLWNINQGDQRQVIIGHXXXXXXXXXXXDGKFLACGTGQG 102
           VACSP D  LVA GG     F+W I  GD    + GH           DG+ LA G+  G
Sbjct: 67  VACSPIDPRLVATGGGDDKGFIWKILDGDWAFELGGHKDSVFSLDFSMDGQLLASGSFDG 126

Query: 101 RVQVWDICSSSHKCTFDGP 45
            V++WD  S   KCT +GP
Sbjct: 127 LVKIWDASSGDLKCTLEGP 145



 Score = 28.5 bits (62), Expect(2) = 3e-11
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -3

Query: 37  LRWHPRGHFVLA 2
           +RWHPRGH VLA
Sbjct: 152 VRWHPRGHVVLA 163


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