BLASTX nr result
ID: Coptis25_contig00032219
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00032219 (276 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281160.2| PREDICTED: thioredoxin-related transmembrane... 102 4e-20 emb|CBI20839.3| unnamed protein product [Vitis vinifera] 102 4e-20 ref|XP_002516513.1| conserved hypothetical protein [Ricinus comm... 85 7e-15 ref|XP_002309539.1| predicted protein [Populus trichocarpa] gi|1... 85 7e-15 gb|ABK25402.1| unknown [Picea sitchensis] 81 8e-14 >ref|XP_002281160.2| PREDICTED: thioredoxin-related transmembrane protein 2 [Vitis vinifera] Length = 262 Score = 102 bits (253), Expect = 4e-20 Identities = 52/90 (57%), Positives = 61/90 (67%) Frame = +1 Query: 1 VSEPXXXXXXXXXXXXXXXRISISQYLSPHFSTRLIHREIQSLLTFLVLTVIKLVKEETW 180 VSEP R S SQ LSPH RL HREIQ++L F VL VIK+VKEETW Sbjct: 20 VSEPYYLFHFLAFFSYFVVRSSASQVLSPHILHRLFHREIQAILAFSVLAVIKVVKEETW 79 Query: 181 EGFIADALFFAKGFLIVVTLILDFHLALCY 270 EGFI+D LFFAK FL+ ++LI+D+HLAL Y Sbjct: 80 EGFISDTLFFAKVFLVAISLIMDYHLALWY 109 >emb|CBI20839.3| unnamed protein product [Vitis vinifera] Length = 257 Score = 102 bits (253), Expect = 4e-20 Identities = 52/90 (57%), Positives = 61/90 (67%) Frame = +1 Query: 1 VSEPXXXXXXXXXXXXXXXRISISQYLSPHFSTRLIHREIQSLLTFLVLTVIKLVKEETW 180 VSEP R S SQ LSPH RL HREIQ++L F VL VIK+VKEETW Sbjct: 15 VSEPYYLFHFLAFFSYFVVRSSASQVLSPHILHRLFHREIQAILAFSVLAVIKVVKEETW 74 Query: 181 EGFIADALFFAKGFLIVVTLILDFHLALCY 270 EGFI+D LFFAK FL+ ++LI+D+HLAL Y Sbjct: 75 EGFISDTLFFAKVFLVAISLIMDYHLALWY 104 >ref|XP_002516513.1| conserved hypothetical protein [Ricinus communis] gi|223544333|gb|EEF45854.1| conserved hypothetical protein [Ricinus communis] Length = 263 Score = 84.7 bits (208), Expect = 7e-15 Identities = 46/90 (51%), Positives = 54/90 (60%) Frame = +1 Query: 1 VSEPXXXXXXXXXXXXXXXRISISQYLSPHFSTRLIHREIQSLLTFLVLTVIKLVKEETW 180 VSEP RIS S LSP + L++RE Q+ L VL IKLVKEETW Sbjct: 21 VSEPYYLFHFLAFFSYLVVRISSSSLLSPPIAHHLLYREFQAFLALSVLASIKLVKEETW 80 Query: 181 EGFIADALFFAKGFLIVVTLILDFHLALCY 270 E FIAD LF+AK L+ V+LILD+HL L Y Sbjct: 81 EAFIADVLFYAKLLLVAVSLILDYHLTLWY 110 >ref|XP_002309539.1| predicted protein [Populus trichocarpa] gi|118487276|gb|ABK95466.1| unknown [Populus trichocarpa] gi|222855515|gb|EEE93062.1| predicted protein [Populus trichocarpa] Length = 247 Score = 84.7 bits (208), Expect = 7e-15 Identities = 42/92 (45%), Positives = 58/92 (63%) Frame = +1 Query: 1 VSEPXXXXXXXXXXXXXXXRISISQYLSPHFSTRLIHREIQSLLTFLVLTVIKLVKEETW 180 +SEP R S + LSPH RL +REIQ++L F +L K+V++ETW Sbjct: 6 LSEPYYLLHFLTFFSYLITRTSATSLLSPHLIHRLFYREIQAVLAFALLATYKIVRDETW 65 Query: 181 EGFIADALFFAKGFLIVVTLILDFHLALCYGV 276 E FI++ LFFAK FL+ ++LI+D+HLAL Y V Sbjct: 66 EAFISNMLFFAKIFLVAISLIMDYHLALWYMV 97 >gb|ABK25402.1| unknown [Picea sitchensis] Length = 259 Score = 81.3 bits (199), Expect = 8e-14 Identities = 45/92 (48%), Positives = 57/92 (61%) Frame = +1 Query: 1 VSEPXXXXXXXXXXXXXXXRISISQYLSPHFSTRLIHREIQSLLTFLVLTVIKLVKEETW 180 V+EP R S +++LS FS LI REIQ+LLTF VL IK+VK +TW Sbjct: 16 VTEPFYAFHGLTFFSYFVIRQSTAEFLSEGFSYHLIRREIQTLLTFGVLVAIKMVKSKTW 75 Query: 181 EGFIADALFFAKGFLIVVTLILDFHLALCYGV 276 E FIAD + +AKGFLI++T IL+ LA Y V Sbjct: 76 EAFIADTMLYAKGFLIMLTFILNHCLAFWYVV 107