BLASTX nr result
ID: Coptis25_contig00032224
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00032224 (330 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABS32230.1| transducin family protein [Carica papaya] gi|1645... 77 4e-15 ref|XP_004138371.1| PREDICTED: vegetative incompatibility protei... 73 7e-14 ref|XP_004162166.1| PREDICTED: vegetative incompatibility protei... 72 1e-13 ref|XP_002326013.1| predicted protein [Populus trichocarpa] gi|2... 73 3e-11 ref|XP_002282186.1| PREDICTED: angio-associated migratory cell p... 64 3e-11 >gb|ABS32230.1| transducin family protein [Carica papaya] gi|164522082|gb|ABY60781.1| transducin family protein [Carica papaya] Length = 408 Score = 77.0 bits (188), Expect(2) = 4e-15 Identities = 38/81 (46%), Positives = 46/81 (56%) Frame = -2 Query: 284 AVACSPTDSTLVAAGGSGTGAFLWNINQGDQRQVIIGHXXXXXXXXXXXDGKFLACGTGQ 105 AVACSPTD+ LVA GG FLW I +GD ++GH DG+FLA G Sbjct: 65 AVACSPTDARLVATGGGDDKGFLWKIGRGDWGSELLGHKDSVSCLAFSTDGQFLASGGLD 124 Query: 104 GRVQVWDICSSSHKCTFDGPE 42 G VQ+WD S + KC +GPE Sbjct: 125 GLVQIWDASSGNIKCALEGPE 145 Score = 28.9 bits (63), Expect(2) = 4e-15 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = -3 Query: 37 LRWHPRGHFVLA 2 +RWHPRGH VLA Sbjct: 151 VRWHPRGHLVLA 162 >ref|XP_004138371.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Cucumis sativus] Length = 392 Score = 72.8 bits (177), Expect(2) = 7e-14 Identities = 34/82 (41%), Positives = 45/82 (54%) Frame = -2 Query: 290 ICAVACSPTDSTLVAAGGSGTGAFLWNINQGDQRQVIIGHXXXXXXXXXXXDGKFLACGT 111 + V CSP D+TLVA GG F+W I +GD Q + GH DG+ LA G+ Sbjct: 65 VYTVVCSPVDATLVATGGGDDKGFMWKIGRGDFAQELSGHKDSVSSLAFSADGQLLASGS 124 Query: 110 GQGRVQVWDICSSSHKCTFDGP 45 G +Q+WD S + KCT +GP Sbjct: 125 FDGIIQIWDTSSGNLKCTLEGP 146 Score = 28.9 bits (63), Expect(2) = 7e-14 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = -3 Query: 37 LRWHPRGHFVLA 2 +RWHPRGH VLA Sbjct: 153 VRWHPRGHLVLA 164 >ref|XP_004162166.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Cucumis sativus] Length = 392 Score = 72.4 bits (176), Expect(2) = 1e-13 Identities = 34/82 (41%), Positives = 45/82 (54%) Frame = -2 Query: 290 ICAVACSPTDSTLVAAGGSGTGAFLWNINQGDQRQVIIGHXXXXXXXXXXXDGKFLACGT 111 + V CSP D+TLVA GG F+W I +GD Q + GH DG+ LA G+ Sbjct: 65 VYTVVCSPLDATLVATGGGDDKGFMWKIGRGDFAQELSGHKDSVSSLAFSADGQLLASGS 124 Query: 110 GQGRVQVWDICSSSHKCTFDGP 45 G +Q+WD S + KCT +GP Sbjct: 125 FDGIIQIWDTSSGNLKCTLEGP 146 Score = 28.9 bits (63), Expect(2) = 1e-13 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = -3 Query: 37 LRWHPRGHFVLA 2 +RWHPRGH VLA Sbjct: 153 VRWHPRGHLVLA 164 >ref|XP_002326013.1| predicted protein [Populus trichocarpa] gi|222862888|gb|EEF00395.1| predicted protein [Populus trichocarpa] Length = 390 Score = 72.8 bits (177), Expect = 3e-11 Identities = 35/81 (43%), Positives = 43/81 (53%) Frame = -2 Query: 281 VACSPTDSTLVAAGGSGTGAFLWNINQGDQRQVIIGHXXXXXXXXXXXDGKFLACGTGQG 102 V+CSPTD LVA GG FLW I GD + GH DG+ LA G G Sbjct: 66 VSCSPTDPLLVATGGGDDKGFLWKIGLGDWASELKGHKDSVSCLAFSSDGQLLASGGFDG 125 Query: 101 RVQVWDICSSSHKCTFDGPED 39 VQ+WD S +HKC +GP++ Sbjct: 126 LVQIWDASSGNHKCVLEGPDE 146 >ref|XP_002282186.1| PREDICTED: angio-associated migratory cell protein-like [Vitis vinifera] Length = 391 Score = 64.3 bits (155), Expect(2) = 3e-11 Identities = 33/79 (41%), Positives = 40/79 (50%) Frame = -2 Query: 281 VACSPTDSTLVAAGGSGTGAFLWNINQGDQRQVIIGHXXXXXXXXXXXDGKFLACGTGQG 102 VACSP D LVA GG F+W I GD + GH DG+ LA G+ G Sbjct: 67 VACSPIDPRLVATGGGDDKGFIWKILDGDWAFELGGHKDSVFSLDFSMDGQLLASGSFDG 126 Query: 101 RVQVWDICSSSHKCTFDGP 45 V++WD S KCT +GP Sbjct: 127 LVKIWDASSGDLKCTLEGP 145 Score = 28.5 bits (62), Expect(2) = 3e-11 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = -3 Query: 37 LRWHPRGHFVLA 2 +RWHPRGH VLA Sbjct: 152 VRWHPRGHVVLA 163