BLASTX nr result

ID: Coptis25_contig00032219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032219
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281160.2| PREDICTED: thioredoxin-related transmembrane...   102   4e-20
emb|CBI20839.3| unnamed protein product [Vitis vinifera]              102   4e-20
ref|XP_002516513.1| conserved hypothetical protein [Ricinus comm...    85   7e-15
ref|XP_002309539.1| predicted protein [Populus trichocarpa] gi|1...    85   7e-15
gb|ABK25402.1| unknown [Picea sitchensis]                              81   8e-14

>ref|XP_002281160.2| PREDICTED: thioredoxin-related transmembrane protein 2 [Vitis
           vinifera]
          Length = 262

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/90 (57%), Positives = 61/90 (67%)
 Frame = +1

Query: 1   VSEPXXXXXXXXXXXXXXXRISISQYLSPHFSTRLIHREIQSLLTFLVLTVIKLVKEETW 180
           VSEP               R S SQ LSPH   RL HREIQ++L F VL VIK+VKEETW
Sbjct: 20  VSEPYYLFHFLAFFSYFVVRSSASQVLSPHILHRLFHREIQAILAFSVLAVIKVVKEETW 79

Query: 181 EGFIADALFFAKGFLIVVTLILDFHLALCY 270
           EGFI+D LFFAK FL+ ++LI+D+HLAL Y
Sbjct: 80  EGFISDTLFFAKVFLVAISLIMDYHLALWY 109


>emb|CBI20839.3| unnamed protein product [Vitis vinifera]
          Length = 257

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/90 (57%), Positives = 61/90 (67%)
 Frame = +1

Query: 1   VSEPXXXXXXXXXXXXXXXRISISQYLSPHFSTRLIHREIQSLLTFLVLTVIKLVKEETW 180
           VSEP               R S SQ LSPH   RL HREIQ++L F VL VIK+VKEETW
Sbjct: 15  VSEPYYLFHFLAFFSYFVVRSSASQVLSPHILHRLFHREIQAILAFSVLAVIKVVKEETW 74

Query: 181 EGFIADALFFAKGFLIVVTLILDFHLALCY 270
           EGFI+D LFFAK FL+ ++LI+D+HLAL Y
Sbjct: 75  EGFISDTLFFAKVFLVAISLIMDYHLALWY 104


>ref|XP_002516513.1| conserved hypothetical protein [Ricinus communis]
           gi|223544333|gb|EEF45854.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 263

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 46/90 (51%), Positives = 54/90 (60%)
 Frame = +1

Query: 1   VSEPXXXXXXXXXXXXXXXRISISQYLSPHFSTRLIHREIQSLLTFLVLTVIKLVKEETW 180
           VSEP               RIS S  LSP  +  L++RE Q+ L   VL  IKLVKEETW
Sbjct: 21  VSEPYYLFHFLAFFSYLVVRISSSSLLSPPIAHHLLYREFQAFLALSVLASIKLVKEETW 80

Query: 181 EGFIADALFFAKGFLIVVTLILDFHLALCY 270
           E FIAD LF+AK  L+ V+LILD+HL L Y
Sbjct: 81  EAFIADVLFYAKLLLVAVSLILDYHLTLWY 110


>ref|XP_002309539.1| predicted protein [Populus trichocarpa] gi|118487276|gb|ABK95466.1|
           unknown [Populus trichocarpa]
           gi|222855515|gb|EEE93062.1| predicted protein [Populus
           trichocarpa]
          Length = 247

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/92 (45%), Positives = 58/92 (63%)
 Frame = +1

Query: 1   VSEPXXXXXXXXXXXXXXXRISISQYLSPHFSTRLIHREIQSLLTFLVLTVIKLVKEETW 180
           +SEP               R S +  LSPH   RL +REIQ++L F +L   K+V++ETW
Sbjct: 6   LSEPYYLLHFLTFFSYLITRTSATSLLSPHLIHRLFYREIQAVLAFALLATYKIVRDETW 65

Query: 181 EGFIADALFFAKGFLIVVTLILDFHLALCYGV 276
           E FI++ LFFAK FL+ ++LI+D+HLAL Y V
Sbjct: 66  EAFISNMLFFAKIFLVAISLIMDYHLALWYMV 97


>gb|ABK25402.1| unknown [Picea sitchensis]
          Length = 259

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 45/92 (48%), Positives = 57/92 (61%)
 Frame = +1

Query: 1   VSEPXXXXXXXXXXXXXXXRISISQYLSPHFSTRLIHREIQSLLTFLVLTVIKLVKEETW 180
           V+EP               R S +++LS  FS  LI REIQ+LLTF VL  IK+VK +TW
Sbjct: 16  VTEPFYAFHGLTFFSYFVIRQSTAEFLSEGFSYHLIRREIQTLLTFGVLVAIKMVKSKTW 75

Query: 181 EGFIADALFFAKGFLIVVTLILDFHLALCYGV 276
           E FIAD + +AKGFLI++T IL+  LA  Y V
Sbjct: 76  EAFIADTMLYAKGFLIMLTFILNHCLAFWYVV 107


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