BLASTX nr result
ID: Coptis25_contig00032199
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00032199 (462 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFQ55276.1| URT reporter protein [URT cloning vector pKP77] 117 1e-24 gb|EJW81643.1| ubiquitin/40S ribosomal protein S27a fusion prote... 113 2e-23 emb|CBK25005.2| unnamed protein product [Blastocystis hominis] 112 3e-23 ref|XP_002850573.1| ubiquitin-40S ribosomal protein S31 fusion p... 112 4e-23 gb|ACO12940.1| Ubiquitin [Lepeophtheirus salmonis] 112 4e-23 >gb|AFQ55276.1| URT reporter protein [URT cloning vector pKP77] Length = 361 Score = 117 bits (292), Expect = 1e-24 Identities = 60/103 (58%), Positives = 75/103 (72%), Gaps = 4/103 (3%) Frame = +2 Query: 107 TMEILVSTQTGKQITFQVQSSNTIEILKTKVHDKEGIPPDQQRLFFSGKHLQDGRTLSDY 286 TM+I V T TGK IT +V+SS+TI+ +K+K+ DKEGIPPDQQRL F+G+ L+DGRTLSDY Sbjct: 245 TMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGRQLEDGRTLSDY 304 Query: 287 NIQNGSVVFLVLRLRGGGNTLYNSSEYVQSD----GSTESDDD 403 NIQ S + LVLRLRGG + + S+Y D GS DDD Sbjct: 305 NIQKESTLHLVLRLRGGRDLGLSGSDYKDDDDKGSGSDYKDDD 347 >gb|EJW81643.1| ubiquitin/40S ribosomal protein S27a fusion protein [Wuchereria bancrofti] Length = 162 Score = 113 bits (282), Expect = 2e-23 Identities = 55/77 (71%), Positives = 64/77 (83%) Frame = +2 Query: 110 MEILVSTQTGKQITFQVQSSNTIEILKTKVHDKEGIPPDQQRLFFSGKHLQDGRTLSDYN 289 M+I V T TGK IT +V+SS+TIE +KTK+ DKEGIPPDQQRL F+GK L+DGRTLSDYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 Query: 290 IQNGSVVFLVLRLRGGG 340 IQ S + LVLRLRGGG Sbjct: 61 IQKESTLHLVLRLRGGG 77 >emb|CBK25005.2| unnamed protein product [Blastocystis hominis] Length = 183 Score = 112 bits (280), Expect = 3e-23 Identities = 55/78 (70%), Positives = 63/78 (80%) Frame = +2 Query: 107 TMEILVSTQTGKQITFQVQSSNTIEILKTKVHDKEGIPPDQQRLFFSGKHLQDGRTLSDY 286 TM+I V T TGK IT V+SS+TIE +K K+ DKEGIPPDQQRL F+GK L+DGRTLSDY Sbjct: 36 TMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 95 Query: 287 NIQNGSVVFLVLRLRGGG 340 NIQ S + LVLRLRGGG Sbjct: 96 NIQKESTLHLVLRLRGGG 113 >ref|XP_002850573.1| ubiquitin-40S ribosomal protein S31 fusion protein [Arthroderma otae CBS 113480] gi|302508071|ref|XP_003015996.1| hypothetical protein ARB_05393 [Arthroderma benhamiae CBS 112371] gi|302661670|ref|XP_003022500.1| polyubiquitin UbiD/Ubi4, putative [Trichophyton verrucosum HKI 0517] gi|315055675|ref|XP_003177212.1| ubiquitin-40S ribosomal protein S31 fusion protein [Arthroderma gypseum CBS 118893] gi|238838127|gb|EEQ27789.1| ubiquitin [Arthroderma otae CBS 113480] gi|291179565|gb|EFE35351.1| hypothetical protein ARB_05393 [Arthroderma benhamiae CBS 112371] gi|291186448|gb|EFE41882.1| polyubiquitin UbiD/Ubi4, putative [Trichophyton verrucosum HKI 0517] gi|311339058|gb|EFQ98260.1| hypothetical protein MGYG_01295 [Arthroderma gypseum CBS 118893] gi|326474317|gb|EGD98326.1| ubiquitin [Trichophyton tonsurans CBS 112818] gi|326482533|gb|EGE06543.1| UBI1 [Trichophyton equinum CBS 127.97] Length = 154 Score = 112 bits (279), Expect = 4e-23 Identities = 54/77 (70%), Positives = 64/77 (83%) Frame = +2 Query: 110 MEILVSTQTGKQITFQVQSSNTIEILKTKVHDKEGIPPDQQRLFFSGKHLQDGRTLSDYN 289 M+I V T TGK IT +V+SS+TI+ +KTK+ DKEGIPPDQQRL F+GK L+DGRTLSDYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 Query: 290 IQNGSVVFLVLRLRGGG 340 IQ S + LVLRLRGGG Sbjct: 61 IQKESTLHLVLRLRGGG 77 >gb|ACO12940.1| Ubiquitin [Lepeophtheirus salmonis] Length = 155 Score = 112 bits (279), Expect = 4e-23 Identities = 54/77 (70%), Positives = 64/77 (83%) Frame = +2 Query: 110 MEILVSTQTGKQITFQVQSSNTIEILKTKVHDKEGIPPDQQRLFFSGKHLQDGRTLSDYN 289 M+I V T TGK IT +V++S+TIE +KTK+ DKEGIPPDQQRL F+GK L+DGRTLSDYN Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 Query: 290 IQNGSVVFLVLRLRGGG 340 IQ S + LVLRLRGGG Sbjct: 61 IQKESTLHLVLRLRGGG 77