BLASTX nr result

ID: Coptis25_contig00032214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032214
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138545.1| PREDICTED: protein SET DOMAIN GROUP 41-like ...    60   1e-07
ref|XP_004166625.1| PREDICTED: LOW QUALITY PROTEIN: protein SET ...    59   3e-07
ref|XP_002265243.2| PREDICTED: protein SET DOMAIN GROUP 41-like ...    56   3e-06
emb|CBI18219.3| unnamed protein product [Vitis vinifera]               56   3e-06

>ref|XP_004138545.1| PREDICTED: protein SET DOMAIN GROUP 41-like [Cucumis sativus]
          Length = 659

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 41/125 (32%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
 Frame = -1

Query: 328 CWLMEKLVADIVCDQPLSILTEIEFEEVSKCFFNCVTRLSVKVWSFLIQGRHYFEDITDP 149
           C  +++  A  +  QP+    + +F E S    NC+  +S K WS L  G  Y +  T P
Sbjct: 521 CSWVDEFNASRIHGQPV----QADFREFSIGISNCIASISQKCWSSLTHGCPYLKAFTGP 576

Query: 148 IDFGWLETRNS---GLGVSHARVSS---TFCGLRCETQECNYEE----------MEYGGY 17
            DF W +T      G G+ H+   S     C L C+ Q+ N E           + YGGY
Sbjct: 577 FDFSWPKTNEQDICGRGIDHSCACSKTQDVC-LECKPQDSNQERESISGLGIHCLYYGGY 635

Query: 16  LASIC 2
           LASIC
Sbjct: 636 LASIC 640


>ref|XP_004166625.1| PREDICTED: LOW QUALITY PROTEIN: protein SET DOMAIN GROUP 41-like
           [Cucumis sativus]
          Length = 596

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/104 (35%), Positives = 48/104 (46%), Gaps = 16/104 (15%)
 Frame = -1

Query: 265 EIEFEEVSKCFFNCVTRLSVKVWSFLIQGRHYFEDITDPIDFGWLETRNS---GLGVSHA 95
           + +F E S    NC+  +S K WS L  G  Y +  T P DF W +T      G G+ H+
Sbjct: 475 QADFREFSIGISNCIASISQKCWSSLTHGCPYLKAFTGPFDFSWPKTNEQDICGRGIDHS 534

Query: 94  RVSS---TFCGLRCETQECNYEE----------MEYGGYLASIC 2
              S     C L C+ Q+ N E           + YGGYLASIC
Sbjct: 535 CACSKTQDVC-LECKPQDSNQERESISGLGIHCLYYGGYLASIC 577


>ref|XP_002265243.2| PREDICTED: protein SET DOMAIN GROUP 41-like [Vitis vinifera]
          Length = 660

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 36/105 (34%), Positives = 47/105 (44%), Gaps = 21/105 (20%)
 Frame = -1

Query: 253 EEVSKCFFNCVTRLSVKVWSFLIQGRHYFEDITDPIDFGWL---ETRNSGLGVSHARVSS 83
           E +SK F NCV+ ++ KVWSFLIQG H  +   DPID  WL   ET       +H+  ++
Sbjct: 526 ENISKQFLNCVSSITPKVWSFLIQGHHLCKKFKDPIDSNWLQKMETSKIWGFQAHSGCTA 585

Query: 82  TFCGLRCETQECNYEEME------------------YGGYLASIC 2
                  E     YE                     YGG+L+SIC
Sbjct: 586 MDSSSWDEESTGGYEAQRDTNQERKNLFKLGIHCLLYGGFLSSIC 630


>emb|CBI18219.3| unnamed protein product [Vitis vinifera]
          Length = 533

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 36/105 (34%), Positives = 47/105 (44%), Gaps = 21/105 (20%)
 Frame = -1

Query: 253 EEVSKCFFNCVTRLSVKVWSFLIQGRHYFEDITDPIDFGWL---ETRNSGLGVSHARVSS 83
           E +SK F NCV+ ++ KVWSFLIQG H  +   DPID  WL   ET       +H+  ++
Sbjct: 389 ENISKQFLNCVSSITPKVWSFLIQGHHLCKKFKDPIDSNWLQKMETSKIWGFQAHSGCTA 448

Query: 82  TFCGLRCETQECNYEEME------------------YGGYLASIC 2
                  E     YE                     YGG+L+SIC
Sbjct: 449 MDSSSWDEESTGGYEAQRDTNQERKNLFKLGIHCLLYGGFLSSIC 493


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