BLASTX nr result

ID: Coptis25_contig00032195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032195
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like...   312   2e-83
emb|CBI29756.3| unnamed protein product [Vitis vinifera]              308   4e-82
ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like...   308   4e-82
ref|XP_003592989.1| ATP-dependent DNA helicase Q1 [Medicago trun...   305   2e-81
ref|XP_003539402.1| PREDICTED: ATP-dependent DNA helicase Q-like...   303   1e-80

>ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
            [Cucumis sativus] gi|449511185|ref|XP_004163888.1|
            PREDICTED: ATP-dependent DNA helicase Q-like 4A-like,
            partial [Cucumis sativus]
          Length = 1269

 Score =  312 bits (800), Expect = 2e-83
 Identities = 147/172 (85%), Positives = 157/172 (91%)
 Frame = -3

Query: 518  TPEKVAKSDVLLRHLESLNARDLLSRIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNTP 339
            TPEKVAKSDVLLRHLESLNAR LL+RIVIDEAHCVSQWGHDFRPDYQ LGILKQKFP  P
Sbjct: 616  TPEKVAKSDVLLRHLESLNARHLLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPKIP 675

Query: 338  VXXXXXXXXASVKEDVVRALGLVNCIIFRQSFNRPNLLYSVIPKTKNCLDDIDKFVKENH 159
            V        ASVKEDVV+ALGL+NCIIFRQSFNRPNL YSVIPKTK C+DDIDKF+KENH
Sbjct: 676  VLALTATATASVKEDVVQALGLINCIIFRQSFNRPNLWYSVIPKTKKCVDDIDKFIKENH 735

Query: 158  FDECGIIYCLSRMDCEKVAEKLQECGHKASFYHGSMDPQQRTFVQKQWSKDE 3
            FDECGI+YCLSRMDCEKVAE+LQECGHKA+FYHGSMDP QR+F+QKQWSKDE
Sbjct: 736  FDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDPAQRSFIQKQWSKDE 787


>emb|CBI29756.3| unnamed protein product [Vitis vinifera]
          Length = 1235

 Score =  308 bits (788), Expect = 4e-82
 Identities = 144/172 (83%), Positives = 159/172 (92%)
 Frame = -3

Query: 518  TPEKVAKSDVLLRHLESLNARDLLSRIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNTP 339
            TPEKVAKSDVL+R+L++L+AR+LLSRIVIDEAHCVSQWGHDFRPDYQ LGILKQKFPNTP
Sbjct: 535  TPEKVAKSDVLMRNLDNLHARELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTP 594

Query: 338  VXXXXXXXXASVKEDVVRALGLVNCIIFRQSFNRPNLLYSVIPKTKNCLDDIDKFVKENH 159
            V        ASVKEDVV+ALGLVNCIIFRQSFNRPNL YSV+PKT+ CLDDIDKF++ENH
Sbjct: 595  VLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWYSVLPKTRKCLDDIDKFIRENH 654

Query: 158  FDECGIIYCLSRMDCEKVAEKLQECGHKASFYHGSMDPQQRTFVQKQWSKDE 3
            FDECGIIYCLSR+DCEKVAE+LQECGHKA+FYHGSMDP +R FVQKQWSKDE
Sbjct: 655  FDECGIIYCLSRLDCEKVAERLQECGHKAAFYHGSMDPARRAFVQKQWSKDE 706


>ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis vinifera]
          Length = 1224

 Score =  308 bits (788), Expect = 4e-82
 Identities = 144/172 (83%), Positives = 159/172 (92%)
 Frame = -3

Query: 518  TPEKVAKSDVLLRHLESLNARDLLSRIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNTP 339
            TPEKVAKSDVL+R+L++L+AR+LLSRIVIDEAHCVSQWGHDFRPDYQ LGILKQKFPNTP
Sbjct: 524  TPEKVAKSDVLMRNLDNLHARELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTP 583

Query: 338  VXXXXXXXXASVKEDVVRALGLVNCIIFRQSFNRPNLLYSVIPKTKNCLDDIDKFVKENH 159
            V        ASVKEDVV+ALGLVNCIIFRQSFNRPNL YSV+PKT+ CLDDIDKF++ENH
Sbjct: 584  VLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWYSVLPKTRKCLDDIDKFIRENH 643

Query: 158  FDECGIIYCLSRMDCEKVAEKLQECGHKASFYHGSMDPQQRTFVQKQWSKDE 3
            FDECGIIYCLSR+DCEKVAE+LQECGHKA+FYHGSMDP +R FVQKQWSKDE
Sbjct: 644  FDECGIIYCLSRLDCEKVAERLQECGHKAAFYHGSMDPARRAFVQKQWSKDE 695


>ref|XP_003592989.1| ATP-dependent DNA helicase Q1 [Medicago truncatula]
            gi|355482037|gb|AES63240.1| ATP-dependent DNA helicase Q1
            [Medicago truncatula]
          Length = 1156

 Score =  305 bits (782), Expect = 2e-81
 Identities = 142/172 (82%), Positives = 155/172 (90%)
 Frame = -3

Query: 518  TPEKVAKSDVLLRHLESLNARDLLSRIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNTP 339
            TPEKVA+SDVLLR LESL+ R+LLSRIVIDEAHCVSQWGHDFRPDYQ LG+LKQKFPNTP
Sbjct: 507  TPEKVARSDVLLRQLESLHGRELLSRIVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNTP 566

Query: 338  VXXXXXXXXASVKEDVVRALGLVNCIIFRQSFNRPNLLYSVIPKTKNCLDDIDKFVKENH 159
            V        ASVKEDVV+ALGLVNC++FRQSFNRPNL YSV+PKTK CL+DIDKF++ENH
Sbjct: 567  VLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTKKCLEDIDKFIRENH 626

Query: 158  FDECGIIYCLSRMDCEKVAEKLQECGHKASFYHGSMDPQQRTFVQKQWSKDE 3
            FDECGIIYCLSRMDCEKVAEKLQECGHK +FYHGSMDP QR  VQ+QWSKDE
Sbjct: 627  FDECGIIYCLSRMDCEKVAEKLQECGHKCAFYHGSMDPDQRAHVQRQWSKDE 678


>ref|XP_003539402.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Glycine max]
          Length = 1534

 Score =  303 bits (775), Expect = 1e-80
 Identities = 143/172 (83%), Positives = 155/172 (90%)
 Frame = -3

Query: 518  TPEKVAKSDVLLRHLESLNARDLLSRIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNTP 339
            TPEKVA+SD LLRHL++L+ R+LL+RIVIDEAHCVSQWGHDFRPDYQ LGILKQKFPNTP
Sbjct: 883  TPEKVARSDNLLRHLDNLHFRELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTP 942

Query: 338  VXXXXXXXXASVKEDVVRALGLVNCIIFRQSFNRPNLLYSVIPKTKNCLDDIDKFVKENH 159
            V        ASVKEDVV+ALGLVNCIIFRQSFNRPNL YSVIPKTK CL+DIDKF++ENH
Sbjct: 943  VLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLRYSVIPKTKKCLEDIDKFIRENH 1002

Query: 158  FDECGIIYCLSRMDCEKVAEKLQECGHKASFYHGSMDPQQRTFVQKQWSKDE 3
            FDECGI+YCLSRMDCEKVAEKLQECGHK +FYHGSMDP QR  VQKQWSKDE
Sbjct: 1003 FDECGIVYCLSRMDCEKVAEKLQECGHKCAFYHGSMDPVQRASVQKQWSKDE 1054


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