BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032199
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFQ55276.1| URT reporter protein [URT cloning vector pKP77]        117   1e-24
gb|EJW81643.1| ubiquitin/40S ribosomal protein S27a fusion prote...   113   2e-23
emb|CBK25005.2| unnamed protein product [Blastocystis hominis]        112   3e-23
ref|XP_002850573.1| ubiquitin-40S ribosomal protein S31 fusion p...   112   4e-23
gb|ACO12940.1| Ubiquitin [Lepeophtheirus salmonis]                    112   4e-23

>gb|AFQ55276.1| URT reporter protein [URT cloning vector pKP77]
          Length = 361

 Score =  117 bits (292), Expect = 1e-24
 Identities = 60/103 (58%), Positives = 75/103 (72%), Gaps = 4/103 (3%)
 Frame = +2

Query: 107 TMEILVSTQTGKQITFQVQSSNTIEILKTKVHDKEGIPPDQQRLFFSGKHLQDGRTLSDY 286
           TM+I V T TGK IT +V+SS+TI+ +K+K+ DKEGIPPDQQRL F+G+ L+DGRTLSDY
Sbjct: 245 TMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGRQLEDGRTLSDY 304

Query: 287 NIQNGSVVFLVLRLRGGGNTLYNSSEYVQSD----GSTESDDD 403
           NIQ  S + LVLRLRGG +   + S+Y   D    GS   DDD
Sbjct: 305 NIQKESTLHLVLRLRGGRDLGLSGSDYKDDDDKGSGSDYKDDD 347


>gb|EJW81643.1| ubiquitin/40S ribosomal protein S27a fusion protein [Wuchereria
           bancrofti]
          Length = 162

 Score =  113 bits (282), Expect = 2e-23
 Identities = 55/77 (71%), Positives = 64/77 (83%)
 Frame = +2

Query: 110 MEILVSTQTGKQITFQVQSSNTIEILKTKVHDKEGIPPDQQRLFFSGKHLQDGRTLSDYN 289
           M+I V T TGK IT +V+SS+TIE +KTK+ DKEGIPPDQQRL F+GK L+DGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 290 IQNGSVVFLVLRLRGGG 340
           IQ  S + LVLRLRGGG
Sbjct: 61  IQKESTLHLVLRLRGGG 77


>emb|CBK25005.2| unnamed protein product [Blastocystis hominis]
          Length = 183

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/78 (70%), Positives = 63/78 (80%)
 Frame = +2

Query: 107 TMEILVSTQTGKQITFQVQSSNTIEILKTKVHDKEGIPPDQQRLFFSGKHLQDGRTLSDY 286
           TM+I V T TGK IT  V+SS+TIE +K K+ DKEGIPPDQQRL F+GK L+DGRTLSDY
Sbjct: 36  TMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 95

Query: 287 NIQNGSVVFLVLRLRGGG 340
           NIQ  S + LVLRLRGGG
Sbjct: 96  NIQKESTLHLVLRLRGGG 113


>ref|XP_002850573.1| ubiquitin-40S ribosomal protein S31 fusion protein [Arthroderma
           otae CBS 113480] gi|302508071|ref|XP_003015996.1|
           hypothetical protein ARB_05393 [Arthroderma benhamiae
           CBS 112371] gi|302661670|ref|XP_003022500.1|
           polyubiquitin UbiD/Ubi4, putative [Trichophyton
           verrucosum HKI 0517] gi|315055675|ref|XP_003177212.1|
           ubiquitin-40S ribosomal protein S31 fusion protein
           [Arthroderma gypseum CBS 118893]
           gi|238838127|gb|EEQ27789.1| ubiquitin [Arthroderma otae
           CBS 113480] gi|291179565|gb|EFE35351.1| hypothetical
           protein ARB_05393 [Arthroderma benhamiae CBS 112371]
           gi|291186448|gb|EFE41882.1| polyubiquitin UbiD/Ubi4,
           putative [Trichophyton verrucosum HKI 0517]
           gi|311339058|gb|EFQ98260.1| hypothetical protein
           MGYG_01295 [Arthroderma gypseum CBS 118893]
           gi|326474317|gb|EGD98326.1| ubiquitin [Trichophyton
           tonsurans CBS 112818] gi|326482533|gb|EGE06543.1| UBI1
           [Trichophyton equinum CBS 127.97]
          Length = 154

 Score =  112 bits (279), Expect = 4e-23
 Identities = 54/77 (70%), Positives = 64/77 (83%)
 Frame = +2

Query: 110 MEILVSTQTGKQITFQVQSSNTIEILKTKVHDKEGIPPDQQRLFFSGKHLQDGRTLSDYN 289
           M+I V T TGK IT +V+SS+TI+ +KTK+ DKEGIPPDQQRL F+GK L+DGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 290 IQNGSVVFLVLRLRGGG 340
           IQ  S + LVLRLRGGG
Sbjct: 61  IQKESTLHLVLRLRGGG 77


>gb|ACO12940.1| Ubiquitin [Lepeophtheirus salmonis]
          Length = 155

 Score =  112 bits (279), Expect = 4e-23
 Identities = 54/77 (70%), Positives = 64/77 (83%)
 Frame = +2

Query: 110 MEILVSTQTGKQITFQVQSSNTIEILKTKVHDKEGIPPDQQRLFFSGKHLQDGRTLSDYN 289
           M+I V T TGK IT +V++S+TIE +KTK+ DKEGIPPDQQRL F+GK L+DGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 290 IQNGSVVFLVLRLRGGG 340
           IQ  S + LVLRLRGGG
Sbjct: 61  IQKESTLHLVLRLRGGG 77