BLASTX nr result

ID: Coptis25_contig00032216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032216
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265516.2| PREDICTED: uncharacterized protein LOC100257...   115   4e-24
emb|CBI31898.3| unnamed protein product [Vitis vinifera]              115   4e-24
emb|CAN64504.1| hypothetical protein VITISV_016997 [Vitis vinifera]   115   5e-24
ref|XP_002329911.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
ref|XP_003538725.1| PREDICTED: uncharacterized protein LOC100804...   106   2e-21

>ref|XP_002265516.2| PREDICTED: uncharacterized protein LOC100257409 [Vitis vinifera]
          Length = 286

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/87 (66%), Positives = 65/87 (74%), Gaps = 5/87 (5%)
 Frame = +1

Query: 19  RSSDPFFPTLTELPEENPSHNVVRIIFHTSWSPVNSFSGRIEMVLKVNNPPRTVTRFEEY 198
           R + PFFP L E+PE +PS NVV IIFHTSWSP  +FSGRIEM+ KV N PRTVTRFEEY
Sbjct: 93  RPAAPFFPALAEMPEGHPSRNVVEIIFHTSWSP-KAFSGRIEMIFKVQNLPRTVTRFEEY 151

Query: 199 RHVVKCRVGSG-----DGGRCLADGNE 264
           R +VK R GSG     D  RC+ADGNE
Sbjct: 152 REMVKSRAGSGGGTWEDDARCVADGNE 178


>emb|CBI31898.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/87 (66%), Positives = 65/87 (74%), Gaps = 5/87 (5%)
 Frame = +1

Query: 19  RSSDPFFPTLTELPEENPSHNVVRIIFHTSWSPVNSFSGRIEMVLKVNNPPRTVTRFEEY 198
           R + PFFP L E+PE +PS NVV IIFHTSWSP  +FSGRIEM+ KV N PRTVTRFEEY
Sbjct: 81  RPAAPFFPALAEMPEGHPSRNVVEIIFHTSWSP-KAFSGRIEMIFKVQNLPRTVTRFEEY 139

Query: 199 RHVVKCRVGSG-----DGGRCLADGNE 264
           R +VK R GSG     D  RC+ADGNE
Sbjct: 140 REMVKSRAGSGGGTWEDDARCVADGNE 166


>emb|CAN64504.1| hypothetical protein VITISV_016997 [Vitis vinifera]
          Length = 317

 Score =  115 bits (287), Expect = 5e-24
 Identities = 58/87 (66%), Positives = 65/87 (74%), Gaps = 5/87 (5%)
 Frame = +1

Query: 19  RSSDPFFPTLTELPEENPSHNVVRIIFHTSWSPVNSFSGRIEMVLKVNNPPRTVTRFEEY 198
           R + PFFP L E+PE +PS NVV IIFHTSWSP  +FSGRIEM+ KV N PRTVTRFEEY
Sbjct: 93  RPAAPFFPALXEMPEGHPSRNVVEIIFHTSWSP-KAFSGRIEMIFKVQNLPRTVTRFEEY 151

Query: 199 RHVVKCRVGSG-----DGGRCLADGNE 264
           R +VK R GSG     D  RC+ADGNE
Sbjct: 152 REMVKSRAGSGGGTWEDDARCVADGNE 178


>ref|XP_002329911.1| predicted protein [Populus trichocarpa] gi|222871148|gb|EEF08279.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/88 (63%), Positives = 61/88 (69%), Gaps = 6/88 (6%)
 Frame = +1

Query: 19  RSSDPFFPTLTELPEENPSHNVVRIIFHTSWSPVNSFSGRIEMVLKVNNPPRTVTRFEEY 198
           R+ DP FP L ELPE +PS NVV IIFHTSWS   SF GRIEM+ KV N PRTVTRFEEY
Sbjct: 83  RNPDPVFPVLAELPEGHPSRNVVEIIFHTSWSN-KSFPGRIEMIFKVQNGPRTVTRFEEY 141

Query: 199 RHVVKCRVGSGDG------GRCLADGNE 264
           R +VK R G   G       RC+ADGNE
Sbjct: 142 RDIVKTRAGLSGGTTWEENARCVADGNE 169


>ref|XP_003538725.1| PREDICTED: uncharacterized protein LOC100804686 [Glycine max]
          Length = 285

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/91 (59%), Positives = 64/91 (70%), Gaps = 6/91 (6%)
 Frame = +1

Query: 10  TNKRSSDPFFPTLTELPEENPSHNVVRIIFHTSWSPVNSFSGRIEMVLKVNNPPRTVTRF 189
           T  R +DP FP+LTEL E +PS NVV IIFHTSW P   FSG +EM+ KV+N PRTV+RF
Sbjct: 87  TATRHADPRFPSLTELTEGHPSRNVVEIIFHTSWGP-KPFSGLVEMIFKVHNGPRTVSRF 145

Query: 190 EEYRHVVKCRVGSG------DGGRCLADGNE 264
           EEYR  VK R G+G      +  RC+ADGNE
Sbjct: 146 EEYREAVKVRAGTGPAHDYEENARCVADGNE 176


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